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4 Commits
coverity_s
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12
.gitignore
vendored
12
.gitignore
vendored
@@ -1,6 +1,6 @@
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||||
target/
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||||
.settings/
|
||||
.classpath
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||||
.project
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||||
/target/
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||||
*.swp
|
||||
target/
|
||||
.settings/
|
||||
.classpath
|
||||
.project
|
||||
/target/
|
||||
*.swp
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||||
|
||||
16
.travis.yml
16
.travis.yml
@@ -1,18 +1,4 @@
|
||||
language: java
|
||||
jdk:
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||||
- openjdk7
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||||
env:
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||||
global:
|
||||
# The next declaration is the encrypted COVERITY_SCAN_TOKEN, created
|
||||
# via the "travis encrypt" command using the project repo's public key
|
||||
- secure: "kd49BqB0JXweutiUMSwO2iH6R2A0AW/EsY7bkQUhOnEF8zKQUpazSDcPhuVO9Ax2BLgrZMR0NFpsTDqaAUea/LJS47Iq2w5Hf75kDAH6LM0STgxPRuNzGjT4CxNlCUF6aq/74yrFQuMfLXSRrWdIJa/0JEEJdGPqMY61+4eXBuE="
|
||||
|
||||
addons:
|
||||
coverity_scan:
|
||||
project:
|
||||
name: "JHUAPL/AccumuloGraph"
|
||||
description: "Build submitted via Travis CI"
|
||||
notification_email: webbrl1@live.com
|
||||
build_command_prepend: "mvn clean"
|
||||
build_command: "mvn -DskipTests=true compile"
|
||||
branch_pattern: coverity_scan
|
||||
|
||||
|
||||
402
LICENSE
402
LICENSE
@@ -1,201 +1,201 @@
|
||||
Apache License
|
||||
Version 2.0, January 2004
|
||||
http://www.apache.org/licenses/
|
||||
|
||||
TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
|
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|
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"License" shall mean the terms and conditions for use, reproduction,
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|
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|
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|
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|
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|
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"You" (or "Your") shall mean an individual or Legal Entity
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|
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|
||||
Apache License
|
||||
Version 2.0, January 2004
|
||||
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|
||||
|
||||
TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
|
||||
|
||||
1. Definitions.
|
||||
|
||||
"License" shall mean the terms and conditions for use, reproduction,
|
||||
and distribution as defined by Sections 1 through 9 of this document.
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"Licensor" shall mean the copyright owner or entity authorized by
|
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"Legal Entity" shall mean the union of the acting entity and all
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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||||
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|
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|
||||
source, and configuration files.
|
||||
|
||||
"Object" form shall mean any form resulting from mechanical
|
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|
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|
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and conversions to other media types.
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|
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|
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||||
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Notwithstanding the above, nothing herein shall supersede or modify
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||||
the terms of any separate license agreement you may have executed
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with Licensor regarding such Contributions.
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|
||||
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|
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names, trademarks, service marks, or product names of the Licensor,
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except as required for reasonable and customary use in describing the
|
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origin of the Work and reproducing the content of the NOTICE file.
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||||
7. Disclaimer of Warranty. Unless required by applicable law or
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agreed to in writing, Licensor provides the Work (and each
|
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Contributor provides its Contributions) on an "AS IS" BASIS,
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WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or
|
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implied, including, without limitation, any warranties or conditions
|
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of TITLE, NON-INFRINGEMENT, MERCHANTABILITY, or FITNESS FOR A
|
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PARTICULAR PURPOSE. You are solely responsible for determining the
|
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appropriateness of using or redistributing the Work and assume any
|
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risks associated with Your exercise of permissions under this License.
|
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|
||||
8. Limitation of Liability. In no event and under no legal theory,
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whether in tort (including negligence), contract, or otherwise,
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unless required by applicable law (such as deliberate and grossly
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negligent acts) or agreed to in writing, shall any Contributor be
|
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liable to You for damages, including any direct, indirect, special,
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incidental, or consequential damages of any character arising as a
|
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result of this License or out of the use or inability to use the
|
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Work (including but not limited to damages for loss of goodwill,
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work stoppage, computer failure or malfunction, or any and all
|
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other commercial damages or losses), even if such Contributor
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has been advised of the possibility of such damages.
