chore: update docs and root test

chore: update yaml for tests
chore: update yaml tag for tools
2026-01-27 08:18:27 -05:00 · 2026-01-22 22:06:56 -08:00 · 2026-01-22 17:18:57 -08:00 · 2026-01-22 17:11:12 -08:00 · 2026-01-21 22:49:22 -08:00 · 2026-01-21 22:49:06 -08:00
100 changed files with 422 additions and 2692 deletions
--- a/.ci/integration.cloudbuild.yaml
+++ b/.ci/integration.cloudbuild.yaml
@@ -87,7 +87,7 @@ steps:
      - "CLOUD_SQL_POSTGRES_REGION=$_REGION"
      - "SERVICE_ACCOUNT_EMAIL=$SERVICE_ACCOUNT_EMAIL"
    secretEnv:
-      ["CLOUD_SQL_POSTGRES_USER", "CLOUD_SQL_POSTGRES_PASS", "CLIENT_ID", "API_KEY"]
+      ["CLOUD_SQL_POSTGRES_USER", "CLOUD_SQL_POSTGRES_PASS", "CLIENT_ID"]
    volumes:
      - name: "go"
        path: "/gopath"
@@ -134,7 +134,7 @@ steps:
      - "ALLOYDB_POSTGRES_DATABASE=$_DATABASE_NAME"
      - "ALLOYDB_POSTGRES_REGION=$_REGION"
      - "SERVICE_ACCOUNT_EMAIL=$SERVICE_ACCOUNT_EMAIL"
-    secretEnv: ["ALLOYDB_POSTGRES_USER", "ALLOYDB_POSTGRES_PASS", "CLIENT_ID", "API_KEY"]
+    secretEnv: ["ALLOYDB_POSTGRES_USER", "ALLOYDB_POSTGRES_PASS", "CLIENT_ID"]
    volumes:
      - name: "go"
        path: "/gopath"
@@ -293,7 +293,7 @@ steps:
        .ci/test_with_coverage.sh \
          "Cloud Healthcare API" \
          cloudhealthcare \
-          cloudhealthcare
+          cloudhealthcare || echo "Integration tests failed."

  - id: "postgres"
    name: golang:1
@@ -305,7 +305,7 @@ steps:
      - "POSTGRES_HOST=$_POSTGRES_HOST"
      - "POSTGRES_PORT=$_POSTGRES_PORT"
      - "SERVICE_ACCOUNT_EMAIL=$SERVICE_ACCOUNT_EMAIL"
-    secretEnv: ["POSTGRES_USER", "POSTGRES_PASS", "CLIENT_ID", "API_KEY"]
+    secretEnv: ["POSTGRES_USER", "POSTGRES_PASS", "CLIENT_ID"]
    volumes:
      - name: "go"
        path: "/gopath"
@@ -964,13 +964,6 @@ steps:

 availableSecrets:
  secretManager:
-    # Common secrets
-    - versionName: projects/$PROJECT_ID/secrets/client_id/versions/latest
-      env: CLIENT_ID
-    - versionName: projects/$PROJECT_ID/secrets/api_key/versions/latest
-      env: API_KEY
-
-    # Resource-specific secrets
    - versionName: projects/$PROJECT_ID/secrets/cloud_sql_pg_user/versions/latest
      env: CLOUD_SQL_POSTGRES_USER
    - versionName: projects/$PROJECT_ID/secrets/cloud_sql_pg_pass/versions/latest
@@ -987,6 +980,8 @@ availableSecrets:
      env: POSTGRES_USER
    - versionName: projects/$PROJECT_ID/secrets/postgres_pass/versions/latest
      env: POSTGRES_PASS
+    - versionName: projects/$PROJECT_ID/secrets/client_id/versions/latest
+      env: CLIENT_ID
    - versionName: projects/$PROJECT_ID/secrets/neo4j_user/versions/latest
      env: NEO4J_USER
    - versionName: projects/$PROJECT_ID/secrets/neo4j_pass/versions/latest
--- a/.github/workflows/deploy_dev_docs.yaml
+++ b/.github/workflows/deploy_dev_docs.yaml
@@ -51,12 +51,12 @@ jobs:
          extended: true

      - name: Setup Node
-        uses: actions/setup-node@6044e13b5dc448c55e2357c09f80417699197238 # v6
+        uses: actions/setup-node@395ad3262231945c25e8478fd5baf05154b1d79f # v6
        with:
          node-version: "22"

      - name: Cache dependencies
-        uses: actions/cache@8b402f58fbc84540c8b491a91e594a4576fec3d7 # v5
+        uses: actions/cache@9255dc7a253b0ccc959486e2bca901246202afeb # v5
        with:
          path: ~/.npm
          key: ${{ runner.os }}-node-${{ hashFiles('**/package-lock.json') }}
--- a/.github/workflows/deploy_previous_version_docs.yaml
+++ b/.github/workflows/deploy_previous_version_docs.yaml
@@ -57,7 +57,7 @@ jobs:
        with:
          hugo-version: "0.145.0"
          extended: true
-      - uses: actions/setup-node@6044e13b5dc448c55e2357c09f80417699197238 # v6
+      - uses: actions/setup-node@395ad3262231945c25e8478fd5baf05154b1d79f # v6
        with:
          node-version: "22"

--- a/.github/workflows/deploy_versioned_docs.yaml
+++ b/.github/workflows/deploy_versioned_docs.yaml
@@ -44,7 +44,7 @@ jobs:
          extended: true

      - name: Setup Node
-        uses: actions/setup-node@6044e13b5dc448c55e2357c09f80417699197238 # v6
+        uses: actions/setup-node@395ad3262231945c25e8478fd5baf05154b1d79f # v6
        with:
          node-version: "22"

--- a/.github/workflows/docs_preview_deploy.yaml
+++ b/.github/workflows/docs_preview_deploy.yaml
@@ -62,12 +62,12 @@ jobs:
          extended: true

      - name: Setup Node
-        uses: actions/setup-node@6044e13b5dc448c55e2357c09f80417699197238 # v6
+        uses: actions/setup-node@395ad3262231945c25e8478fd5baf05154b1d79f # v6
        with:
          node-version: "22"

      - name: Cache dependencies
-        uses: actions/cache@8b402f58fbc84540c8b491a91e594a4576fec3d7 # v5
+        uses: actions/cache@9255dc7a253b0ccc959486e2bca901246202afeb # v5
        with:
          path: ~/.npm
          key: ${{ runner.os }}-node-${{ hashFiles('**/package-lock.json') }}
--- a/.github/workflows/link_checker_workflow.yaml
+++ b/.github/workflows/link_checker_workflow.yaml
@@ -25,7 +25,7 @@ jobs:
        uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6

      - name: Restore lychee cache
-        uses: actions/cache@8b402f58fbc84540c8b491a91e594a4576fec3d7 # v5
+        uses: actions/cache@9255dc7a253b0ccc959486e2bca901246202afeb # v5
        with:
          path: .lycheecache
          key: cache-lychee-${{ github.sha }}
@@ -39,7 +39,6 @@ jobs:
            --no-progress
            --cache
            --max-cache-age 1d
-            --exclude '^neo4j\+.*' --exclude '^bolt://.*'
            README.md
            docs/
          output: /tmp/foo.txt
--- a/.github/workflows/lint.yaml
+++ b/.github/workflows/lint.yaml
@@ -51,11 +51,11 @@ jobs:
              console.log('Failed to remove label. Another job may have already removed it!');
            }
      - name: Setup Go
-        uses: actions/setup-go@7a3fe6cf4cb3a834922a1244abfce67bcef6a0c5 # v6.2.0
+        uses: actions/setup-go@4dc6199c7b1a012772edbd06daecab0f50c9053c # v6.1.0
        with:
          go-version: "1.25"
      - name: Checkout code
-        uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
+        uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1
        with:
          ref: ${{ github.event.pull_request.head.sha }}
          repository: ${{ github.event.pull_request.head.repo.full_name }}
--- a/.github/workflows/sync-labels.yaml
+++ b/.github/workflows/sync-labels.yaml
@@ -29,7 +29,7 @@ jobs:
      issues: 'write'
      pull-requests: 'write'
    steps:
-      - uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
+      - uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1
      - uses: micnncim/action-label-syncer@3abd5ab72fda571e69fffd97bd4e0033dd5f495c # v1.3.0
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
--- a/.github/workflows/tests.yaml
+++ b/.github/workflows/tests.yaml
@@ -57,12 +57,12 @@ jobs:
            }

      - name: Setup Go
-        uses: actions/setup-go@7a3fe6cf4cb3a834922a1244abfce67bcef6a0c5 # v6.2.0
+        uses: actions/setup-go@4dc6199c7b1a012772edbd06daecab0f50c9053c # v6.1.0
        with:
          go-version: "1.24"

      - name: Checkout code
-        uses: actions/checkout@de0fac2e4500dabe0009e67214ff5f5447ce83dd # v6.0.2
+        uses: actions/checkout@8e8c483db84b4bee98b60c0593521ed34d9990e8 # v6.0.1
        with:
          ref: ${{ github.event.pull_request.head.sha }}
          repository: ${{ github.event.pull_request.head.repo.full_name }}
--- a/.hugo/hugo.toml
+++ b/.hugo/hugo.toml
@@ -51,10 +51,6 @@ ignoreFiles = ["quickstart/shared", "quickstart/python", "quickstart/js", "quick
 # Add a new version block here before every release
 # The order of versions in this file is mirrored into the dropdown

-[[params.versions]]
-  version = "v0.26.0"
-  url = "https://googleapis.github.io/genai-toolbox/v0.26.0/"
-
 [[params.versions]]
  version = "v0.25.0"
  url = "https://googleapis.github.io/genai-toolbox/v0.25.0/"
--- a/.lycheeignore
+++ b/.lycheeignore
@@ -39,7 +39,7 @@ https://dev.mysql.com/doc/refman/8.4/en/user-names.html
 # npmjs links can occasionally trigger rate limiting during high-frequency CI builds
 https://www.npmjs.com/package/@toolbox-sdk/core
 https://www.npmjs.com/package/@toolbox-sdk/adk
-https://www.oceanbase.com/
+

 # Ignore social media and blog profiles to reduce external request overhead
-https://medium.com/@mcp_toolbox
+https://medium.com/@mcp_toolbox
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -1,30 +1,5 @@
 # Changelog

-## [0.26.0](https://github.com/googleapis/genai-toolbox/compare/v0.25.0...v0.26.0) (2026-01-22)
-
-
-### ⚠ BREAKING CHANGES
-
-* Validate tool naming ([#2305](https://github.com/googleapis/genai-toolbox/issues/2305)) ([5054212](https://github.com/googleapis/genai-toolbox/commit/5054212fa43017207fe83275d27b9fbab96e8ab5))
-* **tools/cloudgda:** Update description and parameter name for cloudgda tool ([#2288](https://github.com/googleapis/genai-toolbox/issues/2288)) ([6b02591](https://github.com/googleapis/genai-toolbox/commit/6b025917032394a66840488259db8ff2c3063016))
-
-### Features
-
-* Add new `user-agent-metadata` flag ([#2302](https://github.com/googleapis/genai-toolbox/issues/2302)) ([adc9589](https://github.com/googleapis/genai-toolbox/commit/adc9589766904d9e3cbe0a6399222f8d4bb9d0cc))
-* Add remaining flag to Toolbox server in MCP registry ([#2272](https://github.com/googleapis/genai-toolbox/issues/2272)) ([5e0999e](https://github.com/googleapis/genai-toolbox/commit/5e0999ebf5cdd9046e96857738254b2e0561b6d2))
-* **embeddingModel:** Add embedding model to MCP handler ([#2310](https://github.com/googleapis/genai-toolbox/issues/2310)) ([e4f60e5](https://github.com/googleapis/genai-toolbox/commit/e4f60e56335b755ef55b9553d3f40b31858ec8d9))
-* **sources/bigquery:** Make maximum rows returned from queries configurable ([#2262](https://github.com/googleapis/genai-toolbox/issues/2262)) ([4abf0c3](https://github.com/googleapis/genai-toolbox/commit/4abf0c39e717d53b22cc61efb65e09928c598236))
-* **prebuilt/cloud-sql:** Add create backup tool for Cloud SQL ([#2141](https://github.com/googleapis/genai-toolbox/issues/2141)) ([8e0fb03](https://github.com/googleapis/genai-toolbox/commit/8e0fb0348315a80f63cb47b3c7204869482448f4))
-* **prebuilt/cloud-sql:** Add restore backup tool for Cloud SQL ([#2171](https://github.com/googleapis/genai-toolbox/issues/2171)) ([00c3e6d](https://github.com/googleapis/genai-toolbox/commit/00c3e6d8cba54e2ab6cb271c7e6b378895df53e1))
-* Support combining multiple prebuilt configurations ([#2295](https://github.com/googleapis/genai-toolbox/issues/2295)) ([e535b37](https://github.com/googleapis/genai-toolbox/commit/e535b372ea81864d644a67135a1b07e4e519b4b4))
-* Support MCP specs version 2025-11-25 ([#2303](https://github.com/googleapis/genai-toolbox/issues/2303)) ([4d23a3b](https://github.com/googleapis/genai-toolbox/commit/4d23a3bbf2797b1f7fe328aeb5789e778121da23))
-* **tools:** Add `valueFromParam` support to Tool config ([#2333](https://github.com/googleapis/genai-toolbox/issues/2333)) ([15101b1](https://github.com/googleapis/genai-toolbox/commit/15101b1edbe2b85a4a5f9f819c23cf83138f4ee1))
-
-
-### Bug Fixes
-
-* **tools/cloudhealthcare:** Add check for client authorization before retrieving token string ([#2327](https://github.com/googleapis/genai-toolbox/issues/2327)) ([c25a233](https://github.com/googleapis/genai-toolbox/commit/c25a2330fea2ac382a398842c9e572e4e19bcb08))
-
 ## [0.25.0](https://github.com/googleapis/genai-toolbox/compare/v0.24.0...v0.25.0) (2026-01-08)


--- a/DEVELOPER.md
+++ b/DEVELOPER.md
@@ -83,7 +83,7 @@ Tool type serves as a category or type that a user can assign to a tool.

 The following guidelines apply to tool types:

-* Should use hyphens over underscores (e.g. `firestore-list-collections` or
+* Should user hyphens over underscores (e.g. `firestore-list-collections` or
  `firestore_list_colelctions`).
 * Should use product name in name (e.g. `firestore-list-collections` over
  `list-collections`).
--- a/README.md
+++ b/README.md
@@ -140,7 +140,7 @@ To install Toolbox as a binary:
 >
 > ```sh
 > # see releases page for other versions
-> export VERSION=0.26.0
+> export VERSION=0.25.0
 > curl -L -o toolbox https://storage.googleapis.com/genai-toolbox/v$VERSION/linux/amd64/toolbox
 > chmod +x toolbox
 > ```
@@ -153,7 +153,7 @@ To install Toolbox as a binary:
 >
 > ```sh
 > # see releases page for other versions
-> export VERSION=0.26.0
+> export VERSION=0.25.0
 > curl -L -o toolbox https://storage.googleapis.com/genai-toolbox/v$VERSION/darwin/arm64/toolbox
 > chmod +x toolbox
 > ```
@@ -166,7 +166,7 @@ To install Toolbox as a binary:
 >
 > ```sh
 > # see releases page for other versions
-> export VERSION=0.26.0
+> export VERSION=0.25.0
 > curl -L -o toolbox https://storage.googleapis.com/genai-toolbox/v$VERSION/darwin/amd64/toolbox
 > chmod +x toolbox
 > ```
@@ -179,7 +179,7 @@ To install Toolbox as a binary:
 >
 > ```cmd
 > :: see releases page for other versions
-> set VERSION=0.26.0
+> set VERSION=0.25.0
 > curl -o toolbox.exe "https://storage.googleapis.com/genai-toolbox/v%VERSION%/windows/amd64/toolbox.exe"
 > ```
 >
@@ -191,7 +191,7 @@ To install Toolbox as a binary:
 >
 > ```powershell
 > # see releases page for other versions
-> $VERSION = "0.26.0"
+> $VERSION = "0.25.0"
 > curl.exe -o toolbox.exe "https://storage.googleapis.com/genai-toolbox/v$VERSION/windows/amd64/toolbox.exe"
 > ```
 >
@@ -204,7 +204,7 @@ You can also install Toolbox as a container:

 ```sh
 # see releases page for other versions
-export VERSION=0.26.0
+export VERSION=0.25.0
 docker pull us-central1-docker.pkg.dev/database-toolbox/toolbox/toolbox:$VERSION
 ```

@@ -228,7 +228,7 @@ To install from source, ensure you have the latest version of
 [Go installed](https://go.dev/doc/install), and then run the following command:

 ```sh
-go install github.com/googleapis/genai-toolbox@v0.26.0
+go install github.com/googleapis/genai-toolbox@v0.25.0
 ```
 <!-- {x-release-please-end} -->

--- a/cmd/root.go
+++ b/cmd/root.go
@@ -99,7 +99,6 @@ import (
 	_ "github.com/googleapis/genai-toolbox/internal/tools/cloudsql/cloudsqlgetinstances"
 	_ "github.com/googleapis/genai-toolbox/internal/tools/cloudsql/cloudsqllistdatabases"
 	_ "github.com/googleapis/genai-toolbox/internal/tools/cloudsql/cloudsqllistinstances"
-	_ "github.com/googleapis/genai-toolbox/internal/tools/cloudsql/cloudsqlrestorebackup"
 	_ "github.com/googleapis/genai-toolbox/internal/tools/cloudsql/cloudsqlwaitforoperation"
 	_ "github.com/googleapis/genai-toolbox/internal/tools/cloudsqlmssql/cloudsqlmssqlcreateinstance"
 	_ "github.com/googleapis/genai-toolbox/internal/tools/cloudsqlmysql/cloudsqlmysqlcreateinstance"
@@ -316,15 +315,15 @@ func Execute() {
 type Command struct {
 	*cobra.Command

-	cfg             server.ServerConfig
-	logger          log.Logger
-	tools_file      string
-	tools_files     []string
-	tools_folder    string
-	prebuiltConfigs []string
-	inStream        io.Reader
-	outStream       io.Writer
-	errStream       io.Writer
+	cfg            server.ServerConfig
+	logger         log.Logger
+	tools_file     string
+	tools_files    []string
+	tools_folder   string
+	prebuiltConfig string
+	inStream       io.Reader
+	outStream      io.Writer
+	errStream      io.Writer
 }

 // NewCommand returns a Command object representing an invocation of the CLI.
@@ -377,17 +376,16 @@ func NewCommand(opts ...Option) *Command {
 	flags.StringVar(&cmd.cfg.TelemetryServiceName, "telemetry-service-name", "toolbox", "Sets the value of the service.name resource attribute for telemetry data.")
 	// Fetch prebuilt tools sources to customize the help description
 	prebuiltHelp := fmt.Sprintf(
-		"Use a prebuilt tool configuration by source type. Allowed: '%s'. Can be specified multiple times.",
+		"Use a prebuilt tool configuration by source type. Allowed: '%s'.",
 		strings.Join(prebuiltconfigs.GetPrebuiltSources(), "', '"),
 	)
-	flags.StringSliceVar(&cmd.prebuiltConfigs, "prebuilt", []string{}, prebuiltHelp)
+	flags.StringVar(&cmd.prebuiltConfig, "prebuilt", "", prebuiltHelp)
 	flags.BoolVar(&cmd.cfg.Stdio, "stdio", false, "Listens via MCP STDIO instead of acting as a remote HTTP server.")
 	flags.BoolVar(&cmd.cfg.DisableReload, "disable-reload", false, "Disables dynamic reloading of tools file.")
 	flags.BoolVar(&cmd.cfg.UI, "ui", false, "Launches the Toolbox UI web server.")
 	// TODO: Insecure by default. Might consider updating this for v1.0.0
 	flags.StringSliceVar(&cmd.cfg.AllowedOrigins, "allowed-origins", []string{"*"}, "Specifies a list of origins permitted to access this server. Defaults to '*'.")
 	flags.StringSliceVar(&cmd.cfg.AllowedHosts, "allowed-hosts", []string{"*"}, "Specifies a list of hosts permitted to access this server. Defaults to '*'.")
-	flags.StringSliceVar(&cmd.cfg.UserAgentMetadata, "user-agent-metadata", []string{}, "Appends additional metadata to the User-Agent.")

