diff --git a/.gitignore b/.gitignore
index 981541515..2d2370139 100644
--- a/.gitignore
+++ b/.gitignore
@@ -5,6 +5,7 @@
 .nvm-version
 node_modules
 npm-debug.log
+debug.log
 /tags
 /atom-shell/
 docs/output
diff --git a/package.json b/package.json
index 43b3748df..028b56d38 100644
--- a/package.json
+++ b/package.json
@@ -20,7 +20,7 @@
     "first-mate": "0.5.0",
     "fs-plus": "0.7.0",
     "fuzzaldrin": "0.1.0",
-    "git-utils": "0.28.0",
+    "git-utils": "0.29.0",
     "guid": "0.0.10",
     "jasmine-focused": "~0.15.0",
     "mkdirp": "0.3.5",
@@ -80,7 +80,7 @@
     "dev-live-reload": "0.13.0",
     "editor-stats": "0.5.0",
     "exception-reporting": "0.5.0",
-    "find-and-replace": "0.35.0",
+    "find-and-replace": "0.36.0",
     "fuzzy-finder": "0.19.0",
     "gists": "0.6.0",
     "git-diff": "0.13.0",
@@ -103,7 +103,7 @@
     "terminal": "0.15.0",
     "timecop": "0.9.0",
     "to-the-hubs": "0.8.0",
-    "tree-view": "0.25.0",
+    "tree-view": "0.26.0",
     "visual-bell": "0.3.0",
     "whitespace": "0.8.0",
     "wrap-guide": "0.4.0",
diff --git a/src/directory.coffee b/src/directory.coffee
index 9e433a2de..1e1b76ba1 100644
--- a/src/directory.coffee
+++ b/src/directory.coffee
@@ -65,6 +65,9 @@ class Directory
   relativize: (fullPath) ->
     return fullPath unless fullPath
 
+    # Normalize forward slashes to back slashes on windows
+    fullPath = fullPath.replace(/\//g, '\\') if process.platform is 'win32'
+
     if fullPath is @getPath()
       ''
     else if fullPath.indexOf(path.join(@getPath(), path.sep)) is 0
diff --git a/src/git.coffee b/src/git.coffee
index c58b06079..c1fb57853 100644
--- a/src/git.coffee
+++ b/src/git.coffee
@@ -235,7 +235,11 @@ class Git
   #
   # Returns an object with two keys, `ahead` and `behind`. These will always be
   # greater than zero.
-  getLineDiffs: (path, text) -> @getRepo().getLineDiffs(@relativize(path), text)
+  getLineDiffs: (path, text) ->
+    # Ignore eol of line differences on windows so that files checked in as
+    # LF don't report every line modified when the text contains CRLF endings.
+    options = ignoreEolWhitespace: process.platform is 'win32'
+    @getRepo().getLineDiffs(@relativize(path), text, options)
 
   # Public: Returns the git configuration value specified by the key.
   getConfigValue: (key) -> @getRepo().getConfigValue(key)