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9. Accepting Warranty or Additional Liability. While redistributing
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the Work or Derivative Works thereof, You may choose to offer,
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and charge a fee for, acceptance of support, warranty, indemnity,
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or other liability obligations and/or rights consistent with this
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License. However, in accepting such obligations, You may act only
|
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on Your own behalf and on Your sole responsibility, not on behalf
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||||
of any other Contributor, and only if You agree to indemnify,
|
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defend, and hold each Contributor harmless for any liability
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incurred by, or claims asserted against, such Contributor by reason
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||||
of your accepting any such warranty or additional liability.
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|
||||
END OF TERMS AND CONDITIONS
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|
||||
APPENDIX: How to apply the Apache License to your work.
|
||||
|
||||
To apply the Apache License to your work, attach the following
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|
||||
the brackets!) The text should be enclosed in the appropriate
|
||||
comment syntax for the file format. We also recommend that a
|
||||
file or class name and description of purpose be included on the
|
||||
same "printed page" as the copyright notice for easier
|
||||
identification within third-party archives.
|
||||
|
||||
Copyright 2014 The Johns Hopkins University Applied Physics Laboratory
|
||||
|
||||
Licensed under the Apache License, Version 2.0 (the "License");
|
||||
you may not use this file except in compliance with the License.
|
||||
You may obtain a copy of the License at
|
||||
|
||||
http://www.apache.org/licenses/LICENSE-2.0
|
||||
|
||||
Unless required by applicable law or agreed to in writing, software
|
||||
distributed under the License is distributed on an "AS IS" BASIS,
|
||||
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
See the License for the specific language governing permissions and
|
||||
limitations under the License.
|
||||
|
||||
@@ -28,7 +28,7 @@ to Maven Central.
|
||||
<dependency>
|
||||
<groupId>edu.jhuapl.tinkerpop</groupId>
|
||||
<artifactId>blueprints-accumulo-graph</artifactId>
|
||||
<version>0.2.1</version>
|
||||
<version>0.2.0</version>
|
||||
</dependency>
|
||||
```
|
||||
|
||||
|
||||
@@ -49,10 +49,8 @@ public class AccumuloEdge extends AccumuloElement implements Edge {
|
||||
|
||||
@Override
|
||||
public Vertex getVertex(Direction direction) throws IllegalArgumentException {
|
||||
|
||||
if (!Direction.IN.equals(direction) && !Direction.OUT.equals(direction)) {
|
||||
throw new IllegalArgumentException("Invalid direction: "+direction);
|
||||
|
||||
}
|
||||
|
||||
// The vertex information needs to be loaded.
|
||||
|
||||
@@ -177,7 +177,6 @@ public class AccumuloGraph implements Graph, KeyIndexableGraph, IndexableGraph {
|
||||
|
||||
@Override
|
||||
public void removeVertex(Vertex vertex) {
|
||||
|
||||
vertex.remove();
|
||||
}
|
||||
|
||||
|
||||
@@ -19,6 +19,8 @@ import java.io.IOException;
|
||||
import java.io.Serializable;
|
||||
import java.lang.reflect.Field;
|
||||
import java.nio.file.Files;
|
||||
import java.nio.file.Path;
|
||||
import java.nio.file.attribute.FileAttribute;
|
||||
import java.util.Arrays;
|
||||
import java.util.Iterator;
|
||||
import java.util.List;
|
||||
@@ -75,7 +77,7 @@ implements Serializable {
|
||||
/**
|
||||
* Temp directory used by getInstance when a Mini InstanceType is used.
|
||||
*/
|
||||
private String miniClusterTempDir;
|
||||
private File miniClusterTempDir;
|
||||
private MiniAccumuloCluster accumuloMiniCluster;
|
||||
|
||||
|
||||
@@ -254,6 +256,7 @@ implements Serializable {
|
||||
InstanceType.Mini.equals(type)) {
|
||||
setUser("root");
|
||||
setPassword("");
|
||||
setInstanceName("");
|
||||
setCreate(true);
|
||||
}
|
||||
|
||||
@@ -895,6 +898,20 @@ implements Serializable {
|
||||
if (connector == null) {
|
||||
Instance inst = null;
|
||||
switch (getInstanceType()) {
|
||||
case Mini:
|
||||
if (miniClusterTempDir == null) {
|
||||
miniClusterTempDir = Files.createTempDirectory("accumulo-mini").toFile();
|
||||
}
|
||||
accumuloMiniCluster = new MiniAccumuloCluster(miniClusterTempDir, ""); // conf.getString(PASSWORD)
|
||||
try {
|
||||
accumuloMiniCluster.start();
|
||||
} catch (Exception ex) {
|
||||
throw new AccumuloGraphException(ex);
|
||||
}
|
||||
this.setInstanceName(accumuloMiniCluster.getInstanceName());
|
||||
this.setZooKeeperHosts(accumuloMiniCluster.getZooKeepers());
|
||||
this.setPassword("");
|
||||
|
||||
case Distributed:
|
||||
if (getInstanceName() == null) {
|
||||
throw new IllegalArgumentException("Must specify instance name for distributed mode");
|
||||
@@ -904,24 +921,7 @@ implements Serializable {
|
||||
inst = new ZooKeeperInstance(getInstanceName(), getZooKeeperHosts());
|
||||
break;
|
||||
|
||||
case Mini:
|
||||
File dir = null;
|
||||
if (miniClusterTempDir == null) {
|
||||
dir = createTempDir();
|
||||
dir.deleteOnExit();
|
||||
} else {
|
||||
// already set by setMiniClusterTempDir(), It should be cleaned up outside of this class.