 	// wrap RunE command so that we have access to original Command object
 	cmd.RunE = func(*cobra.Command, []string) error { return run(cmd) }
@@ -427,124 +425,101 @@ func parseEnv(input string) (string, error) {
 	return output, err
 }

-func convertToolsFile(raw []byte) ([]byte, error) {
+func convertToolsFile(ctx context.Context, raw []byte) ([]byte, error) {
 	var input yaml.MapSlice
 	decoder := yaml.NewDecoder(bytes.NewReader(raw), yaml.UseOrderedMap())
+	if err := decoder.Decode(&input); err != nil {
+		return nil, err
+	}

+	// Convert raw MapSlice to a helper map for quick lookup
+	// while keeping the values as MapSlices to preserve internal order
+	resourceOrder := []string{}
+	lookup := make(map[string]yaml.MapSlice)
+	for _, item := range input {
+		key, ok := item.Key.(string)
+		if !ok {
+			return nil, fmt.Errorf("unexpected non-string key in input: %v", item.Key)
+		}
+		if slice, ok := item.Value.(yaml.MapSlice); ok {
+			// convert authSources to authServices
+			if key == "authSources" {
+				key = "authServices"
+			}
+			// works even if lookup[key] is nil
+			lookup[key] = append(lookup[key], slice...)
+			// preserving the resource's order of original toolsFile
+			if !slices.Contains(resourceOrder, key) {
+				resourceOrder = append(resourceOrder, key)
+			}
+		} else {
+			// toolsfile is already v2
+			if key == "kind" {
+				return raw, nil
+			}
+			return nil, fmt.Errorf("'%s' is not a map", key)
+		}
+	}
 	// convert to tools file v2
 	var buf bytes.Buffer
 	encoder := yaml.NewEncoder(&buf)
-
-	v1keys := []string{"sources", "authSources", "authServices", "embeddingModels", "tools", "toolsets", "prompts"}
-	for {
-		if err := decoder.Decode(&input); err != nil {
-			if err == io.EOF {
-				break
-			}
-			return nil, err
+	for _, kind := range resourceOrder {
+		data, exists := lookup[kind]
+		if !exists {
+			// if this is skipped for all keys, the tools file is in v2
+			continue
 		}
-		for _, item := range input {
-			key, ok := item.Key.(string)
+		// Transform each entry
+		for _, entry := range data {
+			entryName, ok := entry.Key.(string)
 			if !ok {
-				return nil, fmt.Errorf("unexpected non-string key in input: %v", item.Key)
+				return nil, fmt.Errorf("unexpected non-string key for entry in '%s': %v", kind, entry.Key)
 			}
-			// check if the key is config file v1's key
-			if slices.Contains(v1keys, key) {
-				// check if value conversion to yaml.MapSlice successfully
-				// fields such as "tools" in toolsets might pass the first check but
-				// fail to convert to MapSlice
-				if slice, ok := item.Value.(yaml.MapSlice); ok {
-					// Deprecated: convert authSources to authServices
-					if key == "authSources" {
-						key = "authServices"
-					}
-					transformed, err := transformDocs(key, slice)
-					if err != nil {
-						return nil, err
-					}
-					// encode per-doc
-					for _, doc := range transformed {
-						if err := encoder.Encode(doc); err != nil {
-							return nil, err
-						}
-					}
-				} else {
-					// invalid input will be ignored
-					// we don't want to throw error here since the config could
-					// be valid but with a different order such as:
-					// ---
-					// tools:
-					// - tool_a
-					// kind: toolsets
-					// ---
-					continue
-				}
+			entryBody := ProcessValue(entry.Value, kind == "toolsets")
+
+			transformed := yaml.MapSlice{
+				{Key: "kind", Value: kind},
+				{Key: "name", Value: entryName},
+			}
+
+			// Merge the transformed body into our result
+			if bodySlice, ok := entryBody.(yaml.MapSlice); ok {
+				transformed = append(transformed, bodySlice...)
 			} else {
-				// this doc is already v2, encode to buf
-				if err := encoder.Encode(input); err != nil {
-					return nil, err
-				}
-				break
+				return nil, fmt.Errorf("unable to convert entryBody to MapSlice")
+			}
+
+			if err := encoder.Encode(transformed); err != nil {
+				return nil, err
 			}
 		}
 	}
 	return buf.Bytes(), nil
 }

-// transformDocs transforms the configuration file from v1 format to v2
-// yaml.MapSlice will preserve the order in a map
-func transformDocs(kind string, input yaml.MapSlice) ([]yaml.MapSlice, error) {
-	var transformed []yaml.MapSlice
-	for _, entry := range input {
-		entryName, ok := entry.Key.(string)
-		if !ok {
-			return nil, fmt.Errorf("unexpected non-string key for entry in '%s': %v", kind, entry.Key)
-		}
-		entryBody := ProcessValue(entry.Value, kind == "toolsets")
-
-		currentTransformed := yaml.MapSlice{
-			{Key: "kind", Value: kind},
-			{Key: "name", Value: entryName},
-		}
-
-		// Merge the transformed body into our result
-		if bodySlice, ok := entryBody.(yaml.MapSlice); ok {
-			currentTransformed = append(currentTransformed, bodySlice...)
-		} else {
-			return nil, fmt.Errorf("unable to convert entryBody to MapSlice")
-		}
-		transformed = append(transformed, currentTransformed)
-	}
-	return transformed, nil
-}
-
 // ProcessValue recursively looks for MapSlices to rename 'kind' -> 'type'
 func ProcessValue(v any, isToolset bool) any {
 	switch val := v.(type) {
 	case yaml.MapSlice:
-		// creating a new MapSlice is safer for recursive transformation
-		newVal := make(yaml.MapSlice, len(val))
-		for i, item := range val {
+		for i := range val {
 			// Perform renaming
-			if item.Key == "kind" {
-				item.Key = "type"
+			if val[i].Key == "kind" {
+				val[i].Key = "type"
 			}
 			// Recursive call for nested values (e.g., nested objects or lists)
-			item.Value = ProcessValue(item.Value, false)
-			newVal[i] = item
+			val[i].Value = ProcessValue(val[i].Value, false)
 		}
-		return newVal
+		return val
 	case []any:
 		// Process lists: If it's a toolset top-level list, wrap it.
 		if isToolset {
 			return yaml.MapSlice{{Key: "tools", Value: val}}
 		}
 		// Otherwise, recurse into list items (to catch nested objects)
-		newVal := make([]any, len(val))
 		for i := range val {
-			newVal[i] = ProcessValue(val[i], false)
+			val[i] = ProcessValue(val[i], false)
 		}
-		return newVal
+		return val
 	default:
 		return val
 	}
@@ -560,7 +535,7 @@ func parseToolsFile(ctx context.Context, raw []byte) (ToolsFile, error) {
 	}
 	raw = []byte(output)

-	raw, err = convertToolsFile(raw)
+	raw, err = convertToolsFile(ctx, raw)
 	if err != nil {
 		return toolsFile, fmt.Errorf("error converting tools file: %s", err)
 	}
@@ -983,32 +958,24 @@ func run(cmd *Command) error {
 	var allToolsFiles []ToolsFile

 	// Load Prebuilt Configuration
-
-	if len(cmd.prebuiltConfigs) > 0 {
-		slices.Sort(cmd.prebuiltConfigs)
-		sourcesList := strings.Join(cmd.prebuiltConfigs, ", ")
-		logMsg := fmt.Sprintf("Using prebuilt tool configurations for: %s", sourcesList)
-		cmd.logger.InfoContext(ctx, logMsg)
-
-		for _, configName := range cmd.prebuiltConfigs {
-			buf, err := prebuiltconfigs.Get(configName)
-			if err != nil {
-				cmd.logger.ErrorContext(ctx, err.Error())
-				return err
-			}
-
-			// Update version string
-			cmd.cfg.Version += "+prebuilt." + configName
-
-			// Parse into ToolsFile struct
-			parsed, err := parseToolsFile(ctx, buf)
-			if err != nil {
-				errMsg := fmt.Errorf("unable to parse prebuilt tool configuration for '%s': %w", configName, err)
-				cmd.logger.ErrorContext(ctx, errMsg.Error())
-				return errMsg
-			}
-			allToolsFiles = append(allToolsFiles, parsed)
+	if cmd.prebuiltConfig != "" {
+		buf, err := prebuiltconfigs.Get(cmd.prebuiltConfig)
+		if err != nil {
+			cmd.logger.ErrorContext(ctx, err.Error())
+			return err
 		}
+		logMsg := fmt.Sprint("Using prebuilt tool configuration for ", cmd.prebuiltConfig)
+		cmd.logger.InfoContext(ctx, logMsg)
+		// Append prebuilt.source to Version string for the User Agent
+		cmd.cfg.Version += "+prebuilt." + cmd.prebuiltConfig
+
+		parsed, err := parseToolsFile(ctx, buf)
+		if err != nil {
+			errMsg := fmt.Errorf("unable to parse prebuilt tool configuration: %w", err)
+			cmd.logger.ErrorContext(ctx, errMsg.Error())
+			return errMsg
+		}
+		allToolsFiles = append(allToolsFiles, parsed)
 	}

 	// Determine if Custom Files should be loaded
@@ -1016,7 +983,7 @@ func run(cmd *Command) error {
 	isCustomConfigured := cmd.tools_file != "" || len(cmd.tools_files) > 0 || cmd.tools_folder != ""

 	// Determine if default 'tools.yaml' should be used (No prebuilt AND No custom flags)
-	useDefaultToolsFile := len(cmd.prebuiltConfigs) == 0 && !isCustomConfigured
+	useDefaultToolsFile := cmd.prebuiltConfig == "" && !isCustomConfigured

 	if useDefaultToolsFile {
 		cmd.tools_file = "tools.yaml"
--- a/cmd/root_test.go
+++ b/cmd/root_test.go
@@ -23,12 +23,14 @@ import (
 	"os"
 	"path"
 	"path/filepath"
+	"reflect"
 	"regexp"
 	"runtime"
 	"strings"
 	"testing"
 	"time"

+	yaml "github.com/goccy/go-yaml"
 	"github.com/google/go-cmp/cmp"

 	"github.com/googleapis/genai-toolbox/internal/auth/google"
@@ -70,9 +72,6 @@ func withDefaults(c server.ServerConfig) server.ServerConfig {
 	if c.AllowedHosts == nil {
 		c.AllowedHosts = []string{"*"}
 	}
-	if c.UserAgentMetadata == nil {
-		c.UserAgentMetadata = []string{}
-	}
 	return c
 }

@@ -233,13 +232,6 @@ func TestServerConfigFlags(t *testing.T) {
 				AllowedHosts: []string{"http://foo.com", "http://bar.com"},
 			}),
 		},
-		{
-			desc: "user agent metadata",
-			args: []string{"--user-agent-metadata", "foo,bar"},
-			want: withDefaults(server.ServerConfig{
-				UserAgentMetadata: []string{"foo", "bar"},
-			}),
-		},
 	}
 	for _, tc := range tcs {
 		t.Run(tc.desc, func(t *testing.T) {
@@ -430,27 +422,17 @@ func TestPrebuiltFlag(t *testing.T) {
 	tcs := []struct {
 		desc string
 		args []string
-		want []string
+		want string
 	}{
 		{
 			desc: "default value",
 			args: []string{},
-			want: []string{},
+			want: "",
 		},
 		{
-			desc: "single prebuilt flag",
-			args: []string{"--prebuilt", "alloydb"},
-			want: []string{"alloydb"},
-		},
-		{
-			desc: "multiple prebuilt flags",
-			args: []string{"--prebuilt", "alloydb", "--prebuilt", "bigquery"},
-			want: []string{"alloydb", "bigquery"},
-		},
-		{
-			desc: "comma separated prebuilt flags",
-			args: []string{"--prebuilt", "alloydb,bigquery"},
-			want: []string{"alloydb", "bigquery"},
+			desc: "custom pre built flag",
+			args: []string{"--tools-file", "alloydb"},
+			want: "alloydb",
 		},
 	}
 	for _, tc := range tcs {
@@ -459,8 +441,8 @@ func TestPrebuiltFlag(t *testing.T) {
 			if err != nil {
 				t.Fatalf("unexpected error invoking command: %s", err)
 			}
-			if diff := cmp.Diff(c.prebuiltConfigs, tc.want); diff != "" {
-				t.Fatalf("got %v, want %v, diff %s", c.prebuiltConfigs, tc.want, diff)
+			if c.tools_file != tc.want {
+				t.Fatalf("got %v, want %v", c.cfg, tc.want)
 			}
 		})
 	}
@@ -515,6 +497,18 @@ func TestDefaultLogLevel(t *testing.T) {
 }

 func TestConvertToolsFile(t *testing.T) {
+	ctx, cancelCtx := context.WithTimeout(context.Background(), time.Minute)
+	defer cancelCtx()
+	pr, pw := io.Pipe()
+	defer pw.Close()
+	defer pr.Close()
+
+	logger, err := log.NewStdLogger(pw, pw, "DEBUG")
+	if err != nil {
+		t.Fatalf("failed to setup logger %s", err)
+	}
+	ctx = util.WithLogger(ctx, logger)
+
 	tcs := []struct {
 		desc   string
 		in     string
@@ -543,7 +537,8 @@ func TestConvertToolsFile(t *testing.T) {
                    kind: postgres-sql
                    source: my-pg-instance
                    description: some description
-                    statement: SELECT * FROM SQL_STATEMENT;
+                    statement: |
+                      SELECT * FROM SQL_STATEMENT;
                    parameters:
                        - name: country
                          type: string
@@ -565,7 +560,8 @@ func TestConvertToolsFile(t *testing.T) {
                    model: gemini-embedding-001
                    apiKey: some-key
                    dimension: 768`,
-			want: `kind: sources
+			want: `
+kind: sources
 name: my-pg-instance
 type: cloud-sql-postgres
 project: my-project
@@ -585,7 +581,8 @@ name: example_tool
 type: postgres-sql
 source: my-pg-instance
 description: some description
-statement: SELECT * FROM SQL_STATEMENT;
+statement: |
+    SELECT * FROM SQL_STATEMENT;
 parameters:
 - name: country
  type: string
@@ -610,18 +607,18 @@ name: gemini-model
 type: gemini
 model: gemini-embedding-001
 apiKey: some-key
-dimension: 768
-`,
+dimension: 768`,
 		},
 		{
-			desc: "preserve resource order",
+			desc: "preserve resource order with grouping",
 			in: `
            tools:
                example_tool:
                    kind: postgres-sql
                    source: my-pg-instance
                    description: some description
-                    statement: SELECT * FROM SQL_STATEMENT;
+                    statement: |
+                        SELECT * FROM SQL_STATEMENT;
                    parameters:
                        - name: country
                          type: string
@@ -643,136 +640,23 @@ dimension: 768
                example_toolset:
                    - example_tool
            authSources:
-                my-google-auth2:
-                    kind: google
-                    clientId: testing-id`,
-			want: `kind: tools
-name: example_tool
-type: postgres-sql
-source: my-pg-instance
-description: some description
-statement: SELECT * FROM SQL_STATEMENT;
-parameters:
- name: country
-  type: string
-  description: some description
---
-kind: sources
-name: my-pg-instance
-type: cloud-sql-postgres
-project: my-project
-region: my-region
-instance: my-instance
-database: my_db
-user: my_user
-password: my_pass
---
-kind: authServices
-name: my-google-auth
-type: google
-clientId: testing-id
---
-kind: toolsets
-name: example_toolset
-tools:
- example_tool
---
-kind: authServices
-name: my-google-auth2
-type: google
-clientId: testing-id
-`,
-		},
-		{
-			desc: "convert combination of v1 and v2",
-			in: `
-            sources:
-                my-pg-instance:
-                    kind: cloud-sql-postgres
-                    project: my-project
-                    region: my-region
-                    instance: my-instance
-                    database: my_db
-                    user: my_user
-                    password: my_pass
-            authServices:
                my-google-auth:
                    kind: google
-                    clientId: testing-id
-            tools:
-                example_tool:
-                    kind: postgres-sql
-                    source: my-pg-instance
-                    description: some description
-                    statement: SELECT * FROM SQL_STATEMENT;
-                    parameters:
-                        - name: country
-                          type: string
-                          description: some description
-            toolsets:
-                example_toolset:
-                    - example_tool
-            prompts:
-                code_review:
-                    description: ask llm to analyze code quality
-                    messages:
-                      - content: "please review the following code for quality: {{.code}}"
-                    arguments:
-                        - name: code
-                          description: the code to review
-            embeddingModels:
-                gemini-model:
-                    kind: gemini
-                    model: gemini-embedding-001
-                    apiKey: some-key
-                    dimension: 768
+                    clientId: testing-id`,
+			want: `
+kind: tools
+name: example_tool
+type: postgres-sql
+source: my-pg-instance
+description: some description
+statement: |
+    SELECT * FROM SQL_STATEMENT;
+parameters:
+- name: country
+  type: string
+  description: some description
 ---
-            kind: sources
-            name: my-pg-instance2
-            type: cloud-sql-postgres
-            project: my-project
-            region: my-region
-            instance: my-instance
---
-            kind: authServices
-            name: my-google-auth2
-            type: google
-            clientId: testing-id
---
-            kind: tools
-            name: example_tool2
-            type: postgres-sql
-            source: my-pg-instance
-            description: some description
-            statement: SELECT * FROM SQL_STATEMENT;
-            parameters:
-            - name: country
-              type: string
-              description: some description
---
-            kind: toolsets
-            name: example_toolset2
-            tools:
-            - example_tool
---
-            tools:
-            - example_tool
-            kind: toolsets
-            name: example_toolset3
---
-            kind: prompts
-            name: code_review2
-            description: ask llm to analyze code quality
-            messages:
-            - content: "please review the following code for quality: {{.code}}"
-            arguments:
-            - name: code
-              description: the code to review
---
-            kind: embeddingModels
-            name: gemini-model2
-            type: gemini`,
-			want: `kind: sources
+kind: sources
 name: my-pg-instance
 type: cloud-sql-postgres
 project: my-project
@@ -787,88 +671,20 @@ name: my-google-auth
 type: google
 clientId: testing-id
 ---
-kind: tools
-name: example_tool
-type: postgres-sql
-source: my-pg-instance
-description: some description
-statement: SELECT * FROM SQL_STATEMENT;
-parameters:
- name: country
-  type: string
-  description: some description
+kind: authServices
+name: my-google-auth
+type: google
+clientId: testing-id
 ---
 kind: toolsets
 name: example_toolset
 tools:
- example_tool
---
-kind: prompts
-name: code_review
-description: ask llm to analyze code quality
-messages:
- content: "please review the following code for quality: {{.code}}"
-arguments:
- name: code
-  description: the code to review
---
-kind: embeddingModels
-name: gemini-model
-type: gemini
-model: gemini-embedding-001
-apiKey: some-key
-dimension: 768
---
-kind: sources
-name: my-pg-instance2
-type: cloud-sql-postgres
-project: my-project
-region: my-region
-instance: my-instance
---
-kind: authServices
-name: my-google-auth2
-type: google
-clientId: testing-id
---
-kind: tools
-name: example_tool2
-type: postgres-sql
-source: my-pg-instance
-description: some description
-statement: SELECT * FROM SQL_STATEMENT;
-parameters:
- name: country
-  type: string
-  description: some description
---
-kind: toolsets
-name: example_toolset2
-tools:
- example_tool
---
-tools:
- example_tool
-kind: toolsets
-name: example_toolset3
---
-kind: prompts
-name: code_review2
-description: ask llm to analyze code quality
-messages:
- content: "please review the following code for quality: {{.code}}"
-arguments:
- name: code
-  description: the code to review
---
-kind: embeddingModels
-name: gemini-model2
-type: gemini
-`,
+- example_tool`,
 		},
 		{
 			desc: "no convertion needed",
-			in: `kind: sources
+			in: `
+kind: sources
 name: my-pg-instance
 type: cloud-sql-postgres
 project: my-project
@@ -883,7 +699,8 @@ name: example_tool
 type: postgres-sql
 source: my-pg-instance
 description: some description
-statement: SELECT * FROM SQL_STATEMENT;
+statement: |
+    SELECT * FROM SQL_STATEMENT;
 parameters:
 - name: country
  type: string
@@ -893,7 +710,8 @@ kind: toolsets
 name: example_toolset
 tools:
 - example_tool`,
-			want: `kind: sources
+			want: `
+kind: sources
 name: my-pg-instance
 type: cloud-sql-postgres
 project: my-project
@@ -908,7 +726,8 @@ name: example_tool
 type: postgres-sql
 source: my-pg-instance
 description: some description
-statement: SELECT * FROM SQL_STATEMENT;
+statement: |
+    SELECT * FROM SQL_STATEMENT;
 parameters:
 - name: country
  type: string
@@ -917,34 +736,69 @@ parameters:
 kind: toolsets
 name: example_toolset
 tools:
- example_tool
-`,
+- example_tool`,
 		},
 		{
-			desc: "invalid source",
-			in:   `sources: invalid`,
-			want: "",
+			desc:   "invalid source",
+			in:     `sources: invalid`,
+			isErr:  true,
+			errStr: "'sources' is not a map",
 		},
 		{
-			desc: "invalid toolset",
-			in:   `toolsets: invalid`,
-			want: "",
+			desc:   "invalid toolset",
+			in:     `toolsets: invalid`,
+			isErr:  true,
+			errStr: "'toolsets' is not a map",
 		},
 	}
 	for _, tc := range tcs {
 		t.Run(tc.desc, func(t *testing.T) {
-			output, err := convertToolsFile([]byte(tc.in))
+			output, err := convertToolsFile(ctx, []byte(tc.in))
+			if tc.isErr {
+				if err == nil {
+					t.Fatalf("missing error: %s", tc.errStr)
+				}
+				if err.Error() != tc.errStr {
+					t.Fatalf("invalid error string: got %s, want %s", err, tc.errStr)
+				}
+				return
+			}
 			if err != nil {
 				t.Fatalf("unexpected error: %s", err)
 			}

