mirror of
https://github.com/CommonCoreOntology/CommonCoreOntologies.git
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172 lines
5.6 KiB
Makefile
172 lines
5.6 KiB
Makefile
# Common Core Ontology Pipeline
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# Adapted from previous works; see header comments for full attribution.
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# Contact - John Beverley <johnbeve@buffalo.edu>
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### Explanation ###
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# The workflow involves two major steps: first, individual ontology files are checked and tested.
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# After passing, they are merged into a single file, which is then checked and tested again.
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# ----------------------------------------
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# Project essentials
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config.ONTOLOGY_PREFIX := CCO
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config.BASE_IRI := https://www.commoncoreontologies.org/
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config.DEV_IRI := $(config.BASE_IRI)/dev
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config.MODULES_IRI := $(config.DEV_IRI)/modules
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# Local project directories
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config.SOURCE_DIR := src/
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config.TEMP_DIR := build/artifacts
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config.RELEASE_DIR := /
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config.REPORTS_DIR := $(config.TEMP_DIR)
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config.QUERIES_DIR := .github/deployment/sparql
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config.LIBRARY_DIR := build/lib
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# Settings
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config.FAIL_ON_TEST_FAILURES := false
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config.REPORT_FAIL_ON := none
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# Branch-specific configurations
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BRANCH := $(shell git rev-parse --abbrev-ref HEAD)
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# File names for dev branch
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DEV_FILES = \
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src/cco-modules/AgentOntology.ttl \
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src/cco-modules/ArtifactOntology.ttl \
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src/cco-modules/CurrencyUnitOntology.ttl \
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src/cco-modules/EventOntology.ttl \
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src/cco-modules/ExtendedRelationOntology.ttl \
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src/cco-modules/FacilityOntology.ttl \
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src/cco-modules/GeospatialOntology.ttl \
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src/cco-modules/QualityOntology.ttl \
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src/cco-modules/UnitsOfMeasureOntology.ttl \
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src/cco-modules/TimeOntology.ttl \
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src/cco-modules/InformationEntityOntology.ttl
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# File for combined ontology
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combined-file := $(config.SOURCE_DIR)/MergedAllCoreOntology.ttl
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# Other constants
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TODAY := $(shell date +%Y-%m-%d)
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TIMESTAMP := $(shell date +'%Y-%m-%d %H:%M')
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# Default name for release
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config.RELEASE_NAME := $(config.ONTOLOGY_PREFIX) $(TIMESTAMP)
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# Generic files
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EDITOR_BUILD_FILE = $(combined-file) # "editors ontology module"
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EDITOR_REPORT_FILE = $(config.REPORTS_DIR)/$(config.ONTOLOGY_PREFIX)-edit-report.tsv
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# Generic directories to create if needed
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REQUIRED_DIRS = $(config.LIBRARY_DIR) $(config.SOURCE_DIR) $(config.QUERIES_DIR) $(config.REPORTS_DIR)
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# ----------------------------------------
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#### Targets / main "goals" of this Makefile
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.PHONY: all
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all: setup reason-individual test-individual build-combined reason-combined test-combined
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# Setup target for creating necessary directories
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.PHONY: setup
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setup:
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mkdir -p $(REQUIRED_DIRS) src/ .github/deployment/sparql build/artifacts
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# Targets for dev branch - QC individual files and the combined file
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# Download ROBOT JAR
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ROBOT_FILE := $(config.LIBRARY_DIR)/robot.jar
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$(ROBOT_FILE): | $(config.LIBRARY_DIR)
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curl -L -o $@ https://github.com/ontodev/robot/releases/download/v1.8.4/robot.jar
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chmod +x $@
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# Reason individual files
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.PHONY: reason-individual
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reason-individual: $(ROBOT_FILE)
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for file in $(DEV_FILES); do \
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echo "Reasoning on $$file..."; \
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java -jar $(ROBOT_FILE) reason --input $$file --catalog src/cco-modules/catalog-v001.xml --reasoner HermiT; \
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done
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# Test individual files
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.PHONY: test-individual
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test-individual: $(ROBOT_FILE)
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for file in $(DEV_FILES); do \
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echo "Testing $$file..."; \
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java -jar $(ROBOT_FILE) verify --input $$file --output-dir $(config.REPORTS_DIR) --queries $(QUERIES) --fail-on-violation false || true; \
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done
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# Build combined file after individual files pass checks
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$(combined-file): $(DEV_FILES)
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cat $(DEV_FILES) > $@
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# Build and QC combined file
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.PHONY: build-combined
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build-combined: $(combined-file)
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.PHONY: reason-combined test-combined
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reason-combined: $(combined-file) | $(ROBOT_FILE)
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java -jar $(ROBOT_FILE) reason --input $(combined-file) --catalog src/cco-modules/catalog-v001.xml --reasoner HermiT
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test-combined: $(combined-file) | $(ROBOT_FILE)
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java -jar $(ROBOT_FILE) verify --input $(combined-file) --output-dir $(config.REPORTS_DIR) --queries $(QUERIES) --fail-on-violation false || true
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.PHONY: report-edit
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report-edit: TEST_INPUT = $(EDITOR_BUILD_FILE)
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report-edit: REPORT_FILE_INPUT = $(EDITOR_REPORT_FILE)
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report-edit: report
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.PHONY: output-release-filepath
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output-release-filepath:
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@echo $(combined-file)
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.PHONY: output-release-name
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output-release-name:
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@echo $(config.RELEASE_NAME)
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# ----------------------------------------
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#### Test / test ontology with reasoners and queries
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QUERIES = $(wildcard $(config.QUERIES_DIR)/*.sparql)
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# Check for inconsistency
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.PHONY: reason
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reason: $(TEST_INPUT) | $(ROBOT_FILE)
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java -jar $(ROBOT_FILE) reason --input $(TEST_INPUT) --reasoner HermiT
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# Test using specific queries
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.PHONY: verify
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verify: $(TEST_INPUT) $(QUERIES) | $(config.QUERIES_DIR) $(config.REPORTS_DIR) $(ROBOT_FILE)
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ifeq ($(QUERIES),)
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$(warning No query files found in $(config.QUERIES_DIR))
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else
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java -jar $(ROBOT_FILE) verify --input $(TEST_INPUT) --output-dir $(config.REPORTS_DIR) --queries $(QUERIES) --fail-on-violation false || true
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endif
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# Report using built-in ROBOT queries
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.PHONY: report
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report: $(TEST_INPUT) | $(config.REPORTS_DIR) $(ROBOT_FILE)
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java -jar $(ROBOT_FILE) report --input $(TEST_INPUT) \
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--labels true \
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--fail-on $(config.REPORT_FAIL_ON) \
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--print 10 \
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--output $(REPORT_FILE_INPUT)
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# ----------------------------------------
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#### Setup / configure Make to use with our project
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MAKEFLAGS += --warn-undefined-variables
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SHELL := bash
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.SHELLFLAGS := -eu -o pipefail -c
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.DEFAULT_GOAL := all
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.DELETE_ON_ERROR:
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.SUFFIXES:
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.SECONDARY:
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# Create any of these directories if they don't exist
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$(REQUIRED_DIRS):
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mkdir -p $@
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# Cleanup - Remove build and release files
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.PHONY: clean
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clean:
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@[ "${config.REPORTS_DIR}" ] || ( echo ">> config.REPORTS_DIR is not set"; exit 1 )
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rm -rf $(config.REPORTS_DIR)
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rm -rf $(combined-file)
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