|
||||
dir = new File(miniClusterTempDir);
|
||||
}
|
||||
accumuloMiniCluster = new MiniAccumuloCluster(dir, ""); // conf.getString(PASSWORD)
|
||||
try {
|
||||
accumuloMiniCluster.start();
|
||||
} catch (Exception ex) {
|
||||
throw new AccumuloGraphException(ex);
|
||||
}
|
||||
inst = new ZooKeeperInstance(accumuloMiniCluster.getInstanceName(), accumuloMiniCluster.getZooKeepers());
|
||||
throw new UnsupportedOperationException("TODO");
|
||||
|
||||
|
||||
case Mock:
|
||||
inst = new MockInstance(getInstanceName());
|
||||
break;
|
||||
@@ -971,7 +971,7 @@ implements Serializable {
|
||||
* @param miniClusterTempDir
|
||||
*/
|
||||
public AccumuloGraphConfiguration setMiniClusterTempDir(String miniClusterTempDir) {
|
||||
this.miniClusterTempDir = miniClusterTempDir;
|
||||
this.miniClusterTempDir = new File(miniClusterTempDir);
|
||||
return this;
|
||||
}
|
||||
|
||||
@@ -1046,8 +1046,8 @@ implements Serializable {
|
||||
checkPropertyValue(Keys.PASSWORD, getPassword(), false);
|
||||
// no break intentional
|
||||
case Mini:
|
||||
checkPropertyValue(Keys.INSTANCE, getInstanceName(), false);
|
||||
checkPropertyValue(Keys.PASSWORD, getPassword(), true);
|
||||
// checkPropertyValue(Keys.INSTANCE, getInstanceName(), false);
|
||||
// checkPropertyValue(Keys.PASSWORD, getPassword(), true);
|
||||
// no break intentional
|
||||
case Mock:
|
||||
checkPropertyValue(Keys.GRAPH_NAME, getGraphName(), false);
|
||||
@@ -1089,13 +1089,6 @@ implements Serializable {
|
||||
}
|
||||
}
|
||||
|
||||
private File createTempDir() throws IOException {
|
||||
File temp = File.createTempFile(AccumuloGraphConfiguration
|
||||
.class.getSimpleName(), ".mini.tmp");
|
||||
Files.delete(temp.toPath());
|
||||
Files.createDirectory(temp.toPath());
|
||||
return temp;
|
||||
}
|
||||
|
||||
/**
|
||||
* Print out this configuration.
|
||||
|
||||
@@ -1,36 +1,36 @@
|
||||
/* Copyright 2014 The Johns Hopkins University Applied Physics Laboratory
|
||||
*
|
||||
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||
* you may not use this file except in compliance with the License.
|
||||
* You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package edu.jhuapl.tinkerpop;
|
||||
|
||||
public class AccumuloGraphException extends RuntimeException {
|
||||
|
||||
private static final long serialVersionUID = 2179662107592532517L;
|
||||
|
||||
public AccumuloGraphException() {
|
||||
|
||||
}
|
||||
|
||||
public AccumuloGraphException(String reason) {
|
||||
super(reason);
|
||||
}
|
||||
|
||||
public AccumuloGraphException(Throwable cause) {
|
||||
super(cause);
|
||||
}
|
||||
|
||||
public AccumuloGraphException(String reason, Throwable cause) {
|
||||
super(reason, cause);
|
||||
}
|
||||
}
|
||||
/* Copyright 2014 The Johns Hopkins University Applied Physics Laboratory
|
||||
*
|
||||
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||
* you may not use this file except in compliance with the License.
