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weekly dash not running locally due to conda

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This commit is contained in:
Jeffrey Garretson
2025-10-14 11:26:31 -06:00
parent cb34002447
commit 89184e5119
1 changed files with 17 additions and 10 deletions
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27
testingScripts/weeklyDash-template.pbs
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@@ -20,19 +20,26 @@ echo 'The currently loaded modules are:'
module list
echo 'Loading python environment.'
mage_miniconda3="${HOME}/miniconda3"
mage_conda="${mage_miniconda3}/bin/conda"
__conda_setup="$($mage_conda 'shell.bash' 'hook' 2> /dev/null)"
if [ $? -eq 0 ]; then
eval "$__conda_setup"
else
if [ -f "$mage_miniconda3/etc/profile.d/conda.sh" ]; then
. "$mage_miniconda3/etc/profile.d/conda.sh"
mage_test_root=$HOME
if [ -d "${mage_test_root}/miniconda3" ]; then
echo 'Loading local miniconda3'
mage_miniconda3="${mage_test_root}/miniconda3"
mage_conda="${mage_miniconda3}/bin/conda"
__conda_setup="$($mage_conda 'shell.bash' 'hook' 2> /dev/null)"
if [ $? -eq 0 ]; then
eval "$__conda_setup"
else
export PATH="$mage_miniconda3/bin:$PATH"
if [ -f "$mage_miniconda3/etc/profile.d/conda.sh" ]; then
. "$mage_miniconda3/etc/profile.d/conda.sh"
else
export PATH="$mage_miniconda3/bin:$PATH"
fi
fi
unset __conda_setup
else
echo 'Loading conda module'
module load conda
fi
unset __conda_setup
conda activate {{ conda_environment }}
echo "The current conda environment is ${CONDA_PREFIX}."