Include hidden files when running nak

spec/app/project-spec.coffee

@@ -284,6 +284,22 @@ describe "Project", ->
             expect(paths.length).toBe 0
             expect(matches.length).toBe 0
 
+      it "includes files and folders that begin with a '.'", ->
+        projectPath = '/tmp/atom-tests/folder-with-dot-file'
+        filePath = fsUtils.join(projectPath, '.text')
+        fsUtils.write(filePath, 'match this')
+        project.setPath(projectPath)
+        paths = []
+        matches = []
+        waitsForPromise ->
+          project.scan /match this/, ({path, match, range}) ->
+            paths.push(path)
+            matches.push(match)
+
+        runs ->
+          expect(paths.length).toBe 1
+          expect(paths[0]).toBe filePath
+          expect(matches.length).toBe 1
 
   describe "serialization", ->
     it "restores the project path", ->

src/app/project.coffee

@@ -196,7 +196,7 @@ class Project
         readLine(line) if state is 'readingLines'
 
     command = require.resolve('nak')
-    args = ['--ackmate', regex.source, @getPath()]
+    args = ['--hidden', '--ackmate', regex.source, @getPath()]
     args.unshift("--addVCSIgnores") if config.get('core.excludeVcsIgnoredPaths')
     new BufferedProcess({command, args, stdout, exit})
     deferred

src/packages/fuzzy-finder/lib/load-paths-task.coffee

@@ -15,6 +15,7 @@ class LoadPathsTask
     args.unshift('--addVCSIgnores') if config.get('core.excludeVcsIgnoredPaths')
     args.unshift('--ignore', ignoredNames.join(',')) if ignoredNames.length > 0
     args.unshift('--follow')
+    args.unshift('--hidden')
 
     paths = []
     exit = (code) =>