|
||||
* You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package edu.jhuapl.tinkerpop;
|
||||
|
||||
public class AccumuloGraphException extends RuntimeException {
|
||||
|
||||
private static final long serialVersionUID = 2179662107592532517L;
|
||||
|
||||
public AccumuloGraphException() {
|
||||
|
||||
}
|
||||
|
||||
public AccumuloGraphException(String reason) {
|
||||
super(reason);
|
||||
}
|
||||
|
||||
public AccumuloGraphException(Throwable cause) {
|
||||
super(cause);
|
||||
}
|
||||
|
||||
public AccumuloGraphException(String reason, Throwable cause) {
|
||||
super(reason, cause);
|
||||
}
|
||||
}
|
||||
|
||||
@@ -1,50 +1,50 @@
|
||||
/* Copyright 2014 The Johns Hopkins University Applied Physics Laboratory
|
||||
*
|
||||
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||
* you may not use this file except in compliance with the License.
|
||||
* You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package edu.jhuapl.tinkerpop;
|
||||
|
||||
import org.apache.commons.configuration.Configuration;
|
||||
import org.apache.commons.configuration.HierarchicalConfiguration;
|
||||
|
||||
import com.tinkerpop.blueprints.Graph;
|
||||
import com.tinkerpop.blueprints.GraphFactory;
|
||||
import com.tinkerpop.rexster.Tokens;
|
||||
import com.tinkerpop.rexster.config.GraphConfiguration;
|
||||
import com.tinkerpop.rexster.config.GraphConfigurationContext;
|
||||
import com.tinkerpop.rexster.config.GraphConfigurationException;
|
||||
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraphConfiguration.InstanceType;
|
||||
|
||||
public class AccumuloRexsterGraphConfiguration implements GraphConfiguration {
|
||||
|
||||
@Override
|
||||
public Graph configureGraphInstance(GraphConfigurationContext context) throws GraphConfigurationException {
|
||||
|
||||
Configuration conf = context.getProperties();
|
||||
try {
|
||||
conf = ((HierarchicalConfiguration) conf).configurationAt(Tokens.REXSTER_GRAPH_PROPERTIES);
|
||||
} catch (IllegalArgumentException iae) {
|
||||
throw new GraphConfigurationException("Check graph configuration. Missing or empty configuration element: " + Tokens.REXSTER_GRAPH_PROPERTIES);
|
||||
}
|
||||
|
||||
AccumuloGraphConfiguration cfg = new AccumuloGraphConfiguration(conf);
|
||||
if (cfg.getInstanceType().equals(InstanceType.Mock)) {
|
||||
cfg.setPassword("".getBytes());
|
||||
cfg.setUser("root");
|
||||
}
|
||||
cfg.setGraphName(context.getProperties().getString(Tokens.REXSTER_GRAPH_NAME));
|
||||
return GraphFactory.open(cfg.getConfiguration());
|
||||
}
|
||||
|
||||
}
|
||||
/* Copyright 2014 The Johns Hopkins University Applied Physics Laboratory
|
||||
*
|
||||
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||
* you may not use this file except in compliance with the License.
|
||||
* You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package edu.jhuapl.tinkerpop;
|
||||
|
||||
import org.apache.commons.configuration.Configuration;
|
||||
import org.apache.commons.configuration.HierarchicalConfiguration;
|
||||
|
||||
import com.tinkerpop.blueprints.Graph;
|
||||
import com.tinkerpop.blueprints.GraphFactory;
|
||||
import com.tinkerpop.rexster.Tokens;
|
||||
import com.tinkerpop.rexster.config.GraphConfiguration;
|
||||
import com.tinkerpop.rexster.config.GraphConfigurationContext;
|
||||
import com.tinkerpop.rexster.config.GraphConfigurationException;
|
||||
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraphConfiguration.InstanceType;
|
||||
|
||||
public class AccumuloRexsterGraphConfiguration implements GraphConfiguration {
|
||||
|
||||
@Override
|
||||
public Graph configureGraphInstance(GraphConfigurationContext context) throws GraphConfigurationException {
|
||||
|
||||
Configuration conf = context.getProperties();
|
||||
try {
|
||||
conf = ((HierarchicalConfiguration) conf).configurationAt(Tokens.REXSTER_GRAPH_PROPERTIES);
|
||||
} catch (IllegalArgumentException iae) {
|
||||
throw new GraphConfigurationException("Check graph configuration. Missing or empty configuration element: " + Tokens.REXSTER_GRAPH_PROPERTIES);
|
||||
}
|
||||
|
||||
AccumuloGraphConfiguration cfg = new AccumuloGraphConfiguration(conf);
|
||||
if (cfg.getInstanceType().equals(InstanceType.Mock)) {
|
||||
cfg.setPassword("".getBytes());
|
||||
cfg.setUser("root");
|
||||
}
|
||||
cfg.setGraphName(context.getProperties().getString(Tokens.REXSTER_GRAPH_NAME));
|
||||
return GraphFactory.open(cfg.getConfiguration());
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
@@ -1,76 +1,76 @@
|
||||
/* Copyright 2014 The Johns Hopkins University Applied Physics Laboratory
|
||||
*
|
||||
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||
* you may not use this file except in compliance with the License.