-			if diff := cmp.Diff(string(output), tc.want); diff != "" {
-				t.Fatalf("incorrect toolsets parse: diff %v", diff)
+			var docs1, docs2 []yaml.MapSlice
+			if docs1, err = decodeToMapSlice(string(output)); err != nil {
+				t.Fatalf("error decoding output: %s", err)
+			}
+			if docs2, err = decodeToMapSlice(tc.want); err != nil {
+				t.Fatalf("Error decoding want: %s", err)
+			}
+			if !reflect.DeepEqual(docs1, docs2) {
+				t.Fatalf("incorrect output: got %s, want %s", string(output), tc.want)
 			}
 		})
 	}
 }

+func decodeToMapSlice(data string) ([]yaml.MapSlice, error) {
+	// ensures that the order is correct
+	var docs []yaml.MapSlice
+	decoder := yaml.NewDecoder(strings.NewReader(data))
+	for {
+		var doc yaml.MapSlice
+		err := decoder.Decode(&doc)
+		if err == io.EOF {
+			break
+		}
+		if err != nil {
+			return nil, err
+		}
+		docs = append(docs, doc)
+	}
+	return docs, nil
+}
+
 func TestParseToolFile(t *testing.T) {
 	ctx, err := testutils.ContextWithNewLogger()
 	if err != nil {
@@ -1015,8 +869,7 @@ func TestParseToolFile(t *testing.T) {
 						ToolNames: []string{"example_tool"},
 					},
 				},
-				AuthServices: nil,
-				Prompts:      nil,
+				Prompts: nil,
 			},
 		},
 		{
@@ -1120,7 +973,7 @@ func TestParseToolFile(t *testing.T) {
 					},
 				},
 				Prompts: server.PromptConfigs{
-					"code_review": &custom.Config{
+					"code_review": custom.Config{
 						Name:        "code_review",
 						Description: "ask llm to analyze code quality",
 						Arguments: prompts.Arguments{
@@ -1138,12 +991,12 @@ func TestParseToolFile(t *testing.T) {
 			in: `
            kind: prompts
            name: my-prompt
-            description: A prompt template for data analysis.
-            arguments:
-                - name: country
-                  description: The country to analyze.
-            messages:
-                - content: Analyze the data for {{.country}}.
+			description: A prompt template for data analysis.
+			arguments:
+				- name: country
+					description: The country to analyze.
+			messages:
+				- content: Analyze the data for {{.country}}.
            `,
 			wantToolsFile: ToolsFile{
 				Sources:      nil,
@@ -1213,17 +1066,17 @@ func TestParseToolFileWithAuth(t *testing.T) {
 			database: my_db
 			user: my_user
 			password: my_pass
---
+			---
 			kind: authServices
 			name: my-google-service
 			type: google
 			clientId: my-client-id
---
+			---
 			kind: authServices
 			name: other-google-service
 			type: google
 			clientId: other-client-id
---
+			---
 			kind: tools
 			name: example_tool
 			type: postgres-sql
@@ -1249,7 +1102,7 @@ func TestParseToolFileWithAuth(t *testing.T) {
 						field: email
 					- name: other-google-service
 						field: other_email
---
+			---
 			kind: toolsets
 			name: example_toolset
 			tools:
@@ -1417,17 +1270,17 @@ func TestParseToolFileWithAuth(t *testing.T) {
 			database: my_db
 			user: my_user
 			password: my_pass
---
+			---
 			kind: authServices
 			name: my-google-service
 			type: google
 			clientId: my-client-id
---
+			---
 			kind: authServices
 			name: other-google-service
 			type: google
 			clientId: other-client-id
---
+			---
 			kind: tools
 			name: example_tool
 			type: postgres-sql
@@ -1455,7 +1308,7 @@ func TestParseToolFileWithAuth(t *testing.T) {
 						field: email
 					- name: other-google-service
 						field: other_email
---
+			---
 			kind: toolsets
 			name: example_toolset
 			tools:
@@ -1714,17 +1567,17 @@ func TestEnvVarReplacement(t *testing.T) {
 				Authorization: ${TestHeader}
 			queryParams:
 				api-key: ${API_KEY}
---
+			---
 			kind: authServices
 			name: my-google-service
 			type: google
 			clientId: ${clientId}
---
+			---
 			kind: authServices
 			name: other-google-service
 			type: google
 			clientId: ${clientId2}
---
+			---
 			kind: tools
 			name: example_tool
 			type: http
@@ -1765,12 +1618,12 @@ func TestEnvVarReplacement(t *testing.T) {
 				- name: Language
 					type: string
 					description: language string
---
+			---
 			kind: toolsets
 			name: ${toolset_name}
 			tools:
 				- example_tool
---
+			---
 			kind: prompts
 			name: ${prompt_name}
 			description: A test prompt for {{.name}}.
@@ -2213,7 +2066,7 @@ func TestPrebuiltTools(t *testing.T) {
 			wantToolset: server.ToolsetConfigs{
 				"cloud_sql_postgres_admin_tools": tools.ToolsetConfig{
 					Name:      "cloud_sql_postgres_admin_tools",
-					ToolNames: []string{"create_instance", "get_instance", "list_instances", "create_database", "list_databases", "create_user", "wait_for_operation", "postgres_upgrade_precheck", "clone_instance", "create_backup", "restore_backup"},
+					ToolNames: []string{"create_instance", "get_instance", "list_instances", "create_database", "list_databases", "create_user", "wait_for_operation", "postgres_upgrade_precheck", "clone_instance", "create_backup"},
 				},
 			},
 		},
@@ -2223,7 +2076,7 @@ func TestPrebuiltTools(t *testing.T) {
 			wantToolset: server.ToolsetConfigs{
 				"cloud_sql_mysql_admin_tools": tools.ToolsetConfig{
 					Name:      "cloud_sql_mysql_admin_tools",
-					ToolNames: []string{"create_instance", "get_instance", "list_instances", "create_database", "list_databases", "create_user", "wait_for_operation", "clone_instance", "create_backup", "restore_backup"},
+					ToolNames: []string{"create_instance", "get_instance", "list_instances", "create_database", "list_databases", "create_user", "wait_for_operation", "clone_instance", "create_backup"},
 				},
 			},
 		},
@@ -2233,7 +2086,7 @@ func TestPrebuiltTools(t *testing.T) {
 			wantToolset: server.ToolsetConfigs{
 				"cloud_sql_mssql_admin_tools": tools.ToolsetConfig{
 					Name:      "cloud_sql_mssql_admin_tools",
-					ToolNames: []string{"create_instance", "get_instance", "list_instances", "create_database", "list_databases", "create_user", "wait_for_operation", "clone_instance", "create_backup", "restore_backup"},
+					ToolNames: []string{"create_instance", "get_instance", "list_instances", "create_database", "list_databases", "create_user", "wait_for_operation", "clone_instance", "create_backup"},
 				},
 			},
 		},
@@ -2748,7 +2601,6 @@ description: "Dummy"
 ---
 kind: toolsets
 name: sqlite_database_tools
-tools:
 - dummy_tool
 `
 	toolsetConflictFile := filepath.Join(t.TempDir(), "toolset_conflict.yaml")
@@ -2789,12 +2641,6 @@ authSources:
 				return nil
 			},
 		},
-		{
-			desc:      "sqlite called twice error",
-			args:      []string{"--prebuilt", "sqlite", "--prebuilt", "sqlite"},
-			wantErr:   true,
-			errString: "resource conflicts detected",
-		},
 		{
 			desc:      "tool conflict error",
 			args:      []string{"--prebuilt", "sqlite", "--tools-file", toolConflictFile},
@@ -2903,115 +2749,3 @@ func TestDefaultToolsFileBehavior(t *testing.T) {
 		})
 	}
 }
-
-func TestParameterReferenceValidation(t *testing.T) {
-	ctx, err := testutils.ContextWithNewLogger()
-	if err != nil {
-		t.Fatalf("unexpected error: %s", err)
-	}
-
-	// Base template
-	baseYaml := `
-sources:
-  dummy-source:
-    kind: http
-    baseUrl: http://example.com
-tools:
-  test-tool:
-    kind: postgres-sql
-    source: dummy-source
-    description: test tool
-    statement: SELECT 1;
-    parameters:
-%s`
-
-	tcs := []struct {
-		desc      string
-		params    string
-		wantErr   bool
-		errSubstr string
-	}{
-		{
-			desc: "valid backward reference",
-			params: `
-      - name: source_param
-        type: string
-        description: source
-      - name: copy_param
-        type: string
-        description: copy
-        valueFromParam: source_param`,
-			wantErr: false,
-		},
-		{
-			desc: "valid forward reference (out of order)",
-			params: `
-      - name: copy_param
-        type: string
-        description: copy
-        valueFromParam: source_param
-      - name: source_param
-        type: string
-        description: source`,
-			wantErr: false,
-		},
-		{
-			desc: "invalid missing reference",
-			params: `
-      - name: copy_param
-        type: string
-        description: copy
-        valueFromParam: non_existent_param`,
-			wantErr:   true,
-			errSubstr: "references '\"non_existent_param\"' in the 'valueFromParam' field",
-		},
-		{
-			desc: "invalid self reference",
-			params: `
-      - name: myself
-        type: string
-        description: self
-        valueFromParam: myself`,
-			wantErr:   true,
-			errSubstr: "parameter \"myself\" cannot copy value from itself",
-		},
-		{
-			desc: "multiple valid references",
-			params: `
-      - name: a
-        type: string
-        description: a
-      - name: b
-        type: string
-        description: b
-        valueFromParam: a
-      - name: c
-        type: string
-        description: c
-        valueFromParam: a`,
-			wantErr: false,
-		},
-	}
-
-	for _, tc := range tcs {
-		t.Run(tc.desc, func(t *testing.T) {
-			// Indent parameters to match YAML structure
-			yamlContent := fmt.Sprintf(baseYaml, tc.params)
-
-			_, err := parseToolsFile(ctx, []byte(yamlContent))
-
-			if tc.wantErr {
-				if err == nil {
-					t.Fatal("expected error, got nil")
-				}
-				if !strings.Contains(err.Error(), tc.errSubstr) {
-					t.Errorf("error %q does not contain expected substring %q", err.Error(), tc.errSubstr)
-				}
-			} else {
-				if err != nil {
-					t.Fatalf("unexpected error: %v", err)
-				}
-			}
-		})
-	}
-}
--- a/cmd/test.db
+++ b/cmd/test.db
--- a/cmd/version.txt
+++ b/cmd/version.txt
@@ -1 +1 @@
-0.26.0
+0.25.0
--- a/docs/en/getting-started/colab_quickstart.ipynb
+++ b/docs/en/getting-started/colab_quickstart.ipynb
@@ -234,7 +234,7 @@
      },
      "outputs": [],
      "source": [
-        "version = \"0.26.0\" # x-release-please-version\n",
+        "version = \"0.25.0\" # x-release-please-version\n",
        "! curl -O https://storage.googleapis.com/genai-toolbox/v{version}/linux/amd64/toolbox\n",
        "\n",
        "# Make the binary executable\n",
--- a/docs/en/getting-started/introduction/_index.md
+++ b/docs/en/getting-started/introduction/_index.md
@@ -16,12 +16,6 @@ Databases” as its initial development predated MCP, but was renamed to align
 with recently added MCP compatibility.
 {{< /notice >}}

-{{< notice note >}}
-This document has been updated to support the configuration file v2 format. To
-view documentation with configuration file v1 format, please navigate to the
-top-right menu and select versions v0.26.0 or older.
-{{< /notice >}}
-
 ## Why Toolbox?

 Toolbox helps you build Gen AI tools that let your agents access data in your
@@ -109,7 +103,7 @@ To install Toolbox as a binary on Linux (AMD64):

 ```sh
 # see releases page for other versions
-export VERSION=0.26.0
+export VERSION=0.25.0
 curl -L -o toolbox https://storage.googleapis.com/genai-toolbox/v$VERSION/linux/amd64/toolbox
 chmod +x toolbox
 ```
@@ -120,7 +114,7 @@ To install Toolbox as a binary on macOS (Apple Silicon):

 ```sh
 # see releases page for other versions
-export VERSION=0.26.0
+export VERSION=0.25.0
 curl -L -o toolbox https://storage.googleapis.com/genai-toolbox/v$VERSION/darwin/arm64/toolbox
 chmod +x toolbox
 ```
@@ -131,7 +125,7 @@ To install Toolbox as a binary on macOS (Intel):

 ```sh
 # see releases page for other versions
-export VERSION=0.26.0
+export VERSION=0.25.0
 curl -L -o toolbox https://storage.googleapis.com/genai-toolbox/v$VERSION/darwin/amd64/toolbox
 chmod +x toolbox
 ```
@@ -142,7 +136,7 @@ To install Toolbox as a binary on Windows (Command Prompt):

 ```cmd
 :: see releases page for other versions
-set VERSION=0.26.0
+set VERSION=0.25.0
 curl -o toolbox.exe "https://storage.googleapis.com/genai-toolbox/v%VERSION%/windows/amd64/toolbox.exe"
 ```

@@ -152,7 +146,7 @@ To install Toolbox as a binary on Windows (PowerShell):

 ```powershell
 # see releases page for other versions
-$VERSION = "0.26.0"
+$VERSION = "0.25.0"
 curl.exe -o toolbox.exe "https://storage.googleapis.com/genai-toolbox/v$VERSION/windows/amd64/toolbox.exe"
 ```

@@ -164,7 +158,7 @@ You can also install Toolbox as a container:

 ```sh
 # see releases page for other versions
-export VERSION=0.26.0
+export VERSION=0.25.0
 docker pull us-central1-docker.pkg.dev/database-toolbox/toolbox/toolbox:$VERSION
 ```

@@ -183,7 +177,7 @@ To install from source, ensure you have the latest version of
 [Go installed](https://go.dev/doc/install), and then run the following command:

 ```sh
-go install github.com/googleapis/genai-toolbox@v0.26.0
+go install github.com/googleapis/genai-toolbox@v0.25.0
 ```

 {{% /tab %}}
--- a/docs/en/getting-started/mcp_quickstart/_index.md
+++ b/docs/en/getting-started/mcp_quickstart/_index.md
@@ -105,7 +105,7 @@ In this section, we will download Toolbox, configure our tools in a
    <!-- {x-release-please-start-version} -->
    ```bash
    export OS="linux/amd64" # one of linux/amd64, darwin/arm64, darwin/amd64, or windows/amd64
-    curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/$OS/toolbox
+    curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/$OS/toolbox
    ```
    <!-- {x-release-please-end} -->

--- a/docs/en/getting-started/quickstart/shared/configure_toolbox.md
+++ b/docs/en/getting-started/quickstart/shared/configure_toolbox.md
@@ -13,7 +13,7 @@ In this section, we will download Toolbox, configure our tools in a
    <!-- {x-release-please-start-version} -->
    ```bash
    export OS="linux/amd64" # one of linux/amd64, darwin/arm64, darwin/amd64, or windows/amd64
-    curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/$OS/toolbox
+    curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/$OS/toolbox
    ```
    <!-- {x-release-please-end} -->

--- a/docs/en/how-to/connect-ide/cloud_sql_mssql_admin_mcp.md
+++ b/docs/en/how-to/connect-ide/cloud_sql_mssql_admin_mcp.md
@@ -54,7 +54,6 @@ instance, database and users:
        * `create_instance`
        * `create_user`
        * `clone_instance`
-        * `restore_backup`

 ## Install MCP Toolbox

@@ -302,7 +301,6 @@ instances and interacting with your database:
 * **wait_for_operation**: Waits for a Cloud SQL operation to complete.
 * **clone_instance**: Creates a clone of an existing Cloud SQL for SQL Server instance.
 * **create_backup**: Creates a backup on a Cloud SQL instance.
-* **restore_backup**: Restores a backup of a Cloud SQL instance.

