From f2c63192d1fd8ffa68ef4f7674ba9c86338c2009 Mon Sep 17 00:00:00 2001
From: John Beverley <johnbeve@buffalo.edu>
Date: Wed, 27 Nov 2024 23:26:07 -0500
Subject: [PATCH 1/3] makefile update to branch

---
 Makefile | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/Makefile b/Makefile
index 59189ff..281ba1b 100644
--- a/Makefile
+++ b/Makefile
@@ -83,7 +83,7 @@ $(ROBOT_FILE): setup
 reason-individual: $(ROBOT_FILE)
 	for file in $(DEV_FILES); do \
 		echo "Reasoning on $$file..."; \
-		java -jar $(ROBOT_FILE) reason --input $$file --reasoner HermiT; \
+		java -jar $(ROBOT_FILE) reason --input $$file --catalog src/cco-modules/catalog-v001.xml --reasoner HermiT; \
 	done
 
 # Test individual files
@@ -104,7 +104,7 @@ build-combined: $(combined-file)
 
 .PHONY: reason-combined test-combined
 reason-combined: $(combined-file) | $(ROBOT_FILE)
-	java -jar $(ROBOT_FILE) reason --input $(combined-file) --reasoner HermiT
+	java -jar $(ROBOT_FILE) reason --input $(combined-file) --catalog src/cco-modules/catalog-v001.xml --reasoner HermiT
 
 test-combined: $(combined-file) | $(ROBOT_FILE)
 	java -jar $(ROBOT_FILE) verify --input $(combined-file) --output-dir $(config.REPORTS_DIR) --queries $(QUERIES) --fail-on-violation false || true

From e2868978d6c693aa205a62fbb32a324d9b78f688 Mon Sep 17 00:00:00 2001
From: John Beverley <johnbeve@buffalo.edu>
Date: Wed, 27 Nov 2024 23:27:31 -0500
Subject: [PATCH 2/3] tst

---
 src/cco-modules/AgentOntology.ttl | 1 +
 1 file changed, 1 insertion(+)

diff --git a/src/cco-modules/AgentOntology.ttl b/src/cco-modules/AgentOntology.ttl
index 0a24b3f..7cfe3c7 100644
--- a/src/cco-modules/AgentOntology.ttl
+++ b/src/cco-modules/AgentOntology.ttl
@@ -25,6 +25,7 @@
 
 ###  http://purl.org/dc/terms/bibliographicCitation
 dcterms:bibliographicCitation rdf:type owl:AnnotationProperty .
+dcterms:bibliographicCitation rdf:type owl:AnnotationProperty .
 
 
 ###  http://purl.org/dc/terms/created

From defe501bd98390a2b8e98a37424b1d1017bf6c50 Mon Sep 17 00:00:00 2001
From: John Beverley <johnbeve@buffalo.edu>
Date: Wed, 27 Nov 2024 23:29:59 -0500
Subject: [PATCH 3/3] again

---
 src/cco-modules/AgentOntology.ttl | 2 --
 1 file changed, 2 deletions(-)

diff --git a/src/cco-modules/AgentOntology.ttl b/src/cco-modules/AgentOntology.ttl
index 7cfe3c7..cf1f451 100644
--- a/src/cco-modules/AgentOntology.ttl
+++ b/src/cco-modules/AgentOntology.ttl
@@ -25,8 +25,6 @@
 
 ###  http://purl.org/dc/terms/bibliographicCitation
 dcterms:bibliographicCitation rdf:type owl:AnnotationProperty .
-dcterms:bibliographicCitation rdf:type owl:AnnotationProperty .
-
 
 ###  http://purl.org/dc/terms/created
 dcterms:created rdf:type owl:AnnotationProperty .