|
||||
* You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package edu.jhuapl.tinkerpop.mapreduce;
|
||||
|
||||
import com.tinkerpop.blueprints.Direction;
|
||||
import com.tinkerpop.blueprints.Edge;
|
||||
import com.tinkerpop.blueprints.Vertex;
|
||||
import com.tinkerpop.blueprints.util.ExceptionFactory;
|
||||
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraph;
|
||||
|
||||
public class MapReduceEdge extends MapReduceElement implements Edge {
|
||||
|
||||
String sourceId;
|
||||
String label;
|
||||
String destinationId;
|
||||
|
||||
MapReduceEdge(AccumuloGraph parent) {
|
||||
super(parent);
|
||||
}
|
||||
|
||||
void setSourceId(String id) {
|
||||
sourceId = id;
|
||||
}
|
||||
|
||||
void setDestId(String id) {
|
||||
destinationId = id;
|
||||
}
|
||||
|
||||
MapReduceEdge(AccumuloGraph parent, String id, String src, String label, String dest) {
|
||||
super(parent);
|
||||
prepareId(id);
|
||||
this.sourceId = src;
|
||||
this.label = label;
|
||||
this.destinationId = dest;
|
||||
}
|
||||
|
||||
@Override
|
||||
public String getLabel() {
|
||||
return label;
|
||||
}
|
||||
|
||||
@Override
|
||||
public Vertex getVertex(Direction direction) throws IllegalArgumentException {
|
||||
return parent.getVertex(getVertexId(direction));
|
||||
}
|
||||
|
||||
public String getVertexId(Direction direction) throws IllegalArgumentException {
|
||||
switch (direction) {
|
||||
case IN:
|
||||
return destinationId;
|
||||
case OUT:
|
||||
return sourceId;
|
||||
case BOTH:
|
||||
default:
|
||||
throw ExceptionFactory.bothIsNotSupported();
|
||||
}
|
||||
}
|
||||
|
||||
public void setLabel(String label) {
|
||||
this.label = label;
|
||||
}
|
||||
|
||||
}
|
||||
/* Copyright 2014 The Johns Hopkins University Applied Physics Laboratory
|
||||
*
|
||||
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||
* you may not use this file except in compliance with the License.
|
||||
* You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package edu.jhuapl.tinkerpop.mapreduce;
|
||||
|
||||
import com.tinkerpop.blueprints.Direction;
|
||||
import com.tinkerpop.blueprints.Edge;
|
||||
import com.tinkerpop.blueprints.Vertex;
|
||||
import com.tinkerpop.blueprints.util.ExceptionFactory;
|
||||
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraph;
|
||||
|
||||
public class MapReduceEdge extends MapReduceElement implements Edge {
|
||||
|
||||
String sourceId;
|
||||
String label;
|
||||
String destinationId;
|
||||
|
||||
MapReduceEdge(AccumuloGraph parent) {
|
||||
super(parent);
|
||||
}
|
||||
|
||||
void setSourceId(String id) {
|
||||
sourceId = id;
|
||||
}
|
||||
|
||||
void setDestId(String id) {
|
||||
destinationId = id;
|
||||
}
|
||||
|
||||
MapReduceEdge(AccumuloGraph parent, String id, String src, String label, String dest) {
|
||||
super(parent);
|
||||
prepareId(id);
|
||||
this.sourceId = src;
|
||||
this.label = label;
|
||||
this.destinationId = dest;
|
||||
}
|
||||
|
||||
@Override
|
||||
public String getLabel() {
|
||||
return label;
|
||||
}
|
||||
|
||||
@Override
|
||||
public Vertex getVertex(Direction direction) throws IllegalArgumentException {
|
||||
return parent.getVertex(getVertexId(direction));
|
||||
}
|
||||
|
||||
public String getVertexId(Direction direction) throws IllegalArgumentException {
|
||||
switch (direction) {
|
||||
case IN:
|
||||
return destinationId;
|
||||
case OUT:
|
||||
return sourceId;
|
||||
case BOTH:
|
||||
default:
|
||||
throw ExceptionFactory.bothIsNotSupported();
|
||||
}
|
||||
}
|
||||
|
||||
public void setLabel(String label) {
|
||||
this.label = label;
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
@@ -117,7 +117,7 @@ public class MapReduceVertex extends MapReduceElement implements Vertex {
|
||||
return e.getVertex(direction);
|
||||
case BOTH:
|
||||
Vertex v = e.getVertex(Direction.IN);
|
||||
if (v.getId().equals(id)) {
|
||||
if (this.equals(v)) {
|
||||
return e.getVertex(Direction.OUT);
|
||||
} else {
|
||||
return v;
|
||||
|
||||
File diff suppressed because it is too large
Load Diff
@@ -1,32 +1,32 @@
|
||||
/* Copyright 2014 The Johns Hopkins University Applied Physics Laboratory
|
||||
*
|
||||
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||
* you may not use this file except in compliance with the License.