 {{< notice note >}}
 Prebuilt tools are pre-1.0, so expect some tool changes between versions. LLMs
--- a/docs/en/how-to/connect-ide/cloud_sql_mysql_admin_mcp.md
+++ b/docs/en/how-to/connect-ide/cloud_sql_mysql_admin_mcp.md
@@ -54,7 +54,6 @@ database and users:
        * `create_instance`
        * `create_user`
        * `clone_instance`
-        * `restore_backup`

 ## Install MCP Toolbox

@@ -302,7 +301,6 @@ instances and interacting with your database:
 * **wait_for_operation**: Waits for a Cloud SQL operation to complete.
 * **clone_instance**: Creates a clone of an existing Cloud SQL for MySQL instance.
 * **create_backup**: Creates a backup on a Cloud SQL instance.
-* **restore_backup**: Restores a backup of a Cloud SQL instance.

 {{< notice note >}}
 Prebuilt tools are pre-1.0, so expect some tool changes between versions. LLMs
--- a/docs/en/how-to/connect-ide/cloud_sql_pg_admin_mcp.md
+++ b/docs/en/how-to/connect-ide/cloud_sql_pg_admin_mcp.md
@@ -54,7 +54,6 @@ instance, database and users:
        * `create_instance`
        * `create_user`
        * `clone_instance`
-        * `restore_backup`

 ## Install MCP Toolbox

@@ -302,7 +301,6 @@ instances and interacting with your database:
 * **wait_for_operation**: Waits for a Cloud SQL operation to complete.
 * **clone_instance**: Creates a clone of an existing Cloud SQL for PostgreSQL instance.
 * **create_backup**: Creates a backup on a Cloud SQL instance.
-* **restore_backup**: Restores a backup of a Cloud SQL instance.

 {{< notice note >}}
 Prebuilt tools are pre-1.0, so expect some tool changes between versions. LLMs
--- a/docs/en/how-to/connect-ide/looker_mcp.md
+++ b/docs/en/how-to/connect-ide/looker_mcp.md
@@ -100,19 +100,19 @@ After you install Looker in the MCP Store, resources and tools from the server a

 {{< tabpane persist=header >}}
 {{< tab header="linux/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/linux/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/linux/amd64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/arm64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/arm64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/arm64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/amd64/toolbox
 {{< /tab >}}

 {{< tab header="windows/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/windows/amd64/toolbox.exe
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/windows/amd64/toolbox.exe
 {{< /tab >}}
 {{< /tabpane >}}
    <!-- {x-release-please-end} -->
--- a/docs/en/how-to/connect-ide/mssql_mcp.md
+++ b/docs/en/how-to/connect-ide/mssql_mcp.md
@@ -45,19 +45,19 @@ instance:
   <!-- {x-release-please-start-version} -->
   {{< tabpane persist=header >}}
 {{< tab header="linux/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/linux/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/linux/amd64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/arm64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/arm64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/arm64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/amd64/toolbox
 {{< /tab >}}

 {{< tab header="windows/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/windows/amd64/toolbox.exe
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/windows/amd64/toolbox.exe
 {{< /tab >}}
 {{< /tabpane >}}
    <!-- {x-release-please-end} -->
--- a/docs/en/how-to/connect-ide/mysql_mcp.md
+++ b/docs/en/how-to/connect-ide/mysql_mcp.md
@@ -43,19 +43,19 @@ expose your developer assistant tools to a MySQL instance:
   <!-- {x-release-please-start-version} -->
   {{< tabpane persist=header >}}
 {{< tab header="linux/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/linux/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/linux/amd64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/arm64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/arm64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/arm64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/amd64/toolbox
 {{< /tab >}}

 {{< tab header="windows/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/windows/amd64/toolbox.exe
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/windows/amd64/toolbox.exe
 {{< /tab >}}
 {{< /tabpane >}}
    <!-- {x-release-please-end} -->
--- a/docs/en/how-to/connect-ide/neo4j_mcp.md
+++ b/docs/en/how-to/connect-ide/neo4j_mcp.md
@@ -44,19 +44,19 @@ expose your developer assistant tools to a Neo4j instance:
   <!-- {x-release-please-start-version} -->
   {{< tabpane persist=header >}}
 {{< tab header="linux/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/linux/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/linux/amd64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/arm64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/arm64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/arm64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/amd64/toolbox
 {{< /tab >}}

 {{< tab header="windows/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/windows/amd64/toolbox.exe
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/windows/amd64/toolbox.exe
 {{< /tab >}}
 {{< /tabpane >}}
    <!-- {x-release-please-end} -->
--- a/docs/en/how-to/connect-ide/postgres_mcp.md
+++ b/docs/en/how-to/connect-ide/postgres_mcp.md
@@ -56,19 +56,19 @@ Omni](https://cloud.google.com/alloydb/omni/current/docs/overview).
   <!-- {x-release-please-start-version} -->
   {{< tabpane persist=header >}}
 {{< tab header="linux/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/linux/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/linux/amd64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/arm64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/arm64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/arm64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/amd64/toolbox
 {{< /tab >}}

 {{< tab header="windows/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/windows/amd64/toolbox.exe
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/windows/amd64/toolbox.exe
 {{< /tab >}}
 {{< /tabpane >}}
    <!-- {x-release-please-end} -->
--- a/docs/en/how-to/connect-ide/sqlite_mcp.md
+++ b/docs/en/how-to/connect-ide/sqlite_mcp.md
@@ -43,19 +43,19 @@ to expose your developer assistant tools to a SQLite instance:
   <!-- {x-release-please-start-version} -->
   {{< tabpane persist=header >}}
 {{< tab header="linux/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/linux/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/linux/amd64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/arm64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/arm64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/arm64/toolbox
 {{< /tab >}}

 {{< tab header="darwin/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/darwin/amd64/toolbox
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/darwin/amd64/toolbox
 {{< /tab >}}

 {{< tab header="windows/amd64" lang="bash" >}}
-curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/windows/amd64/toolbox.exe
+curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/windows/amd64/toolbox.exe
 {{< /tab >}}
 {{< /tabpane >}}
    <!-- {x-release-please-end} -->
--- a/docs/en/how-to/connect_via_mcp.md
+++ b/docs/en/how-to/connect_via_mcp.md
@@ -20,7 +20,6 @@ The native SDKs can be combined with MCP clients in many cases.

 Toolbox currently supports the following versions of MCP specification:

-* [2025-11-25](https://modelcontextprotocol.io/specification/2025-11-25)
 * [2025-06-18](https://modelcontextprotocol.io/specification/2025-06-18)
 * [2025-03-26](https://modelcontextprotocol.io/specification/2025-03-26)
 * [2024-11-05](https://modelcontextprotocol.io/specification/2024-11-05)
--- a/docs/en/how-to/deploy_toolbox.md
+++ b/docs/en/how-to/deploy_toolbox.md
@@ -207,7 +207,6 @@ You can connect to Toolbox Cloud Run instances directly through the SDK.
 {{< tab header="Python" lang="python" >}}
 import asyncio
 from toolbox_core import ToolboxClient, auth_methods
-from toolbox_core.protocol import Protocol

 # Replace with the Cloud Run service URL generated in the previous step
 URL = "https://cloud-run-url.app"
@@ -218,7 +217,6 @@ async def main():
  async with ToolboxClient(
      URL,
      client_headers={"Authorization": auth_token_provider},
-      protocol=Protocol.TOOLBOX,
  ) as toolbox:
    toolset = await toolbox.load_toolset()
    # ...
@@ -283,5 +281,3 @@ contain the specific error message needed to diagnose the problem.
  Manager, it means the Toolbox service account is missing permissions.
  - Ensure the `toolbox-identity` service account has the **Secret Manager
      Secret Accessor** (`roles/secretmanager.secretAccessor`) IAM role.
-
- **Cloud Run Connections via IAP:** Currently we do not support Cloud Run connections via [IAP](https://docs.cloud.google.com/iap/docs/concepts-overview). Please disable IAP if you are using it.
--- a/docs/en/reference/cli.md
+++ b/docs/en/reference/cli.md
@@ -16,7 +16,7 @@ description: >
 |              | `--log-level`              | Specify the minimum level logged. Allowed: 'DEBUG', 'INFO', 'WARN', 'ERROR'.                                                                                                     | `info`      |
 |              | `--logging-format`         | Specify logging format to use. Allowed: 'standard' or 'JSON'.                                                                                                                    | `standard`  |
 | `-p`         | `--port`                   | Port the server will listen on.                                                                                                                                                  | `5000`      |
-|              | `--prebuilt`               | Use one or more prebuilt tool configuration by source type. See [Prebuilt Tools Reference](prebuilt-tools.md) for allowed values.                                                          |             |
+|              | `--prebuilt`               | Use a prebuilt tool configuration by source type. See [Prebuilt Tools Reference](prebuilt-tools.md) for allowed values.                                                          |             |
 |              | `--stdio`                  | Listens via MCP STDIO instead of acting as a remote HTTP server.                                                                                                                 |             |
 |              | `--telemetry-gcp`          | Enable exporting directly to Google Cloud Monitoring.                                                                                                                            |             |
 |              | `--telemetry-otlp`         | Enable exporting using OpenTelemetry Protocol (OTLP) to the specified endpoint (e.g. 'http://127.0.0.1:4318')                                                                    |             |
@@ -27,7 +27,6 @@ description: >
 |              | `--ui`                     | Launches the Toolbox UI web server.                                                                                                                                              |             |
 |              | `--allowed-origins`        | Specifies a list of origins permitted to access this server for CORs access.                                                                                                     | `*`         |
 |              | `--allowed-hosts`          | Specifies a list of hosts permitted to access this server to prevent DNS rebinding attacks.                                                                                      | `*`         |
-|              | `--user-agent-extra`       | Appends additional metadata to the User-Agent.                                                                                                                                   |             |
 | `-v`         | `--version`                | version for toolbox                                                                                                                                                              |             |

 ## Examples
@@ -51,11 +50,6 @@ description: >

 # Server with prebuilt + custom tools configurations
 ./toolbox --tools-file tools.yaml --prebuilt alloydb-postgres
-
-# Server with multiple prebuilt tools configurations
-./toolbox --prebuilt alloydb-postgres,alloydb-postgres-admin
-# OR
-./toolbox --prebuilt alloydb-postgres --prebuilt alloydb-postgres-admin
 ```

 ### Tool Configuration Sources
@@ -76,7 +70,7 @@ The CLI supports multiple mutually exclusive ways to specify tool configurations

 **Prebuilt Configurations:**

- `--prebuilt`: Use one or more predefined configurations for specific database types (e.g.,
+- `--prebuilt`: Use predefined configurations for specific database types (e.g.,
  'bigquery', 'postgres', 'spanner'). See [Prebuilt Tools
  Reference](prebuilt-tools.md) for allowed values.

--- a/docs/en/reference/prebuilt-tools.md
+++ b/docs/en/reference/prebuilt-tools.md
@@ -16,9 +16,6 @@ details on how to connect your AI tools (IDEs) to databases via Toolbox and MCP.
 {{< notice tip >}}
 You can now use `--prebuilt` along `--tools-file`, `--tools-files`, or
 `--tools-folder` to combine prebuilt configs with custom tools.
-
-You can also combine multiple prebuilt configs.
-
 See [Usage Examples](../reference/cli.md#examples).
 {{< /notice >}}

@@ -197,7 +194,6 @@ See [Usage Examples](../reference/cli.md#examples).
        * `create_instance`
        * `create_user`
        * `clone_instance`
-        * `restore_backup`

 *   **Tools:**
    *   `create_instance`: Creates a new Cloud SQL for MySQL instance.
@@ -209,7 +205,6 @@ See [Usage Examples](../reference/cli.md#examples).
    *   `wait_for_operation`: Waits for a Cloud SQL operation to complete.
    *   `clone_instance`: Creates a clone for an existing Cloud SQL for MySQL instance.
    *   `create_backup`: Creates a backup on a Cloud SQL instance.
-    *   `restore_backup`: Restores a backup of a Cloud SQL instance.

 ## Cloud SQL for PostgreSQL

@@ -289,7 +284,6 @@ See [Usage Examples](../reference/cli.md#examples).
        * `create_instance`
        * `create_user`
        * `clone_instance`
-        * `restore_backup`
 *   **Tools:**
    *   `create_instance`: Creates a new Cloud SQL for PostgreSQL instance.
    *   `get_instance`: Gets information about a Cloud SQL instance.
@@ -300,7 +294,6 @@ See [Usage Examples](../reference/cli.md#examples).
    *   `wait_for_operation`: Waits for a Cloud SQL operation to complete.
    *   `clone_instance`: Creates a clone for an existing Cloud SQL for PostgreSQL instance.
    *   `create_backup`: Creates a backup on a Cloud SQL instance.
-    *   `restore_backup`: Restores a backup of a Cloud SQL instance.

 ## Cloud SQL for SQL Server

@@ -354,7 +347,6 @@ See [Usage Examples](../reference/cli.md#examples).
        * `create_instance`
        * `create_user`
        * `clone_instance`
-        * `restore_backup`
 *   **Tools:**
    *   `create_instance`: Creates a new Cloud SQL for SQL Server instance.
    *   `get_instance`: Gets information about a Cloud SQL instance.
@@ -365,7 +357,6 @@ See [Usage Examples](../reference/cli.md#examples).
    *   `wait_for_operation`: Waits for a Cloud SQL operation to complete.
    *   `clone_instance`: Creates a clone for an existing Cloud SQL for SQL Server instance.
    *   `create_backup`: Creates a backup on a Cloud SQL instance.
-    *   `restore_backup`: Restores a backup of a Cloud SQL instance.

 ## Dataplex

--- a/docs/en/resources/embeddingModels/_index.md
+++ b/docs/en/resources/embeddingModels/_index.md
@@ -3,14 +3,13 @@ title: "EmbeddingModels"
 type: docs
 weight: 2
 description: >
-  EmbeddingModels represent services that transform text into vector embeddings
-  for semantic search.
+  EmbeddingModels represent services that transform text into vector embeddings for semantic search.
 ---

 EmbeddingModels represent services that generate vector representations of text
-data. In the MCP Toolbox, these models enable **Semantic Queries**, allowing
-[Tools](../tools/) to automatically convert human-readable text into numerical
-vectors before using them in a query.
+data. In the MCP Toolbox, these models enable **Semantic Queries**,
+allowing [Tools](../tools/) to automatically convert human-readable text into
+numerical vectors before using them in a query.

 This is primarily used in two scenarios:

@@ -20,33 +19,14 @@ This is primarily used in two scenarios:
 - **Semantic Search**: Converting a natural language query into a vector to
  perform similarity searches.

-## Hidden Parameter Duplication (valueFromParam)
-
-When building tools for vector ingestion, you often need the same input string
-twice:
-
-1. To store the original text in a TEXT column.
-1. To generate the vector embedding for a VECTOR column.
-
-Requesting an Agent (LLM) to output the exact same string twice is inefficient
-and error-prone. The `valueFromParam` field solves this by allowing a parameter
-to inherit its value from another parameter in the same tool.
-
-### Key Behaviors
-
-1. Hidden from Manifest: Parameters with valueFromParam set are excluded from
-   the tool definition sent to the Agent. The Agent does not know this parameter
-   exists.
-1. Auto-Filled: When the tool is executed, the Toolbox automatically copies the
-   value from the referenced parameter before processing embeddings.
-
 ## Example

 The following configuration defines an embedding model and applies it to
 specific tool parameters.

-{{< notice tip >}} Use environment variable replacement with the format
-${ENV_NAME} instead of hardcoding your API keys into the configuration file.
+{{< notice tip >}}
+Use environment variable replacement with the format ${ENV_NAME}
+instead of hardcoding your API keys into the configuration file.
 {{< /notice >}}

 ### Step 1 - Define an Embedding Model
@@ -55,7 +35,7 @@ Define an embedding model in the `embeddingModels` section:

 ```yaml
 kind: embeddingModels
-name: gemini-model # Name of the embedding model
+name: gemini-model: # Name of the embedding model
 type: gemini
 model: gemini-embedding-001
 apiKey: ${GOOGLE_API_KEY}
@@ -65,7 +45,8 @@ dimension: 768
 ### Step 2 - Embed Tool Parameters

 Use the defined embedding model, embed your query parameters using the
-`embeddedBy` field. Only string-typed parameters can be embedded:
+`embeddedBy` field. Only string-typed
+parameters can be embedded:

 ```yaml
 # Vector ingestion tool
@@ -79,13 +60,10 @@ statement: |
 parameters:
  - name: content
    type: string
-    description: The raw text content to be stored in the database.
  - name: vector_string
    type: string
-    # This parameter is hidden from the LLM.
-    # It automatically copies the value from 'content' and embeds it.
-    valueFromParam: content
-    embeddedBy: gemini-model
+    description: The text to be vectorized and stored.
+    embeddedBy: gemini-model # refers to the name of a defined embedding model
 ---
 # Semantic search tool
 kind: tools
--- a/docs/en/resources/prompts/_index.md
+++ b/docs/en/resources/prompts/_index.md
@@ -20,10 +20,10 @@ kind: prompts
 name: code_review
 description: "Asks the LLM to analyze code quality and suggest improvements."
 messages:
-  - content: "Please review the following code for quality, correctness, and potential improvements: \n\n{{.code}}"
-arguments:
-  - name: "code"
-    description: "The code to review"
+   - content: "Please review the following code for quality, correctness, and potential improvements: \n\n{{.code}}"
+ arguments:
+   - name: "code"
+     description: "The code to review"
 ```

 ## Prompt Schema
--- a/docs/en/resources/sources/alloydb-admin.md
+++ b/docs/en/resources/sources/alloydb-admin.md
@@ -27,7 +27,7 @@ Authentication can be handled in two ways:
 ```yaml
 kind: sources
 name: my-alloydb-admin
-type: alloydb-admin
+type: alloy-admin
 ---
 kind: sources
 name: my-oauth-alloydb-admin
--- a/docs/en/resources/sources/dgraph.md
+++ b/docs/en/resources/sources/dgraph.md
@@ -7,17 +7,6 @@ description: >

 ---

-{{< notice note >}}
-**⚠️ Best Effort Maintenance**
-
-This integration is maintained on a best-effort basis by the project
-team/community. While we strive to address issues and provide workarounds when
-resources are available, there are no guaranteed response times or code fixes.
-
-The automated integration tests for this module are currently non-functional or
-failing.
-{{< /notice >}}
-
 ## About

 [Dgraph][dgraph-docs] is an open-source graph database. It is designed for
--- a/docs/en/resources/tools/cloudgda/cloud-gda-query.md
+++ b/docs/en/resources/tools/cloudgda/cloud-gda-query.md
@@ -12,9 +12,6 @@ aliases:

 The `cloud-gemini-data-analytics-query` tool allows you to send natural language questions to the Gemini Data Analytics API and receive structured responses containing SQL queries, natural language answers, and explanations. For details on defining data agent context for database data sources, see the official [documentation](https://docs.cloud.google.com/gemini/docs/conversational-analytics-api/data-agent-authored-context-databases).

-> [!NOTE]
-> Only `alloydb`, `spannerReference`, and `cloudSqlReference` are supported as [datasource references](https://clouddocs.devsite.corp.google.com/gemini/docs/conversational-analytics-api/reference/rest/v1beta/projects.locations.dataAgents#DatasourceReferences).
-
 ## Example

 ```yaml
@@ -44,13 +41,13 @@ generationOptions:

 ### Usage Flow

-When using this tool, a `query` parameter containing a natural language query is provided to the tool (typically by an agent). The tool then interacts with the Gemini Data Analytics API using the context defined in your configuration.
+When using this tool, a `prompt` parameter containing a natural language query is provided to the tool (typically by an agent). The tool then interacts with the Gemini Data Analytics API using the context defined in your configuration.

