diff --git a/revdep/README.md b/revdep/README.md index ae39e72f4..afb2b5cdd 100644 --- a/revdep/README.md +++ b/revdep/README.md @@ -1,25 +1,42 @@ # Revdeps -## Failed to check (18) +## Failed to check (27) |package |version |error |warning |note | |:------------------|:-------|:-----|:-------|:----| +|animalEKF |1.2 |1 | | | +|antaresViz |? | | | | +|AovBay |0.1.0 |1 | | | |bigPint |? | | | | |bioCancer |? | | | | -|ctsem |3.9.1 |1 | | | -|diveR |? | | | | +|chipPCR |1.0-2 |1 | | | +|ctsem |3.10.0 |1 | | | +|DynNom |5.1 |1 | | | |EBImage |? | | | | |g3viz |? | | | | |GeneNetworkBuilder |? | | | | -|grandR |? | | | | |InterCellar |? | | | | |LACE |? | | | | |loon.shiny |? | | | | |MatrixQCvis |? | | | | +|metricsgraphics |? | | | | |modchart |? | | | | -|multilevelcoda |1.2.3 |1 | | | |omicsViewer |? | | | | -|RQuantLib |0.4.21 |1 | | | +|robmedExtra |0.1.0 |1 | | | +|RQuantLib |0.4.23 |1 | | | |rstanarm |2.32.1 |1 | | | -|Seurat |? | | | | +|SensMap |0.7 |1 | | | +|Seurat |5.1.0 |1 | | | +|shinyTempSignal |0.0.8 |1 | | | +|Signac |1.13.0 |1 | | | +|statsr |0.3.0 |1 | | | +|tidyvpc |1.5.1 |1 | | | + +## New problems (3) + +|package |version |error |warning |note | +|:------------|:-------|:-----|:-------|:------| +|[idiogramFISH](problems.md#idiogramfish)|2.0.13 |1 | |__+1__ | +|[iheatmapr](problems.md#iheatmapr)|0.7.1 | | |__+1__ | +|[polmineR](problems.md#polminer)|0.8.9 | | |__+1__ | diff --git a/revdep/cran.md b/revdep/cran.md index c261df00c..5f9b0c3ea 100644 --- a/revdep/cran.md +++ b/revdep/cran.md @@ -1,19 +1,38 @@ ## revdepcheck results -We checked 1201 reverse dependencies (1191 from CRAN + 10 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package. +We checked 1213 reverse dependencies (1201 from CRAN + 12 from Bioconductor), comparing R CMD check results across CRAN and dev versions of this package. - * We saw 0 new problems - * We failed to check 8 packages + * We saw 3 new problems + * We failed to check 15 packages Issues with CRAN packages are summarised below. +### New problems +(This reports the first line of each new failure) + +* idiogramFISH + checking installed package size ... NOTE + +* iheatmapr + checking installed package size ... NOTE + +* polmineR + checking installed package size ... NOTE + ### Failed to check -* ctsem (NA) -* diveR (NA) -* grandR (NA) -* loon.shiny (NA) -* multilevelcoda (NA) -* RQuantLib (NA) -* rstanarm (NA) -* Seurat (NA) +* animalEKF (NA) +* AovBay (NA) +* chipPCR (NA) +* ctsem (NA) +* DynNom (NA) +* loon.shiny (NA) +* robmedExtra (NA) +* RQuantLib (NA) +* rstanarm (NA) +* SensMap (NA) +* Seurat (NA) +* shinyTempSignal (NA) +* Signac (NA) +* statsr (NA) +* tidyvpc (NA) diff --git a/revdep/problems.md b/revdep/problems.md index 9a2073633..6b3389338 100644 --- a/revdep/problems.md +++ b/revdep/problems.md @@ -1 +1,94 @@ -*Wow, no problems at all. :)* \ No newline at end of file +# idiogramFISH + +
+ +* Version: 2.0.13 +* GitHub: NA +* Source code: https://github.com/cran/idiogramFISH +* Date/Publication: 2023-08-22 16:50:02 UTC +* Number of recursive dependencies: 164 + +Run `revdepcheck::cloud_details(, "idiogramFISH")` for more info + +
+ +## Newly broken + +* checking installed package size ... NOTE + ``` + installed size is 5.1Mb + sub-directories of 1Mb or more: + R 1.5Mb + doc 2.0Mb + ``` + +## In both + +* checking running R code from vignettes ... ERROR + ``` + Errors in running code in vignettes: + when running code in ‘index.Rmd’ + ... + > if (requireNamespace("RCurl", quietly = TRUE)) { + + v <- sub("Version: ", "", readLines("../DESCRIPTION")[3]) + + pkg <- "idiogramFISH" + + l .... [TRUNCATED] + Warning in file(con, "r") : + cannot open file '../DESCRIPTION': No such file or directory + + When sourcing ‘index.R’: + Error: cannot open the connection + Execution halted + + ‘AVignette.Rmd’ using ‘UTF-8’... OK + ‘index.Rmd’ using ‘UTF-8’... failed + ``` + +# iheatmapr + +
+ +* Version: 0.7.1 +* GitHub: https://github.com/ropensci/iheatmapr +* Source code: https://github.com/cran/iheatmapr +* Date/Publication: 2024-01-25 23:50:02 UTC +* Number of recursive dependencies: 92 + +Run `revdepcheck::cloud_details(, "iheatmapr")` for more info + +
+ +## Newly broken + +* checking installed package size ... NOTE + ``` + installed size is 5.3Mb + sub-directories of 1Mb or more: + R 1.5Mb + htmlwidgets 3.5Mb + ``` + +# polmineR + +
+ +* Version: 0.8.9 +* GitHub: https://github.com/PolMine/polmineR +* Source code: https://github.com/cran/polmineR +* Date/Publication: 2023-10-29 21:50:02 UTC +* Number of recursive dependencies: 96 + +Run `revdepcheck::cloud_details(, "polmineR")` for more info + +
+ +## Newly broken + +* checking installed package size ... NOTE + ``` + installed size is 5.3Mb + sub-directories of 1Mb or more: + R 2.0Mb + extdata 1.9Mb + ``` +