|
||||
* You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package edu.jhuapl.tinkerpop;
|
||||
|
||||
import com.tinkerpop.blueprints.Graph;
|
||||
import com.tinkerpop.blueprints.GraphFactory;
|
||||
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraphConfiguration.InstanceType;
|
||||
|
||||
public class AccumuloGraphTestUtils {
|
||||
|
||||
public static AccumuloGraphConfiguration generateGraphConfig(String graphDirectoryName) {
|
||||
return new AccumuloGraphConfiguration().setInstanceType(InstanceType.Mock)
|
||||
.setGraphName(graphDirectoryName).setCreate(true);
|
||||
}
|
||||
|
||||
public static Graph makeGraph(String name) {
|
||||
return GraphFactory.open(generateGraphConfig(name));
|
||||
}
|
||||
}
|
||||
/* Copyright 2014 The Johns Hopkins University Applied Physics Laboratory
|
||||
*
|
||||
* Licensed under the Apache License, Version 2.0 (the "License");
|
||||
* you may not use this file except in compliance with the License.
|
||||
* You may obtain a copy of the License at
|
||||
*
|
||||
* http://www.apache.org/licenses/LICENSE-2.0
|
||||
*
|
||||
* Unless required by applicable law or agreed to in writing, software
|
||||
* distributed under the License is distributed on an "AS IS" BASIS,
|
||||
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
|
||||
* See the License for the specific language governing permissions and
|
||||
* limitations under the License.
|
||||
*/
|
||||
package edu.jhuapl.tinkerpop;
|
||||
|
||||
import com.tinkerpop.blueprints.Graph;
|
||||
import com.tinkerpop.blueprints.GraphFactory;
|
||||
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraphConfiguration.InstanceType;
|
||||
|
||||
public class AccumuloGraphTestUtils {
|
||||
|
||||
public static AccumuloGraphConfiguration generateGraphConfig(String graphDirectoryName) {
|
||||
return new AccumuloGraphConfiguration().setInstanceType(InstanceType.Mini)
|
||||
.setGraphName(graphDirectoryName).setCreate(true);
|
||||
}
|
||||
|
||||
public static Graph makeGraph(String name) {
|
||||
return GraphFactory.open(generateGraphConfig(name));
|
||||
}
|
||||
}
|
||||
|
||||
@@ -1,111 +1,111 @@
|
||||
package edu.jhuapl.tinkerpop.mapreduce;
|
||||
|
||||
import static org.junit.Assert.assertEquals;
|
||||
import static org.junit.Assert.assertNull;
|
||||
|
||||
import java.io.IOException;
|
||||
|
||||
import org.apache.accumulo.core.util.CachedConfiguration;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.conf.Configured;
|
||||
import org.apache.hadoop.io.NullWritable;
|
||||
import org.apache.hadoop.io.Text;
|
||||
import org.apache.hadoop.mapreduce.Job;
|
||||
import org.apache.hadoop.mapreduce.Mapper;
|
||||
import org.apache.hadoop.util.Tool;
|
||||
import org.apache.hadoop.util.ToolRunner;
|
||||
import org.junit.Test;
|
||||
|
||||
import com.tinkerpop.blueprints.Element;
|
||||
import com.tinkerpop.blueprints.Graph;
|
||||
import com.tinkerpop.blueprints.GraphFactory;
|
||||
import com.tinkerpop.blueprints.Vertex;
|
||||
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraphConfiguration;
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraphConfiguration.InstanceType;
|
||||
|
||||
public class ElementOutputFormatTest {
|
||||
private static AssertionError e1 = null;
|
||||
private static AssertionError e2 = null;
|
||||
|
||||
private static class MRTester extends Configured implements Tool {
|
||||
|
||||
private static class TestVertexMapper extends Mapper<Text,Vertex,NullWritable,Element> {
|
||||
int count = 0;