 The structure of the response depends on the `generationOptions` configured in your tool definition (e.g., enabling `generateQueryResult` will include the SQL query results).

 See [Data Analytics API REST documentation](https://clouddocs.devsite.corp.google.com/gemini/docs/conversational-analytics-api/reference/rest/v1alpha/projects.locations/queryData?rep_location=global) for details.

-**Example Input Query:**
+**Example Input Prompt:**

 ```text
 How many accounts who have region in Prague are eligible for loans? A3 contains the data of region.
--- a/docs/en/resources/tools/cloudsql/cloudsqlrestorebackup.md
+++ b/docs/en/resources/tools/cloudsql/cloudsqlrestorebackup.md
@@ -1,53 +0,0 @@
---
-title: cloud-sql-restore-backup
-type: docs
-weight: 10
-description: "Restores a backup of a Cloud SQL instance."
---
-
-The `cloud-sql-restore-backup` tool restores a backup on a Cloud SQL instance using the Cloud SQL Admin API.
-
-{{< notice info dd>}}
-This tool uses a `source` of kind `cloud-sql-admin`.
-{{< /notice >}}
-
-## Examples
-
-Basic backup restore
-
-```yaml
-tools:
-  backup-restore-basic:
-    kind: cloud-sql-restore-backup
-    source: cloud-sql-admin-source
-    description: "Restores a backup onto the given Cloud SQL instance."
-```
-
-## Reference
-
-### Tool Configuration
-| **field**      | **type** | **required** | **description**                                  |
-| -------------- | :------: | :----------: | ------------------------------------------------ |
-| kind           | string   | true         | Must be "cloud-sql-restore-backup".              |
-| source         | string   | true         | The name of the `cloud-sql-admin` source to use. |
-| description    | string   | false        | A description of the tool.                       |
-
-### Tool Inputs
-
-| **parameter**     | **type** | **required** | **description**                                                              |
-| ------------------| :------: | :----------: | -----------------------------------------------------------------------------|
-| target_project    | string   | true         | The project ID of the instance to restore the backup onto.                   |
-| target_instance   | string   | true         | The instance to restore the backup onto. Does not include the project ID.    |
-| backup_id         | string   | true         | The identifier of the backup being restored.                                 |
-| source_project    | string   | false        | (Optional) The project ID of the instance that the backup belongs to.        |
-| source_instance   | string   | false        | (Optional) Cloud SQL instance ID of the instance that the backup belongs to. |
-
-## Usage Notes
-
- The `backup_id` field can be a BackupRun ID (which will be an int64), backup name, or BackupDR backup name.
- If the `backup_id` field contains a BackupRun ID (i.e. an int64), the optional fields `source_project` and `source_instance` must also be provided.
-
-## See Also
- [Cloud SQL Admin API documentation](https://cloud.google.com/sql/docs/mysql/admin-api)
- [Toolbox Cloud SQL tools documentation](../cloudsql)
- [Cloud SQL Restore API documentation](https://cloud.google.com/sql/docs/mysql/backup-recovery/restoring)
--- a/docs/en/resources/tools/dgraph/dgraph-dql.md
+++ b/docs/en/resources/tools/dgraph/dgraph-dql.md
@@ -9,17 +9,6 @@ aliases:
 - /resources/tools/dgraph-dql
 ---

-{{< notice note >}}
-**⚠️ Best Effort Maintenance**
-
-This integration is maintained on a best-effort basis by the project
-team/community. While we strive to address issues and provide workarounds when
-resources are available, there are no guaranteed response times or code fixes.
-
-The automated integration tests for this module are currently non-functional or
-failing.
-{{< /notice >}}
-
 ## About

 A `dgraph-dql` tool executes a pre-defined DQL statement against a Dgraph
--- a/docs/en/resources/tools/firestore/firestore-query-collection.md
+++ b/docs/en/resources/tools/firestore/firestore-query-collection.md
@@ -18,7 +18,7 @@ with filters, ordering, and limit capabilities.
 To use this tool, you need to configure it in your YAML configuration file:

 ```yaml
-kind: sources
+kind: source
 name: my-firestore
 type: firestore
 project: my-gcp-project
--- a/docs/en/resources/tools/redis/redis.md
+++ b/docs/en/resources/tools/redis/redis.md
@@ -30,10 +30,6 @@ following config for example:
    - name: userNames
      type: array
      description: The user names to be set.  
-      items:
-          name: userName # the item name doesn't matter but it has to exist
-          type: string 
-          description: username
 ```

 If the input is an array of strings `["Alice", "Sid", "Bob"]`,  The final command
--- a/docs/en/samples/alloydb/ai-nl/alloydb_ai_nl.ipynb
+++ b/docs/en/samples/alloydb/ai-nl/alloydb_ai_nl.ipynb
@@ -771,7 +771,7 @@
      },
      "outputs": [],
      "source": [
-        "version = \"0.26.0\" # x-release-please-version\n",
+        "version = \"0.25.0\" # x-release-please-version\n",
        "! curl -L -o /content/toolbox https://storage.googleapis.com/genai-toolbox/v{version}/linux/amd64/toolbox\n",
        "\n",
        "# Make the binary executable\n",
--- a/docs/en/samples/alloydb/mcp_quickstart.md
+++ b/docs/en/samples/alloydb/mcp_quickstart.md
@@ -123,7 +123,7 @@ In this section, we will download and install the Toolbox binary.
    <!-- {x-release-please-start-version} -->
    ```bash
    export OS="linux/amd64" # one of linux/amd64, darwin/arm64, darwin/amd64, or windows/amd64
-    export VERSION="0.26.0"
+    export VERSION="0.25.0"
    curl -O https://storage.googleapis.com/genai-toolbox/v$VERSION/$OS/toolbox
    ```
    <!-- {x-release-please-end} -->
--- a/docs/en/samples/bigquery/colab_quickstart_bigquery.ipynb
+++ b/docs/en/samples/bigquery/colab_quickstart_bigquery.ipynb
@@ -220,7 +220,7 @@
      },
      "outputs": [],
      "source": [
-        "version = \"0.26.0\" # x-release-please-version\n",
+        "version = \"0.25.0\" # x-release-please-version\n",
        "! curl -O https://storage.googleapis.com/genai-toolbox/v{version}/linux/amd64/toolbox\n",
        "\n",
        "# Make the binary executable\n",
--- a/docs/en/samples/bigquery/local_quickstart.md
+++ b/docs/en/samples/bigquery/local_quickstart.md
@@ -179,7 +179,7 @@ to use BigQuery, and then run the Toolbox server.
    <!-- {x-release-please-start-version} -->
    ```bash
    export OS="linux/amd64" # one of linux/amd64, darwin/arm64, darwin/amd64, or windows/amd64
-    curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/$OS/toolbox
+    curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/$OS/toolbox
    ```
    <!-- {x-release-please-end} -->

--- a/docs/en/samples/bigquery/mcp_quickstart/_index.md
+++ b/docs/en/samples/bigquery/mcp_quickstart/_index.md
@@ -98,7 +98,7 @@ In this section, we will download Toolbox, configure our tools in a
    <!-- {x-release-please-start-version} -->
    ```bash
    export OS="linux/amd64" # one of linux/amd64, darwin/arm64, darwin/amd64, or windows/amd64
-    curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/$OS/toolbox
+    curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/$OS/toolbox
    ```
    <!-- {x-release-please-end} -->

--- a/docs/en/samples/looker/looker_gemini.md
+++ b/docs/en/samples/looker/looker_gemini.md
@@ -34,7 +34,7 @@ In this section, we will download Toolbox and run the Toolbox server.
    <!-- {x-release-please-start-version} -->
    ```bash
    export OS="linux/amd64" # one of linux/amd64, darwin/arm64, darwin/amd64, or windows/amd64
-    curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/$OS/toolbox
+    curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/$OS/toolbox
    ```
    <!-- {x-release-please-end} -->

--- a/docs/en/samples/looker/looker_gemini_oauth/_index.md
+++ b/docs/en/samples/looker/looker_gemini_oauth/_index.md
@@ -48,7 +48,7 @@ In this section, we will download Toolbox and run the Toolbox server.
    <!-- {x-release-please-start-version} -->
    ```bash
    export OS="linux/amd64" # one of linux/amd64, darwin/arm64, darwin/amd64, or windows/amd64
-    curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/$OS/toolbox
+    curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/$OS/toolbox
    ```
    <!-- {x-release-please-end} -->

--- a/docs/en/samples/looker/looker_mcp_inspector/_index.md
+++ b/docs/en/samples/looker/looker_mcp_inspector/_index.md
@@ -34,7 +34,7 @@ In this section, we will download Toolbox and run the Toolbox server.
    <!-- {x-release-please-start-version} -->
    ```bash
    export OS="linux/amd64" # one of linux/amd64, darwin/arm64, darwin/amd64, or windows/amd64
-    curl -O https://storage.googleapis.com/genai-toolbox/v0.26.0/$OS/toolbox
+    curl -O https://storage.googleapis.com/genai-toolbox/v0.25.0/$OS/toolbox
    ```
    <!-- {x-release-please-end} -->

--- a/gemini-extension.json
+++ b/gemini-extension.json
@@ -1,6 +1,6 @@
 {
  "name": "mcp-toolbox-for-databases",
-  "version": "0.26.0",
+  "version": "0.25.0",
  "description": "MCP Toolbox for Databases is an open-source MCP server for more than 30 different datasources.",
  "contextFileName": "MCP-TOOLBOX-EXTENSION.md"
 }
--- a/go.mod
+++ b/go.mod
@@ -38,7 +38,7 @@ require (
 	github.com/google/uuid v1.6.0
 	github.com/jackc/pgx/v5 v5.7.6
 	github.com/jmoiron/sqlx v1.4.0
-	github.com/looker-open-source/sdk-codegen/go v0.25.22
+	github.com/looker-open-source/sdk-codegen/go v0.25.21
 	github.com/microsoft/go-mssqldb v1.9.3
 	github.com/nakagami/firebirdsql v0.9.15
 	github.com/neo4j/neo4j-go-driver/v5 v5.28.4
@@ -63,7 +63,6 @@ require (
 	google.golang.org/api v0.256.0
 	google.golang.org/genai v1.37.0
 	google.golang.org/genproto v0.0.0-20251022142026-3a174f9686a8
-	google.golang.org/grpc v1.76.0
 	google.golang.org/protobuf v1.36.10
 	modernc.org/sqlite v1.40.0
 )
@@ -230,6 +229,7 @@ require (
 	golang.org/x/xerrors v0.0.0-20240903120638-7835f813f4da // indirect
 	google.golang.org/genproto/googleapis/api v0.0.0-20251111163417-95abcf5c77ba // indirect
 	google.golang.org/genproto/googleapis/rpc v0.0.0-20251103181224-f26f9409b101 // indirect
+	google.golang.org/grpc v1.76.0 // indirect
 	gopkg.in/inf.v0 v0.9.1 // indirect
 	gopkg.in/ini.v1 v1.67.0 // indirect
 	modernc.org/libc v1.66.10 // indirect
--- a/go.sum
+++ b/go.sum
@@ -1172,8 +1172,8 @@ github.com/leodido/go-urn v1.4.0 h1:WT9HwE9SGECu3lg4d/dIA+jxlljEa1/ffXKmRjqdmIQ=
 github.com/leodido/go-urn v1.4.0/go.mod h1:bvxc+MVxLKB4z00jd1z+Dvzr47oO32F/QSNjSBOlFxI=
 github.com/lib/pq v1.10.9 h1:YXG7RB+JIjhP29X+OtkiDnYaXQwpS4JEWq7dtCCRUEw=
 github.com/lib/pq v1.10.9/go.mod h1:AlVN5x4E4T544tWzH6hKfbfQvm3HdbOxrmggDNAPY9o=
-github.com/looker-open-source/sdk-codegen/go v0.25.22 h1:DGYt1v2R2uE/m71sWAvgxsJnDLM9B7C40N5/CTDlE2A=
-github.com/looker-open-source/sdk-codegen/go v0.25.22/go.mod h1:Br1ntSiruDJ/4nYNjpYyWyCbqJ7+GQceWbIgn0hYims=
+github.com/looker-open-source/sdk-codegen/go v0.25.21 h1:nlZ1nz22SKluBNkzplrMHBPEVgJO3zVLF6aAws1rrRA=
+github.com/looker-open-source/sdk-codegen/go v0.25.21/go.mod h1:Br1ntSiruDJ/4nYNjpYyWyCbqJ7+GQceWbIgn0hYims=
 github.com/lyft/protoc-gen-star v0.6.0/go.mod h1:TGAoBVkt8w7MPG72TrKIu85MIdXwDuzJYeZuUPFPNwA=
 github.com/lyft/protoc-gen-star v0.6.1/go.mod h1:TGAoBVkt8w7MPG72TrKIu85MIdXwDuzJYeZuUPFPNwA=
 github.com/lyft/protoc-gen-star/v2 v2.0.1/go.mod h1:RcCdONR2ScXaYnQC5tUzxzlpA3WVYF7/opLeUgcQs/o=
--- a/internal/prebuiltconfigs/tools/cloud-sql-mssql-admin.yaml
+++ b/internal/prebuiltconfigs/tools/cloud-sql-mssql-admin.yaml
@@ -46,9 +46,6 @@ tools:
  create_backup:
    kind: cloud-sql-create-backup
    source: cloud-sql-admin-source
-  restore_backup:
-    kind: cloud-sql-restore-backup
-    source: cloud-sql-admin-source

 toolsets:
  cloud_sql_mssql_admin_tools:
@@ -61,4 +58,3 @@ toolsets:
    - wait_for_operation
    - clone_instance
    - create_backup
-    - restore_backup
--- a/internal/prebuiltconfigs/tools/cloud-sql-mysql-admin.yaml
+++ b/internal/prebuiltconfigs/tools/cloud-sql-mysql-admin.yaml
@@ -46,9 +46,6 @@ tools:
  create_backup:
    kind: cloud-sql-create-backup
    source: cloud-sql-admin-source
-  restore_backup:
-    kind: cloud-sql-restore-backup
-    source: cloud-sql-admin-source

 toolsets:
  cloud_sql_mysql_admin_tools:
@@ -61,4 +58,3 @@ toolsets:
    - wait_for_operation
    - clone_instance
    - create_backup
-    - restore_backup
--- a/internal/prebuiltconfigs/tools/cloud-sql-postgres-admin.yaml
+++ b/internal/prebuiltconfigs/tools/cloud-sql-postgres-admin.yaml
@@ -49,9 +49,6 @@ tools:
  create_backup:
    kind: cloud-sql-create-backup
    source: cloud-sql-admin-source
-  restore_backup:
-    kind: cloud-sql-restore-backup
-    source: cloud-sql-admin-source

 toolsets:
  cloud_sql_postgres_admin_tools:
@@ -65,4 +62,3 @@ toolsets:
    - postgres_upgrade_precheck
    - clone_instance
    - create_backup
-    - restore_backup
--- a/internal/server/config.go
+++ b/internal/server/config.go
@@ -18,7 +18,6 @@ import (
 	"context"
 	"fmt"
 	"io"
-	"regexp"
 	"strings"

 	yaml "github.com/goccy/go-yaml"
@@ -67,14 +66,12 @@ type ServerConfig struct {
 	Stdio bool
 	// DisableReload indicates if the user has disabled dynamic reloading for Toolbox.
 	DisableReload bool
-	// UI indicates if Toolbox UI endpoints (/ui) are available.
+	// UI indicates if Toolbox UI endpoints (/ui) are available
 	UI bool
 	// Specifies a list of origins permitted to access this server.
 	AllowedOrigins []string
-	// Specifies a list of hosts permitted to access this server.
+	// Specifies a list of hosts permitted to access this server
 	AllowedHosts []string
-	// UserAgentMetadata specifies additional metadata to append to the User-Agent string.
-	UserAgentMetadata []string
 }

 type logFormat string
@@ -139,12 +136,12 @@ type PromptsetConfigs map[string]prompts.PromptsetConfig

 func UnmarshalResourceConfig(ctx context.Context, raw []byte) (SourceConfigs, AuthServiceConfigs, EmbeddingModelConfigs, ToolConfigs, ToolsetConfigs, PromptConfigs, error) {
 	// prepare configs map
-	var sourceConfigs SourceConfigs
-	var authServiceConfigs AuthServiceConfigs
-	var embeddingModelConfigs EmbeddingModelConfigs
-	var toolConfigs ToolConfigs
-	var toolsetConfigs ToolsetConfigs
-	var promptConfigs PromptConfigs
+	sourceConfigs := make(map[string]sources.SourceConfig)
+	authServiceConfigs := make(AuthServiceConfigs)
+	embeddingModelConfigs := make(EmbeddingModelConfigs)
+	toolConfigs := make(ToolConfigs)
+	toolsetConfigs := make(ToolsetConfigs)
+	promptConfigs := make(PromptConfigs)
 	// promptset configs is not yet supported

 	decoder := yaml.NewDecoder(bytes.NewReader(raw))
@@ -160,7 +157,7 @@ func UnmarshalResourceConfig(ctx context.Context, raw []byte) (SourceConfigs, Au
 		var kind, name string
 		var ok bool
 		if kind, ok = resource["kind"].(string); !ok {
-			return nil, nil, nil, nil, nil, nil, fmt.Errorf("missing 'kind' field or it is not a string: %v", resource)
+			return nil, nil, nil, nil, nil, nil, fmt.Errorf("missing 'kind' field or it is not a string")
 		}
 		if name, ok = resource["name"].(string); !ok {
 			return nil, nil, nil, nil, nil, nil, fmt.Errorf("missing 'name' field or it is not a string")
@@ -174,54 +171,36 @@ func UnmarshalResourceConfig(ctx context.Context, raw []byte) (SourceConfigs, Au
 			if err != nil {
 				return nil, nil, nil, nil, nil, nil, fmt.Errorf("error unmarshaling %s: %s", kind, err)
 			}
-			if sourceConfigs == nil {
-				sourceConfigs = make(SourceConfigs)
-			}
 			sourceConfigs[name] = c
 		case "authServices":
 			c, err := UnmarshalYAMLAuthServiceConfig(ctx, name, resource)
 			if err != nil {
 				return nil, nil, nil, nil, nil, nil, fmt.Errorf("error unmarshaling %s: %s", kind, err)
 			}
-			if authServiceConfigs == nil {
-				authServiceConfigs = make(AuthServiceConfigs)
-			}
 			authServiceConfigs[name] = c
 		case "tools":
 			c, err := UnmarshalYAMLToolConfig(ctx, name, resource)
 			if err != nil {
 				return nil, nil, nil, nil, nil, nil, fmt.Errorf("error unmarshaling %s: %s", kind, err)
 			}
-			if toolConfigs == nil {
-				toolConfigs = make(ToolConfigs)
-			}
 			toolConfigs[name] = c
 		case "toolsets":
 			c, err := UnmarshalYAMLToolsetConfig(ctx, name, resource)
 			if err != nil {
 				return nil, nil, nil, nil, nil, nil, fmt.Errorf("error unmarshaling %s: %s", kind, err)
 			}
-			if toolsetConfigs == nil {
-				toolsetConfigs = make(ToolsetConfigs)
-			}
 			toolsetConfigs[name] = c
 		case "embeddingModels":
 			c, err := UnmarshalYAMLEmbeddingModelConfig(ctx, name, resource)
 			if err != nil {
 				return nil, nil, nil, nil, nil, nil, fmt.Errorf("error unmarshaling %s: %s", kind, err)
 			}
-			if embeddingModelConfigs == nil {
-				embeddingModelConfigs = make(EmbeddingModelConfigs)
-			}
 			embeddingModelConfigs[name] = c
 		case "prompts":
 			c, err := UnmarshalYAMLPromptConfig(ctx, name, resource)
 			if err != nil {
 				return nil, nil, nil, nil, nil, nil, fmt.Errorf("error unmarshaling %s: %s", kind, err)
 			}
-			if promptConfigs == nil {
-				promptConfigs = make(PromptConfigs)
-			}
 			promptConfigs[name] = c
 		default:
 			return nil, nil, nil, nil, nil, nil, fmt.Errorf("invalid kind %s", kind)
@@ -297,45 +276,6 @@ func UnmarshalYAMLToolConfig(ctx context.Context, name string, r map[string]any)
 	if r["authRequired"] == nil {
 		r["authRequired"] = []string{}
 	}
-
-	// validify parameter references
-	if rawParams, ok := r["parameters"]; ok {
-		if paramsList, ok := rawParams.([]any); ok {
-			// Turn params into a map
-			validParamNames := make(map[string]bool)
-			for _, rawP := range paramsList {
-				if pMap, ok := rawP.(map[string]any); ok {
-					if pName, ok := pMap["name"].(string); ok && pName != "" {
-						validParamNames[pName] = true
-					}
-				}
-			}
-
-			// Validate references
-			for i, rawP := range paramsList {
-				pMap, ok := rawP.(map[string]any)
-				if !ok {
-					continue
-				}
-
-				pName, _ := pMap["name"].(string)
-				refName, _ := pMap["valueFromParam"].(string)
-
-				if refName != "" {
-					// Check if the referenced parameter exists
-					if !validParamNames[refName] {
-						return nil, fmt.Errorf("tool %q config error: parameter %q (index %d) references '%q' in the 'valueFromParam' field, which is not a defined parameter", name, pName, i, refName)
-					}
-
-					// Check for self-reference
-					if refName == pName {
-						return nil, fmt.Errorf("tool %q config error: parameter %q cannot copy value from itself", name, pName)
-					}
-				}
-			}
-		}
-	}
-
 	dec, err := util.NewStrictDecoder(r)
 	if err != nil {
 		return nil, fmt.Errorf("error creating decoder: %s", err)
@@ -349,11 +289,7 @@ func UnmarshalYAMLToolConfig(ctx context.Context, name string, r map[string]any)

 func UnmarshalYAMLToolsetConfig(ctx context.Context, name string, r map[string]any) (tools.ToolsetConfig, error) {
 	var toolsetConfig tools.ToolsetConfig
-	toolList, ok := r["tools"].([]any)
-	if !ok {
-		return toolsetConfig, fmt.Errorf("tools is missing or not a list of strings: %v", r)
-	}
-	justTools := map[string]any{"tools": toolList}
+	justTools := map[string]any{"tools": r["tools"]}
 	dec, err := util.NewStrictDecoder(justTools)
 	if err != nil {
 		return toolsetConfig, fmt.Errorf("error creating decoder: %s", err)
@@ -388,23 +324,3 @@ func UnmarshalYAMLPromptConfig(ctx context.Context, name string, r map[string]an
 	}
 	return promptCfg, nil
 }
-
-// Tools naming validation is added in the MCP v2025-11-25, but we'll be
-// implementing it across Toolbox
-// Tool names SHOULD be between 1 and 128 characters in length (inclusive).
-// Tool names SHOULD be considered case-sensitive.
-// The following SHOULD be the only allowed characters: uppercase and lowercase ASCII letters (A-Z, a-z), digits (0-9), underscore (_), hyphen (-), and dot (.)
-// Tool names SHOULD NOT contain spaces, commas, or other special characters.
-// Tool names SHOULD be unique within a server.
-func NameValidation(name string) error {
-	strLen := len(name)
-	if strLen < 1 || strLen > 128 {
-		return fmt.Errorf("resource name SHOULD be between 1 and 128 characters in length (inclusive)")
-	}
-	validChars := regexp.MustCompile("^[a-zA-Z0-9_.-]+$")
-	isValid := validChars.MatchString(name)
-	if !isValid {
-		return fmt.Errorf("invalid character for resource name; only uppercase and lowercase ASCII letters (A-Z, a-z), digits (0-9), underscore (_), hyphen (-), and dot (.) is allowed")
-	}
-	return nil
-}
--- a/internal/server/mcp/mcp.go
+++ b/internal/server/mcp/mcp.go
@@ -27,21 +27,19 @@ import (
 	v20241105 "github.com/googleapis/genai-toolbox/internal/server/mcp/v20241105"
 	v20250326 "github.com/googleapis/genai-toolbox/internal/server/mcp/v20250326"
 	v20250618 "github.com/googleapis/genai-toolbox/internal/server/mcp/v20250618"
-	v20251125 "github.com/googleapis/genai-toolbox/internal/server/mcp/v20251125"
 	"github.com/googleapis/genai-toolbox/internal/server/resources"
 	"github.com/googleapis/genai-toolbox/internal/tools"
 )

 // LATEST_PROTOCOL_VERSION is the latest version of the MCP protocol supported.
 // Update the version used in InitializeResponse when this value is updated.
-const LATEST_PROTOCOL_VERSION = v20251125.PROTOCOL_VERSION
+const LATEST_PROTOCOL_VERSION = v20250618.PROTOCOL_VERSION

 // SUPPORTED_PROTOCOL_VERSIONS is the MCP protocol versions that are supported.
 var SUPPORTED_PROTOCOL_VERSIONS = []string{
 	v20241105.PROTOCOL_VERSION,
 	v20250326.PROTOCOL_VERSION,
 	v20250618.PROTOCOL_VERSION,
-	v20251125.PROTOCOL_VERSION,
 }

 // InitializeResponse runs capability negotiation and protocol version agreement.
@@ -104,8 +102,6 @@ func NotificationHandler(ctx context.Context, body []byte) error {
 // This is the Operation phase of the lifecycle for MCP client-server connections.
 func ProcessMethod(ctx context.Context, mcpVersion string, id jsonrpc.RequestId, method string, toolset tools.Toolset, promptset prompts.Promptset, resourceMgr *resources.ResourceManager, body []byte, header http.Header) (any, error) {
 	switch mcpVersion {
-	case v20251125.PROTOCOL_VERSION:
-		return v20251125.ProcessMethod(ctx, id, method, toolset, promptset, resourceMgr, body, header)
 	case v20250618.PROTOCOL_VERSION:
 		return v20250618.ProcessMethod(ctx, id, method, toolset, promptset, resourceMgr, body, header)
 	case v20250326.PROTOCOL_VERSION:
--- a/internal/server/mcp/v20241105/method.go
+++ b/internal/server/mcp/v20241105/method.go
@@ -183,13 +183,6 @@ func toolsCallHandler(ctx context.Context, id jsonrpc.RequestId, resourceMgr *re
 	}
 	logger.DebugContext(ctx, fmt.Sprintf("invocation params: %s", params))

-	embeddingModels := resourceMgr.GetEmbeddingModelMap()
-	params, err = tool.EmbedParams(ctx, params, embeddingModels)
-	if err != nil {
-		err = fmt.Errorf("error embedding parameters: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_PARAMS, err.Error(), nil), err
-	}
-
 	// run tool invocation and generate response.
 	results, err := tool.Invoke(ctx, resourceMgr, params, accessToken)
 	if err != nil {
--- a/internal/server/mcp/v20250326/method.go
+++ b/internal/server/mcp/v20250326/method.go
@@ -183,13 +183,6 @@ func toolsCallHandler(ctx context.Context, id jsonrpc.RequestId, resourceMgr *re
 	}
 	logger.DebugContext(ctx, fmt.Sprintf("invocation params: %s", params))

-	embeddingModels := resourceMgr.GetEmbeddingModelMap()
-	params, err = tool.EmbedParams(ctx, params, embeddingModels)
-	if err != nil {
-		err = fmt.Errorf("error embedding parameters: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_PARAMS, err.Error(), nil), err
-	}
-
 	// run tool invocation and generate response.
 	results, err := tool.Invoke(ctx, resourceMgr, params, accessToken)
 	if err != nil {
--- a/internal/server/mcp/v20250618/method.go
+++ b/internal/server/mcp/v20250618/method.go
@@ -176,13 +176,6 @@ func toolsCallHandler(ctx context.Context, id jsonrpc.RequestId, resourceMgr *re
 	}
 	logger.DebugContext(ctx, fmt.Sprintf("invocation params: %s", params))

-	embeddingModels := resourceMgr.GetEmbeddingModelMap()
-	params, err = tool.EmbedParams(ctx, params, embeddingModels)
-	if err != nil {
-		err = fmt.Errorf("error embedding parameters: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_PARAMS, err.Error(), nil), err
-	}
-
 	// run tool invocation and generate response.
 	results, err := tool.Invoke(ctx, resourceMgr, params, accessToken)
 	if err != nil {
--- a/internal/server/mcp/v20251125/method.go
+++ b/internal/server/mcp/v20251125/method.go
@@ -1,333 +0,0 @@
-// Copyright 2026 Google LLC
-//
-// Licensed under the Apache License, Version 2.0 (the "License");
-// you may not use this file except in compliance with the License.
-// You may obtain a copy of the License at
-//
-//     http://www.apache.org/licenses/LICENSE-2.0
-//
-// Unless required by applicable law or agreed to in writing, software
-// distributed under the License is distributed on an "AS IS" BASIS,
-// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-// See the License for the specific language governing permissions and
-// limitations under the License.
-
-package v20251125
-
-import (
-	"bytes"
-	"context"
-	"encoding/json"
-	"errors"
-	"fmt"
-	"net/http"
-	"strings"
-
-	"github.com/googleapis/genai-toolbox/internal/prompts"
-	"github.com/googleapis/genai-toolbox/internal/server/mcp/jsonrpc"
-	"github.com/googleapis/genai-toolbox/internal/server/resources"