|
||||
|
||||
@Override
|
||||
protected void map(Text k, Vertex v, Context context) throws IOException, InterruptedException {
|
||||
try {
|
||||
assertEquals(k.toString(), v.getId().toString());
|
||||
|
||||
v.setProperty("NAME", "BANANA" + v.getId());
|
||||
context.write(NullWritable.get(), v);
|
||||
} catch (AssertionError e) {
|
||||
e1 = e;
|
||||
}
|
||||
count++;
|
||||
}
|
||||
|
||||
@Override
|
||||
protected void cleanup(Context context) throws IOException, InterruptedException {
|
||||
try {
|
||||
assertEquals(100, count);
|
||||
} catch (AssertionError e) {
|
||||
e2 = e;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@Override
|
||||
public int run(String[] args) throws Exception {
|
||||
|
||||
setConf(new Configuration());
|
||||
|
||||
getConf().set("fs.default.name", "local");
|
||||
|
||||
Job job = Job.getInstance(getConf(), this.getClass().getSimpleName() + "_" + System.currentTimeMillis());
|
||||
job.setJarByClass(this.getClass());
|
||||
AccumuloGraphConfiguration cfg = new AccumuloGraphConfiguration().setInstanceName("_mapreduce_instance2").setUser("root").setPassword("".getBytes())
|
||||
.setGraphName("_mapreduce_table_2").setInstanceType(InstanceType.Mock).setCreate(true);
|
||||
job.setInputFormatClass(VertexInputFormat.class);
|
||||
|
||||
VertexInputFormat.setAccumuloGraphConfiguration(job, cfg);
|
||||
|
||||
ElementOutputFormat.setAccumuloGraphConfiguration(job, cfg);
|
||||
|
||||
job.setMapperClass(TestVertexMapper.class);
|
||||
|
||||
job.setMapOutputKeyClass(NullWritable.class);
|
||||
job.setMapOutputValueClass(Element.class);
|
||||
job.setOutputFormatClass(ElementOutputFormat.class);
|
||||
|
||||
job.setNumReduceTasks(0);
|
||||
|
||||
job.waitForCompletion(true);
|
||||
|
||||
return job.isSuccessful() ? 0 : 1;
|
||||
}
|
||||
|
||||
public static int main(String[] args) throws Exception {
|
||||
return ToolRunner.run(CachedConfiguration.getInstance(), new MRTester(), args);
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testVertexOutputFormatMap() throws Exception {
|
||||
final String INSTANCE_NAME = "_mapreduce_instance2";
|
||||
final String TEST_TABLE_1 = "_mapreduce_table_2";
|
||||
|
||||
if (!System.getProperty("os.name").startsWith("Windows")) {
|
||||
Graph g = GraphFactory.open(new AccumuloGraphConfiguration().setInstanceName(INSTANCE_NAME).setUser("root").setPassword("".getBytes())
|
||||
.setGraphName(TEST_TABLE_1).setInstanceType(InstanceType.Mock).setCreate(true).getConfiguration());
|
||||
for (int i = 0; i < 100; i++) {
|
||||
g.addVertex(i + "");
|
||||
}
|
||||
assertEquals(0, MRTester.main(new String[] {}));
|
||||
assertNull(e1);
|
||||
assertNull(e2);
|
||||
assertEquals(g.getVertex("1").getProperty("NAME"), "BANANA1");
|
||||
}
|
||||
}
|
||||
}
|
||||
package edu.jhuapl.tinkerpop.mapreduce;
|
||||
|
||||
import static org.junit.Assert.assertEquals;
|
||||
import static org.junit.Assert.assertNull;
|
||||
|
||||
import java.io.IOException;
|
||||
|
||||
import org.apache.accumulo.core.util.CachedConfiguration;
|
||||
import org.apache.hadoop.conf.Configuration;
|
||||
import org.apache.hadoop.conf.Configured;
|
||||
import org.apache.hadoop.io.NullWritable;
|
||||
import org.apache.hadoop.io.Text;
|
||||
import org.apache.hadoop.mapreduce.Job;
|
||||
import org.apache.hadoop.mapreduce.Mapper;
|
||||
import org.apache.hadoop.util.Tool;
|
||||
import org.apache.hadoop.util.ToolRunner;
|
||||
import org.junit.Test;
|
||||
|
||||
import com.tinkerpop.blueprints.Element;