-	"github.com/googleapis/genai-toolbox/internal/tools"
-	"github.com/googleapis/genai-toolbox/internal/util"
-)
-
-// ProcessMethod returns a response for the request.
-func ProcessMethod(ctx context.Context, id jsonrpc.RequestId, method string, toolset tools.Toolset, promptset prompts.Promptset, resourceMgr *resources.ResourceManager, body []byte, header http.Header) (any, error) {
-	switch method {
-	case PING:
-		return pingHandler(id)
-	case TOOLS_LIST:
-		return toolsListHandler(id, toolset, body)
-	case TOOLS_CALL:
-		return toolsCallHandler(ctx, id, resourceMgr, body, header)
-	case PROMPTS_LIST:
-		return promptsListHandler(ctx, id, promptset, body)
-	case PROMPTS_GET:
-		return promptsGetHandler(ctx, id, resourceMgr, body)
-	default:
-		err := fmt.Errorf("invalid method %s", method)
-		return jsonrpc.NewError(id, jsonrpc.METHOD_NOT_FOUND, err.Error(), nil), err
-	}
-}
-
-// pingHandler handles the "ping" method by returning an empty response.
-func pingHandler(id jsonrpc.RequestId) (any, error) {
-	return jsonrpc.JSONRPCResponse{
-		Jsonrpc: jsonrpc.JSONRPC_VERSION,
-		Id:      id,
-		Result:  struct{}{},
-	}, nil
-}
-
-func toolsListHandler(id jsonrpc.RequestId, toolset tools.Toolset, body []byte) (any, error) {
-	var req ListToolsRequest
-	if err := json.Unmarshal(body, &req); err != nil {
-		err = fmt.Errorf("invalid mcp tools list request: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_REQUEST, err.Error(), nil), err
-	}
-
-	result := ListToolsResult{
-		Tools: toolset.McpManifest,
-	}
-	return jsonrpc.JSONRPCResponse{
-		Jsonrpc: jsonrpc.JSONRPC_VERSION,
-		Id:      id,
-		Result:  result,
-	}, nil
-}
-
-// toolsCallHandler generate a response for tools call.
-func toolsCallHandler(ctx context.Context, id jsonrpc.RequestId, resourceMgr *resources.ResourceManager, body []byte, header http.Header) (any, error) {
-	authServices := resourceMgr.GetAuthServiceMap()
-
-	// retrieve logger from context
-	logger, err := util.LoggerFromContext(ctx)
-	if err != nil {
-		return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, err.Error(), nil), err
-	}
-
-	var req CallToolRequest
-	if err = json.Unmarshal(body, &req); err != nil {
-		err = fmt.Errorf("invalid mcp tools call request: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_REQUEST, err.Error(), nil), err
-	}
-
-	toolName := req.Params.Name
-	toolArgument := req.Params.Arguments
-	logger.DebugContext(ctx, fmt.Sprintf("tool name: %s", toolName))
-	tool, ok := resourceMgr.GetTool(toolName)
-	if !ok {
-		err = fmt.Errorf("invalid tool name: tool with name %q does not exist", toolName)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_PARAMS, err.Error(), nil), err
-	}
-
-	// Get access token
-	authTokenHeadername, err := tool.GetAuthTokenHeaderName(resourceMgr)
-	if err != nil {
-		errMsg := fmt.Errorf("error during invocation: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, errMsg.Error(), nil), errMsg
-	}
-	accessToken := tools.AccessToken(header.Get(authTokenHeadername))
-
-	// Check if this specific tool requires the standard authorization header
-	clientAuth, err := tool.RequiresClientAuthorization(resourceMgr)
-	if err != nil {
-		errMsg := fmt.Errorf("error during invocation: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, errMsg.Error(), nil), errMsg
-	}
-	if clientAuth {
-		if accessToken == "" {
-			return jsonrpc.NewError(id, jsonrpc.INVALID_REQUEST, "missing access token in the 'Authorization' header", nil), util.ErrUnauthorized
-		}
-	}
-
-	// marshal arguments and decode it using decodeJSON instead to prevent loss between floats/int.
-	aMarshal, err := json.Marshal(toolArgument)
-	if err != nil {
-		err = fmt.Errorf("unable to marshal tools argument: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, err.Error(), nil), err
-	}
-
-	var data map[string]any
-	if err = util.DecodeJSON(bytes.NewBuffer(aMarshal), &data); err != nil {
-		err = fmt.Errorf("unable to decode tools argument: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, err.Error(), nil), err
-	}
-
-	// Tool authentication
-	// claimsFromAuth maps the name of the authservice to the claims retrieved from it.
-	claimsFromAuth := make(map[string]map[string]any)
-
-	// if using stdio, header will be nil and auth will not be supported
-	if header != nil {
-		for _, aS := range authServices {
-			claims, err := aS.GetClaimsFromHeader(ctx, header)
-			if err != nil {
-				logger.DebugContext(ctx, err.Error())
-				continue
-			}
-			if claims == nil {
-				// authService not present in header
-				continue
-			}
-			claimsFromAuth[aS.GetName()] = claims
-		}
-	}
-
-	// Tool authorization check
-	verifiedAuthServices := make([]string, len(claimsFromAuth))
-	i := 0
-	for k := range claimsFromAuth {
-		verifiedAuthServices[i] = k
-		i++
-	}
-
-	// Check if any of the specified auth services is verified
-	isAuthorized := tool.Authorized(verifiedAuthServices)
-	if !isAuthorized {
-		err = fmt.Errorf("unauthorized Tool call: Please make sure your specify correct auth headers: %w", util.ErrUnauthorized)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_REQUEST, err.Error(), nil), err
-	}
-	logger.DebugContext(ctx, "tool invocation authorized")
-
-	params, err := tool.ParseParams(data, claimsFromAuth)
-	if err != nil {
-		err = fmt.Errorf("provided parameters were invalid: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_PARAMS, err.Error(), nil), err
-	}
-	logger.DebugContext(ctx, fmt.Sprintf("invocation params: %s", params))
-
-	embeddingModels := resourceMgr.GetEmbeddingModelMap()
-	params, err = tool.EmbedParams(ctx, params, embeddingModels)
-	if err != nil {
-		err = fmt.Errorf("error embedding parameters: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_PARAMS, err.Error(), nil), err
-	}
-
-	// run tool invocation and generate response.
-	results, err := tool.Invoke(ctx, resourceMgr, params, accessToken)
-	if err != nil {
-		errStr := err.Error()
-		// Missing authService tokens.
-		if errors.Is(err, util.ErrUnauthorized) {
-			return jsonrpc.NewError(id, jsonrpc.INVALID_REQUEST, err.Error(), nil), err
-		}
-		// Upstream auth error
-		if strings.Contains(errStr, "Error 401") || strings.Contains(errStr, "Error 403") {
-			if clientAuth {
-				// Error with client credentials should pass down to the client
-				return jsonrpc.NewError(id, jsonrpc.INVALID_REQUEST, err.Error(), nil), err
-			}
-			// Auth error with ADC should raise internal 500 error
-			return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, err.Error(), nil), err
-		}
-		text := TextContent{
-			Type: "text",
-			Text: err.Error(),
-		}
-		return jsonrpc.JSONRPCResponse{
-			Jsonrpc: jsonrpc.JSONRPC_VERSION,
-			Id:      id,
-			Result:  CallToolResult{Content: []TextContent{text}, IsError: true},
-		}, nil
-	}
-
-	content := make([]TextContent, 0)
-
-	sliceRes, ok := results.([]any)
-	if !ok {
-		sliceRes = []any{results}
-	}
-
-	for _, d := range sliceRes {
-		text := TextContent{Type: "text"}
-		dM, err := json.Marshal(d)
-		if err != nil {
-			text.Text = fmt.Sprintf("fail to marshal: %s, result: %s", err, d)
-		} else {
-			text.Text = string(dM)
-		}
-		content = append(content, text)
-	}
-
-	return jsonrpc.JSONRPCResponse{
-		Jsonrpc: jsonrpc.JSONRPC_VERSION,
-		Id:      id,
-		Result:  CallToolResult{Content: content},
-	}, nil
-}
-
-// promptsListHandler handles the "prompts/list" method.
-func promptsListHandler(ctx context.Context, id jsonrpc.RequestId, promptset prompts.Promptset, body []byte) (any, error) {
-	// retrieve logger from context
-	logger, err := util.LoggerFromContext(ctx)
-	if err != nil {
-		return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, err.Error(), nil), err
-	}
-	logger.DebugContext(ctx, "handling prompts/list request")
-
-	var req ListPromptsRequest
-	if err := json.Unmarshal(body, &req); err != nil {
-		err = fmt.Errorf("invalid mcp prompts list request: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_REQUEST, err.Error(), nil), err
-	}
-
-	result := ListPromptsResult{
-		Prompts: promptset.McpManifest,
-	}
-	logger.DebugContext(ctx, fmt.Sprintf("returning %d prompts", len(promptset.McpManifest)))
-	return jsonrpc.JSONRPCResponse{
-		Jsonrpc: jsonrpc.JSONRPC_VERSION,
-		Id:      id,
-		Result:  result,
-	}, nil
-}
-
-// promptsGetHandler handles the "prompts/get" method.
-func promptsGetHandler(ctx context.Context, id jsonrpc.RequestId, resourceMgr *resources.ResourceManager, body []byte) (any, error) {
-	// retrieve logger from context
-	logger, err := util.LoggerFromContext(ctx)
-	if err != nil {
-		return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, err.Error(), nil), err
-	}
-	logger.DebugContext(ctx, "handling prompts/get request")
-
-	var req GetPromptRequest
-	if err := json.Unmarshal(body, &req); err != nil {
-		err = fmt.Errorf("invalid mcp prompts/get request: %w", err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_REQUEST, err.Error(), nil), err
-	}
-
-	promptName := req.Params.Name
-	logger.DebugContext(ctx, fmt.Sprintf("prompt name: %s", promptName))
-	prompt, ok := resourceMgr.GetPrompt(promptName)
-	if !ok {
-		err := fmt.Errorf("prompt with name %q does not exist", promptName)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_PARAMS, err.Error(), nil), err
-	}
-
-	// Parse the arguments provided in the request.
-	argValues, err := prompt.ParseArgs(req.Params.Arguments, nil)
-	if err != nil {
-		err = fmt.Errorf("invalid arguments for prompt %q: %w", promptName, err)
-		return jsonrpc.NewError(id, jsonrpc.INVALID_PARAMS, err.Error(), nil), err
-	}
-	logger.DebugContext(ctx, fmt.Sprintf("parsed args: %v", argValues))
-
-	// Substitute the argument values into the prompt's messages.
-	substituted, err := prompt.SubstituteParams(argValues)
-	if err != nil {
-		err = fmt.Errorf("error substituting params for prompt %q: %w", promptName, err)
-		return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, err.Error(), nil), err
-	}
-
-	// Cast the result to the expected []prompts.Message type.
-	substitutedMessages, ok := substituted.([]prompts.Message)
-	if !ok {
-		err = fmt.Errorf("internal error: SubstituteParams returned unexpected type")
-		return jsonrpc.NewError(id, jsonrpc.INTERNAL_ERROR, err.Error(), nil), err
-	}
-	logger.DebugContext(ctx, "substituted params successfully")
-
-	// Format the response messages into the required structure.
-	promptMessages := make([]PromptMessage, len(substitutedMessages))
-	for i, msg := range substitutedMessages {
-		promptMessages[i] = PromptMessage{
-			Role: msg.Role,
-			Content: TextContent{
-				Type: "text",
-				Text: msg.Content,
-			},
-		}
-	}
-
-	result := GetPromptResult{
-		Description: prompt.Manifest().Description,
-		Messages:    promptMessages,
-	}
-
-	return jsonrpc.JSONRPCResponse{
-		Jsonrpc: jsonrpc.JSONRPC_VERSION,
-		Id:      id,
-		Result:  result,
-	}, nil
-}
--- a/internal/server/mcp/v20251125/types.go
+++ b/internal/server/mcp/v20251125/types.go
@@ -1,219 +0,0 @@
-// Copyright 2026 Google LLC
-//
-// Licensed under the Apache License, Version 2.0 (the "License");
-// you may not use this file except in compliance with the License.
-// You may obtain a copy of the License at
-//
-//     http://www.apache.org/licenses/LICENSE-2.0
-//
-// Unless required by applicable law or agreed to in writing, software
-// distributed under the License is distributed on an "AS IS" BASIS,
-// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-// See the License for the specific language governing permissions and
-// limitations under the License.
-
-package v20251125
-
-import (
-	"github.com/googleapis/genai-toolbox/internal/prompts"
-	"github.com/googleapis/genai-toolbox/internal/server/mcp/jsonrpc"
-	"github.com/googleapis/genai-toolbox/internal/tools"
-)
-
-// SERVER_NAME is the server name used in Implementation.
-const SERVER_NAME = "Toolbox"
-
-// PROTOCOL_VERSION is the version of the MCP protocol in this package.
-const PROTOCOL_VERSION = "2025-11-25"
-
-// methods that are supported.
-const (
-	PING         = "ping"
-	TOOLS_LIST   = "tools/list"
-	TOOLS_CALL   = "tools/call"
-	PROMPTS_LIST = "prompts/list"
-	PROMPTS_GET  = "prompts/get"
-)
-
-/* Empty result */
-
-// EmptyResult represents a response that indicates success but carries no data.
-type EmptyResult jsonrpc.Result
-
-/* Pagination */
-
-// Cursor is an opaque token used to represent a cursor for pagination.
-type Cursor string
-
-type PaginatedRequest struct {
-	jsonrpc.Request
-	Params struct {
-		// An opaque token representing the current pagination position.
-		// If provided, the server should return results starting after this cursor.
-		Cursor Cursor `json:"cursor,omitempty"`
-	} `json:"params,omitempty"`
-}
-
-type PaginatedResult struct {
-	jsonrpc.Result
-	// An opaque token representing the pagination position after the last returned result.
-	// If present, there may be more results available.
-	NextCursor Cursor `json:"nextCursor,omitempty"`
-}
-
-/* Tools */
-
-// Sent from the client to request a list of tools the server has.
-type ListToolsRequest struct {
-	PaginatedRequest
-}
-
-// The server's response to a tools/list request from the client.
-type ListToolsResult struct {
-	PaginatedResult
-	Tools []tools.McpManifest `json:"tools"`
-}
-
-// Used by the client to invoke a tool provided by the server.
-type CallToolRequest struct {
-	jsonrpc.Request
-	Params struct {
-		Name      string         `json:"name"`
-		Arguments map[string]any `json:"arguments,omitempty"`
-	} `json:"params,omitempty"`
-}
-
-// The sender or recipient of messages and data in a conversation.
-type Role string
-
-const (
-	RoleUser      Role = "user"
-	RoleAssistant Role = "assistant"
-)
-
-// Base for objects that include optional annotations for the client.
-// The client can use annotations to inform how objects are used or displayed
-type Annotated struct {
-	Annotations *struct {
-		// Describes who the intended customer of this object or data is.
-		// It can include multiple entries to indicate content useful for multiple
-		// audiences (e.g., `["user", "assistant"]`).
-		Audience []Role `json:"audience,omitempty"`
-		// Describes how important this data is for operating the server.
-		//
-		// A value of 1 means "most important," and indicates that the data is
-		// effectively required, while 0 means "least important," and indicates that
-		// the data is entirely optional.
-		//
-		// @TJS-type number
-		// @minimum 0
-		// @maximum 1
-		Priority float64 `json:"priority,omitempty"`
-	} `json:"annotations,omitempty"`
-}
-
-// TextContent represents text provided to or from an LLM.
-type TextContent struct {
-	Annotated
-	Type string `json:"type"`
-	// The text content of the message.
-	Text string `json:"text"`
-}
-
-// The server's response to a tool call.
-//
-// Any errors that originate from the tool SHOULD be reported inside the result
-// object, with `isError` set to true, _not_ as an MCP protocol-level error
-// response. Otherwise, the LLM would not be able to see that an error occurred
-// and self-correct.
-//
-// However, any errors in _finding_ the tool, an error indicating that the
-// server does not support tool calls, or any other exceptional conditions,
-// should be reported as an MCP error response.
-type CallToolResult struct {
-	jsonrpc.Result
-	// Could be either a TextContent, ImageContent, or EmbeddedResources
-	// For Toolbox, we will only be sending TextContent
-	Content []TextContent `json:"content"`
-	// Whether the tool call ended in an error.
-	// If not set, this is assumed to be false (the call was successful).
-	//
-	// Any errors that originate from the tool SHOULD be reported inside the result
-	// object, with `isError` set to true, _not_ as an MCP protocol-level error
-	// response. Otherwise, the LLM would not be able to see that an error occurred
-	// and self-correct.
-	//
-	// However, any errors in _finding_ the tool, an error indicating that the
-	// server does not support tool calls, or any other exceptional conditions,
-	// should be reported as an MCP error response.
-	IsError bool `json:"isError,omitempty"`
-	// An optional JSON object that represents the structured result of the tool call.
-	StructuredContent map[string]any `json:"structuredContent,omitempty"`
-}
-
-// Additional properties describing a Tool to clients.
-//
-// NOTE: all properties in ToolAnnotations are **hints**.
-// They are not guaranteed to provide a faithful description of
-// tool behavior (including descriptive properties like `title`).
-//
-// Clients should never make tool use decisions based on ToolAnnotations
-// received from untrusted servers.
-type ToolAnnotations struct {
-	// A human-readable title for the tool.
-	Title string `json:"title,omitempty"`
-	// If true, the tool does not modify its environment.
-	// Default: false
-	ReadOnlyHint bool `json:"readOnlyHint,omitempty"`
-	// If true, the tool may perform destructive updates to its environment.
-	// If false, the tool performs only additive updates.
-	// (This property is meaningful only when `readOnlyHint == false`)
-	// Default: true
-	DestructiveHint bool `json:"destructiveHint,omitempty"`
-	// If true, calling the tool repeatedly with the same arguments
-	// will have no additional effect on the its environment.
-	// (This property is meaningful only when `readOnlyHint == false`)
-	// Default: false
-	IdempotentHint bool `json:"idempotentHint,omitempty"`
-	// If true, this tool may interact with an "open world" of external
-	// entities. If false, the tool's domain of interaction is closed.
-	// For example, the world of a web search tool is open, whereas that
-	// of a memory tool is not.
-	// Default: true
-	OpenWorldHint bool `json:"openWorldHint,omitempty"`
-}
-
-/* Prompts */
-
-// Sent from the client to request a list of prompts the server has.
-type ListPromptsRequest struct {
-	PaginatedRequest
-}
-
-// The server's response to a prompts/list request from the client.
-type ListPromptsResult struct {
-	PaginatedResult
-	Prompts []prompts.McpManifest `json:"prompts"`
-}
-
-// Used by the client to get a prompt provided by the server.
-type GetPromptRequest struct {
-	jsonrpc.Request
-	Params struct {
-		Name      string         `json:"name"`
-		Arguments map[string]any `json:"arguments,omitempty"`
-	} `json:"params"`
-}
-
-// The server's response to a prompts/get request from the client.
-type GetPromptResult struct {
-	jsonrpc.Result
-	Description string          `json:"description,omitempty"`
-	Messages    []PromptMessage `json:"messages"`
-}
-
-// Describes a message returned as part of a prompt.
-type PromptMessage struct {
-	Role    string      `json:"role"`
-	Content TextContent `json:"content"`
-}
--- a/internal/server/mcp_test.go
+++ b/internal/server/mcp_test.go
@@ -37,7 +37,6 @@ const jsonrpcVersion = "2.0"
 const protocolVersion20241105 = "2024-11-05"
 const protocolVersion20250326 = "2025-03-26"
 const protocolVersion20250618 = "2025-06-18"
-const protocolVersion20251125 = "2025-11-25"
 const serverName = "Toolbox"

 var basicInputSchema = map[string]any{
@@ -486,23 +485,6 @@ func TestMcpEndpoint(t *testing.T) {
 				},
 			},
 		},
-		{
-			name:     "version 2025-11-25",
-			protocol: protocolVersion20251125,
-			idHeader: false,
-			initWant: map[string]any{
-				"jsonrpc": "2.0",
-				"id":      "mcp-initialize",
-				"result": map[string]any{
-					"protocolVersion": "2025-11-25",
-					"capabilities": map[string]any{
-						"tools":   map[string]any{"listChanged": false},
-						"prompts": map[string]any{"listChanged": false},
-					},
-					"serverInfo": map[string]any{"name": serverName, "version": fakeVersionString},
-				},
-			},
-		},
 	}
 	for _, vtc := range versTestCases {
 		t.Run(vtc.name, func(t *testing.T) {
@@ -512,7 +494,8 @@ func TestMcpEndpoint(t *testing.T) {
 			if sessionId != "" {
 				header["Mcp-Session-Id"] = sessionId
 			}
-			if vtc.protocol != protocolVersion20241105 && vtc.protocol != protocolVersion20250326 {
+
+			if vtc.protocol == protocolVersion20250618 {
 				header["MCP-Protocol-Version"] = vtc.protocol
 			}

--- a/internal/server/server.go
+++ b/internal/server/server.go
@@ -64,11 +64,7 @@ func InitializeConfigs(ctx context.Context, cfg ServerConfig) (
 	map[string]prompts.Promptset,
 	error,
 ) {
-	metadataStr := cfg.Version
-	if len(cfg.UserAgentMetadata) > 0 {
-		metadataStr += "+" + strings.Join(cfg.UserAgentMetadata, "+")
-	}
-	ctx = util.WithUserAgent(ctx, metadataStr)
+	ctx = util.WithUserAgent(ctx, cfg.Version)
 	instrumentation, err := util.InstrumentationFromContext(ctx)
 	if err != nil {
 		panic(err)
@@ -308,14 +304,10 @@ func hostCheck(allowedHosts map[string]struct{}) func(http.Handler) http.Handler
 	return func(next http.Handler) http.Handler {
 		return http.HandlerFunc(func(w http.ResponseWriter, r *http.Request) {
 			_, hasWildcard := allowedHosts["*"]
-			hostname := r.Host
-			if host, _, err := net.SplitHostPort(r.Host); err == nil {
-				hostname = host
-			}
-			_, hostIsAllowed := allowedHosts[hostname]
+			_, hostIsAllowed := allowedHosts[r.Host]
 			if !hasWildcard && !hostIsAllowed {
-				// Return 403 Forbidden to block the attack
-				http.Error(w, "Invalid Host header", http.StatusForbidden)
+				// Return 400 Bad Request or 403 Forbidden to block the attack