|
||||
import com.tinkerpop.blueprints.Graph;
|
||||
import com.tinkerpop.blueprints.GraphFactory;
|
||||
import com.tinkerpop.blueprints.Vertex;
|
||||
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraphConfiguration;
|
||||
import edu.jhuapl.tinkerpop.AccumuloGraphConfiguration.InstanceType;
|
||||
|
||||
public class ElementOutputFormatTest {
|
||||
private static AssertionError e1 = null;
|
||||
private static AssertionError e2 = null;
|
||||
|
||||
private static class MRTester extends Configured implements Tool {
|
||||
|
||||
private static class TestVertexMapper extends Mapper<Text,Vertex,NullWritable,Element> {
|
||||
int count = 0;
|
||||
|
||||
@Override
|
||||
protected void map(Text k, Vertex v, Context context) throws IOException, InterruptedException {
|
||||
try {
|
||||
assertEquals(k.toString(), v.getId().toString());
|
||||
|
||||
v.setProperty("NAME", "BANANA" + v.getId());
|
||||
context.write(NullWritable.get(), v);
|
||||
} catch (AssertionError e) {
|
||||
e1 = e;
|
||||
}
|
||||
count++;
|
||||
}
|
||||
|
||||
@Override
|
||||
protected void cleanup(Context context) throws IOException, InterruptedException {
|
||||
try {
|
||||
assertEquals(100, count);
|
||||
} catch (AssertionError e) {
|
||||
e2 = e;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@Override
|
||||
public int run(String[] args) throws Exception {
|
||||
|
||||
setConf(new Configuration());
|
||||
|
||||
getConf().set("fs.default.name", "local");
|
||||
|
||||
Job job = Job.getInstance(getConf(), this.getClass().getSimpleName() + "_" + System.currentTimeMillis());
|
||||
job.setJarByClass(this.getClass());
|
||||
AccumuloGraphConfiguration cfg = new AccumuloGraphConfiguration().setInstanceName("_mapreduce_instance2").setUser("root").setPassword("".getBytes())
|
||||
.setGraphName("_mapreduce_table_2").setInstanceType(InstanceType.Mock).setCreate(true);
|
||||
job.setInputFormatClass(VertexInputFormat.class);
|
||||
|
||||
VertexInputFormat.setAccumuloGraphConfiguration(job, cfg);
|
||||
|
||||
ElementOutputFormat.setAccumuloGraphConfiguration(job, cfg);
|
||||
|
||||
job.setMapperClass(TestVertexMapper.class);
|
||||
|
||||
job.setMapOutputKeyClass(NullWritable.class);
|
||||
job.setMapOutputValueClass(Element.class);
|
||||
job.setOutputFormatClass(ElementOutputFormat.class);
|
||||
|
||||
job.setNumReduceTasks(0);
|
||||
|
||||
job.waitForCompletion(true);
|
||||
|
||||
return job.isSuccessful() ? 0 : 1;
|
||||
}
|
||||
|
||||
public static int main(String[] args) throws Exception {
|
||||
return ToolRunner.run(CachedConfiguration.getInstance(), new MRTester(), args);
|
||||
}
|
||||
}
|
||||
|
||||
@Test
|
||||
public void testVertexOutputFormatMap() throws Exception {
|
||||
final String INSTANCE_NAME = "_mapreduce_instance2";
|
||||
final String TEST_TABLE_1 = "_mapreduce_table_2";
|
||||
|
||||
if (!System.getProperty("os.name").startsWith("Windows")) {
|
||||
Graph g = GraphFactory.open(new AccumuloGraphConfiguration().setInstanceName(INSTANCE_NAME).setUser("root").setPassword("".getBytes())
|
||||
.setGraphName(TEST_TABLE_1).setInstanceType(InstanceType.Mock).setCreate(true).getConfiguration());
|
||||
for (int i = 0; i < 100; i++) {
|
||||
g.addVertex(i + "");
|
||||
}
|
||||
assertEquals(0, MRTester.main(new String[] {}));
|
||||
assertNull(e1);
|
||||
assertNull(e2);
|
||||
assertEquals(g.getVertex("1").getProperty("NAME"), "BANANA1");
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
Reference in New Issue
Block a user