+				http.Error(w, "Invalid Host header", http.StatusBadRequest)
 				return
 			}
 			next.ServeHTTP(w, r)
@@ -414,11 +406,7 @@ func NewServer(ctx context.Context, cfg ServerConfig) (*Server, error) {
 	}
 	allowedHostsMap := make(map[string]struct{}, len(cfg.AllowedHosts))
 	for _, h := range cfg.AllowedHosts {
-		hostname := h
-		if host, _, err := net.SplitHostPort(h); err == nil {
-			hostname = host
-		}
-		allowedHostsMap[hostname] = struct{}{}
+		allowedHostsMap[h] = struct{}{}
 	}
 	r.Use(hostCheck(allowedHostsMap))

--- a/internal/server/server_test.go
+++ b/internal/server/server_test.go
@@ -200,62 +200,3 @@ func TestUpdateServer(t *testing.T) {
 		t.Errorf("error updating server, promptset (-want +got):\n%s", diff)
 	}
 }
-
-func TestNameValidation(t *testing.T) {
-	testCases := []struct {
-		desc         string
-		resourceName string
-		errStr       string
-	}{
-		{
-			desc:         "names with 0 length",
-			resourceName: "",
-			errStr:       "resource name SHOULD be between 1 and 128 characters in length (inclusive)",
-		},
-		{
-			desc:         "names with allowed length",
-			resourceName: "foo",
-		},
-		{
-			desc:         "names with 128 length",
-			resourceName: strings.Repeat("a", 128),
-		},
-		{
-			desc:         "names with more than 128 length",
-			resourceName: strings.Repeat("a", 129),
-			errStr:       "resource name SHOULD be between 1 and 128 characters in length (inclusive)",
-		},
-		{
-			desc:         "names with space",
-			resourceName: "foo bar",
-			errStr:       "invalid character for resource name; only uppercase and lowercase ASCII letters (A-Z, a-z), digits (0-9), underscore (_), hyphen (-), and dot (.) is allowed",
-		},
-		{
-			desc:         "names with commas",
-			resourceName: "foo,bar",
-			errStr:       "invalid character for resource name; only uppercase and lowercase ASCII letters (A-Z, a-z), digits (0-9), underscore (_), hyphen (-), and dot (.) is allowed",
-		},
-		{
-			desc:         "names with other special character",
-			resourceName: "foo!",
-			errStr:       "invalid character for resource name; only uppercase and lowercase ASCII letters (A-Z, a-z), digits (0-9), underscore (_), hyphen (-), and dot (.) is allowed",
-		},
-		{
-			desc:         "names with allowed special character",
-			resourceName: "foo_.-bar6",
-		},
-	}
-	for _, tc := range testCases {
-		t.Run(tc.desc, func(t *testing.T) {
-			err := server.NameValidation(tc.resourceName)
-			if err != nil {
-				if tc.errStr != err.Error() {
-					t.Fatalf("unexpected error: %s", err)
-				}
-			}
-			if err == nil && tc.errStr != "" {
-				t.Fatalf("expect error: %s", tc.errStr)
-			}
-		})
-	}
-}
--- a/internal/sources/cloudsqladmin/cloud_sql_admin.go
+++ b/internal/sources/cloudsqladmin/cloud_sql_admin.go
@@ -19,7 +19,6 @@ import (
 	"fmt"
 	"net/http"
 	"regexp"
-	"strconv"
 	"strings"
 	"text/template"
 	"time"
@@ -37,10 +36,7 @@ import (

 const SourceType string = "cloud-sql-admin"

-var (
-	targetLinkRegex = regexp.MustCompile(`/projects/([^/]+)/instances/([^/]+)/databases/([^/]+)`)
-	backupDRRegex   = regexp.MustCompile(`^projects/([^/]+)/locations/([^/]+)/backupVaults/([^/]+)/dataSources/([^/]+)/backups/([^/]+)$`)
-)
+var targetLinkRegex = regexp.MustCompile(`/projects/([^/]+)/instances/([^/]+)/databases/([^/]+)`)

 // validate interface
 var _ sources.SourceConfig = Config{}
@@ -378,48 +374,6 @@ func (s *Source) InsertBackupRun(ctx context.Context, project, instance, locatio
 	return resp, nil
 }

-func (s *Source) RestoreBackup(ctx context.Context, targetProject, targetInstance, sourceProject, sourceInstance, backupID, accessToken string) (any, error) {
-	request := &sqladmin.InstancesRestoreBackupRequest{}
-
-	// There are 3 scenarios for the backup identifier:
-	// 1. The identifier is an int64 containing the timestamp of the BackupRun.
-	//    This is used to restore standard backups, and the RestoreBackupContext
-	//    field should be populated with the backup ID and source instance info.
-	// 2. The identifier is a string of the format
-	//    'projects/{project-id}/locations/{location}/backupVaults/{backupvault}/dataSources/{datasource}/backups/{backup-uid}'.
-	//    This is used to restore BackupDR backups, and the BackupdrBackup field
-	//    should be populated.
-	// 3. The identifer is a string of the format
-	//    'projects/{project-id}/backups/{backup-uid}'. In this case, the Backup
-	//    field should be populated.
-	if backupRunID, err := strconv.ParseInt(backupID, 10, 64); err == nil {
-		if sourceProject == "" || targetInstance == "" {
-			return nil, fmt.Errorf("source project and instance are required when restoring via backup ID")
-		}
-		request.RestoreBackupContext = &sqladmin.RestoreBackupContext{
-			Project:     sourceProject,
-			InstanceId:  sourceInstance,
-			BackupRunId: backupRunID,
-		}
-	} else if backupDRRegex.MatchString(backupID) {
-		request.BackupdrBackup = backupID
-	} else {
-		request.Backup = backupID
-	}
-
-	service, err := s.GetService(ctx, string(accessToken))
-	if err != nil {
-		return nil, err
-	}
-
-	resp, err := service.Instances.RestoreBackup(targetProject, targetInstance, request).Do()
-	if err != nil {
-		return nil, fmt.Errorf("error restoring backup: %w", err)
-	}
-
-	return resp, nil
-}
-
 func generateCloudSQLConnectionMessage(ctx context.Context, source *Source, logger log.Logger, opResponse map[string]any, connectionMessageTemplate string) (string, bool) {
 	operationType, ok := opResponse["operationType"].(string)
 	if !ok || operationType != "CREATE_DATABASE" {
--- a/internal/sources/dataplex/dataplex.go
+++ b/internal/sources/dataplex/dataplex.go
@@ -26,9 +26,7 @@ import (
 	"github.com/googleapis/genai-toolbox/internal/util"
 	"go.opentelemetry.io/otel/trace"
 	"golang.org/x/oauth2/google"
-	"google.golang.org/api/iterator"
 	"google.golang.org/api/option"
-	grpcstatus "google.golang.org/grpc/status"
 )

 const SourceType string = "dataplex"
@@ -175,17 +173,8 @@ func (s *Source) SearchAspectTypes(ctx context.Context, query string, pageSize i
 	var results []*dataplexpb.AspectType
 	for {
 		entry, err := it.Next()
-
-		if err == iterator.Done {
-			break
-		}
 		if err != nil {
-			if st, ok := grpcstatus.FromError(err); ok {
-				errorCode := st.Code()
-				errorMessage := st.Message()
-				return nil, fmt.Errorf("failed to search aspect types with error code: %q message: %s", errorCode.String(), errorMessage)
-			}
-			return nil, fmt.Errorf("failed to search aspect types: %w", err)
+			break
 		}

 		// Create an instance of exponential backoff with default values for retrying GetAspectType calls
@@ -225,16 +214,8 @@ func (s *Source) SearchEntries(ctx context.Context, query string, pageSize int,
 	var results []*dataplexpb.SearchEntriesResult
 	for {
 		entry, err := it.Next()
-		if err == iterator.Done {
-			break
-		}
 		if err != nil {
-			if st, ok := grpcstatus.FromError(err); ok {
-				errorCode := st.Code()
-				errorMessage := st.Message()
-				return nil, fmt.Errorf("failed to search entries with error code: %q message: %s", errorCode.String(), errorMessage)
-			}
-			return nil, fmt.Errorf("failed to search entries: %w", err)
+			break
 		}
 		results = append(results, entry)
 	}
--- a/internal/tools/cloudgda/cloudgda.go
+++ b/internal/tools/cloudgda/cloudgda.go
@@ -28,21 +28,6 @@ import (

 const resourceType string = "cloud-gemini-data-analytics-query"

-// Guidance is the tool guidance string.
-const Guidance = `Tool guidance:
-  Inputs:
-    1. query: A natural language formulation of a database query.
-  Outputs: (all optional)
-    1. disambiguation_question: Clarification questions or comments where the tool needs the users' input.
-    2. generated_query: The generated query for the user query.
-    3. intent_explanation: An explanation for why the tool produced ` + "`generated_query`" + `.
-    4. query_result: The result of executing ` + "`generated_query`" + `.
-    5. natural_language_answer: The natural language answer that summarizes the ` + "`query`" + ` and ` + "`query_result`" + `.
-
-Usage guidance:
-  1. If ` + "`disambiguation_question`" + ` is produced, then solicit the needed inputs from the user and try the tool with a new ` + "`query`" + ` that has the needed clarification.
-  2. If ` + "`natural_language_answer`" + ` is produced, use ` + "`intent_explanation`" + ` and ` + "`generated_query`" + ` to see if you need to clarify any assumptions for the user.`
-
 func init() {
 	if !tools.Register(resourceType, newConfig) {
 		panic(fmt.Sprintf("tool type %q already registered", resourceType))
@@ -83,18 +68,11 @@ func (cfg Config) ToolConfigType() string {

 func (cfg Config) Initialize(srcs map[string]sources.Source) (tools.Tool, error) {
 	// Define the parameters for the Gemini Data Analytics Query API
-	// The query is the only input parameter.
+	// The prompt is the only input parameter.
 	allParameters := parameters.Parameters{
-		parameters.NewStringParameterWithRequired("query", "A natural language formulation of a database query.", true),
+		parameters.NewStringParameterWithRequired("prompt", "The natural language question to ask.", true),
 	}
-	// The input and outputs are for tool guidance, usage guidance is for multi-turn interaction.
-	guidance := Guidance

-	if cfg.Description != "" {
-		cfg.Description += "\n\n" + guidance
-	} else {
-		cfg.Description = guidance
-	}
 	mcpManifest := tools.GetMcpManifest(cfg.Name, cfg.Description, cfg.AuthRequired, allParameters, nil)

 	return Tool{
@@ -127,9 +105,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	}

 	paramsMap := params.AsMap()
-	query, ok := paramsMap["query"].(string)
+	prompt, ok := paramsMap["prompt"].(string)
 	if !ok {
-		return nil, fmt.Errorf("query parameter not found or not a string")
+		return nil, fmt.Errorf("prompt parameter not found or not a string")
 	}

 	// Parse the access token if provided
@@ -147,7 +125,7 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para

 	payload := &QueryDataRequest{
 		Parent:            payloadParent,
-		Prompt:            query,
+		Prompt:            prompt,
 		Context:           t.Context,
 		GenerationOptions: t.GenerationOptions,
 	}
--- a/internal/tools/cloudgda/cloudgda_test.go
+++ b/internal/tools/cloudgda/cloudgda_test.go
@@ -327,9 +327,9 @@ func TestInvoke(t *testing.T) {
 		t.Fatalf("failed to initialize tool: %v", err)
 	}

-	// Prepare parameters for invocation - ONLY query
+	// Prepare parameters for invocation - ONLY prompt
 	params := parameters.ParamValues{
-		{Name: "query", Value: "How many accounts who have region in Prague are eligible for loans?"},
+		{Name: "prompt", Value: "How many accounts who have region in Prague are eligible for loans?"},
 	}

 	resourceMgr := resources.NewResourceManager(srcs, nil, nil, nil, nil, nil, nil)
--- a/internal/tools/cloudhealthcare/cloudhealthcarefhirfetchpage/cloudhealthcarefhirfetchpage.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcarefhirfetchpage/cloudhealthcarefhirfetchpage.go
@@ -103,12 +103,10 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if !ok {
 		return nil, fmt.Errorf("invalid or missing '%s' parameter; expected a string", pageURLKey)
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	return source.FHIRFetchPage(ctx, url, tokenStr)
 }
--- a/internal/tools/cloudhealthcare/cloudhealthcarefhirpatienteverything/cloudhealthcarefhirpatienteverything.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcarefhirpatienteverything/cloudhealthcarefhirpatienteverything.go
@@ -131,12 +131,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 		return nil, fmt.Errorf("invalid or missing '%s' parameter; expected a string", patientIDKey)
 	}

-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}

 	var opts []googleapi.CallOption
--- a/internal/tools/cloudhealthcare/cloudhealthcarefhirpatientsearch/cloudhealthcarefhirpatientsearch.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcarefhirpatientsearch/cloudhealthcarefhirpatientsearch.go
@@ -161,12 +161,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 		return nil, err
 	}

-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}

 	var summary bool
--- a/internal/tools/cloudhealthcare/cloudhealthcaregetdataset/cloudhealthcaregetdataset.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcaregetdataset/cloudhealthcaregetdataset.go
@@ -95,12 +95,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	return source.GetDataset(tokenStr)
 }
--- a/internal/tools/cloudhealthcare/cloudhealthcaregetdicomstore/cloudhealthcaregetdicomstore.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcaregetdicomstore/cloudhealthcaregetdicomstore.go
@@ -116,12 +116,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	return source.GetDICOMStore(storeID, tokenStr)
 }
--- a/internal/tools/cloudhealthcare/cloudhealthcaregetdicomstoremetrics/cloudhealthcaregetdicomstoremetrics.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcaregetdicomstoremetrics/cloudhealthcaregetdicomstoremetrics.go
@@ -116,12 +116,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	return source.GetDICOMStoreMetrics(storeID, tokenStr)
 }
--- a/internal/tools/cloudhealthcare/cloudhealthcaregetfhirresource/cloudhealthcaregetfhirresource.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcaregetfhirresource/cloudhealthcaregetfhirresource.go
@@ -130,12 +130,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if !ok {
 		return nil, fmt.Errorf("invalid or missing '%s' parameter; expected a string", idKey)
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	return source.GetFHIRResource(storeID, resType, resID, tokenStr)
 }
--- a/internal/tools/cloudhealthcare/cloudhealthcaregetfhirstore/cloudhealthcaregetfhirstore.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcaregetfhirstore/cloudhealthcaregetfhirstore.go
@@ -116,12 +116,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	return source.GetFHIRStore(storeID, tokenStr)
 }
--- a/internal/tools/cloudhealthcare/cloudhealthcaregetfhirstoremetrics/cloudhealthcaregetfhirstoremetrics.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcaregetfhirstoremetrics/cloudhealthcaregetfhirstoremetrics.go
@@ -116,12 +116,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	return source.GetFHIRStoreMetrics(storeID, tokenStr)
 }
--- a/internal/tools/cloudhealthcare/cloudhealthcarelistdicomstores/cloudhealthcarelistdicomstores.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcarelistdicomstores/cloudhealthcarelistdicomstores.go
@@ -95,12 +95,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	return source.ListDICOMStores(tokenStr)
 }
--- a/internal/tools/cloudhealthcare/cloudhealthcarelistfhirstores/cloudhealthcarelistfhirstores.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcarelistfhirstores/cloudhealthcarelistfhirstores.go
@@ -95,12 +95,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	return source.ListFHIRStores(tokenStr)
 }
--- a/internal/tools/cloudhealthcare/cloudhealthcareretrieverendereddicominstance/cloudhealthcareretrieverendereddicominstance.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcareretrieverendereddicominstance/cloudhealthcareretrieverendereddicominstance.go
@@ -127,12 +127,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	study, ok := params.AsMap()[studyInstanceUIDKey].(string)
 	if !ok {
--- a/internal/tools/cloudhealthcare/cloudhealthcaresearchdicominstances/cloudhealthcaresearchdicominstances.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcaresearchdicominstances/cloudhealthcaresearchdicominstances.go
@@ -140,12 +140,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}

 	opts, err := common.ParseDICOMSearchParameters(params, []string{sopInstanceUIDKey, patientNameKey, patientIDKey, accessionNumberKey, referringPhysicianNameKey, studyDateKey, modalityKey})
--- a/internal/tools/cloudhealthcare/cloudhealthcaresearchdicomseries/cloudhealthcaresearchdicomseries.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcaresearchdicomseries/cloudhealthcaresearchdicomseries.go
@@ -138,12 +138,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}

 	opts, err := common.ParseDICOMSearchParameters(params, []string{seriesInstanceUIDKey, patientNameKey, patientIDKey, accessionNumberKey, referringPhysicianNameKey, studyDateKey, modalityKey})
--- a/internal/tools/cloudhealthcare/cloudhealthcaresearchdicomstudies/cloudhealthcaresearchdicomstudies.go
+++ b/internal/tools/cloudhealthcare/cloudhealthcaresearchdicomstudies/cloudhealthcaresearchdicomstudies.go
@@ -133,12 +133,9 @@ func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, para
 	if err != nil {
 		return nil, err
 	}
-	var tokenStr string
-	if source.UseClientAuthorization() {
-		tokenStr, err = accessToken.ParseBearerToken()
-		if err != nil {
-			return nil, fmt.Errorf("error parsing access token: %w", err)
-		}
+	tokenStr, err := accessToken.ParseBearerToken()
+	if err != nil {
+		return nil, fmt.Errorf("error parsing access token: %w", err)
 	}
 	opts, err := common.ParseDICOMSearchParameters(params, []string{studyInstanceUIDKey, patientNameKey, patientIDKey, accessionNumberKey, referringPhysicianNameKey, studyDateKey})
 	if err != nil {
--- a/internal/tools/cloudsql/cloudsqlrestorebackup/cloudsqlrestorebackup.go
+++ b/internal/tools/cloudsql/cloudsqlrestorebackup/cloudsqlrestorebackup.go
@@ -1,183 +0,0 @@
-// Copyright 2026 Google LLC
-//
-// Licensed under the Apache License, Version 2.0 (the "License");
-// you may not use this file except in compliance with the License.
-// You may obtain a copy of the License at
-//
-//      http://www.apache.org/licenses/LICENSE-2.0
-//
-// Unless required by applicable law or agreed to in writing, software
-// distributed under the License is distributed on an "AS IS" BASIS,
-// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-// See the License for the specific language governing permissions and
-// limitations under the License.
-
-package cloudsqlrestorebackup
-
-import (
-	"context"
-	"fmt"
-
-	"github.com/goccy/go-yaml"
-	"github.com/googleapis/genai-toolbox/internal/embeddingmodels"
-	"github.com/googleapis/genai-toolbox/internal/sources"
-	"github.com/googleapis/genai-toolbox/internal/tools"
-	"github.com/googleapis/genai-toolbox/internal/util/parameters"
-	"google.golang.org/api/sqladmin/v1"
-)
-
-const resourceType string = "cloud-sql-restore-backup"
-
-var _ tools.ToolConfig = Config{}
-
-type compatibleSource interface {
-	GetDefaultProject() string
-	GetService(context.Context, string) (*sqladmin.Service, error)
-	UseClientAuthorization() bool
-	RestoreBackup(ctx context.Context, targetProject, targetInstance, sourceProject, sourceInstance, backupID, accessToken string) (any, error)
-}
-
-// Config defines the configuration for the restore-backup tool.
-type Config struct {
-	Name         string   `yaml:"name" validate:"required"`
-	Type         string   `yaml:"type" validate:"required"`
-	Description  string   `yaml:"description"`
-	Source       string   `yaml:"source" validate:"required"`
-	AuthRequired []string `yaml:"authRequired"`
-}
-
-func init() {
-	if !tools.Register(resourceType, newConfig) {
-		panic(fmt.Sprintf("tool type %q already registered", resourceType))
-	}
-}
-
-func newConfig(ctx context.Context, name string, decoder *yaml.Decoder) (tools.ToolConfig, error) {
-	actual := Config{Name: name}
-	if err := decoder.DecodeContext(ctx, &actual); err != nil {
-		return nil, err
-	}
-	return actual, nil
-}
-
-// ToolConfigType returns the type of the tool.
-func (cfg Config) ToolConfigType() string {
-	return resourceType
-}
-
-// Initialize initializes the tool from the configuration.
-func (cfg Config) Initialize(srcs map[string]sources.Source) (tools.Tool, error) {
-	rawS, ok := srcs[cfg.Source]
-	if !ok {
-		return nil, fmt.Errorf("no source named %q configured", cfg.Source)
-	}
-	s, ok := rawS.(compatibleSource)
-	if !ok {
-		return nil, fmt.Errorf("invalid source for %q tool: source %q not compatible", resourceType, cfg.Source)
-	}
-
-	project := s.GetDefaultProject()
-	var targetProjectParam parameters.Parameter
-	if project != "" {
-		targetProjectParam = parameters.NewStringParameterWithDefault("target_project", project, "The GCP project ID. This is pre-configured; do not ask for it unless the user explicitly provides a different one.")
-	} else {
-		targetProjectParam = parameters.NewStringParameter("target_project", "The project ID")
-	}
-
-	allParameters := parameters.Parameters{
-		targetProjectParam,
-		parameters.NewStringParameter("target_instance", "Cloud SQL instance ID of the target instance. This does not include the project ID."),
-		parameters.NewStringParameter("backup_id", "Identifier of the backup being restored. Can be a BackupRun ID, backup name, or BackupDR backup name. Use the full backup ID as provided, do not try to parse it"),
-		parameters.NewStringParameterWithRequired("source_project", "GCP project ID of the instance that the backup belongs to. Only required if the backup_id is a BackupRun ID.", false),
-		parameters.NewStringParameterWithRequired("source_instance", "Cloud SQL instance ID of the instance that the backup belongs to. Only required if the backup_id is a BackupRun ID.", false),
-	}
-	paramManifest := allParameters.Manifest()
-
-	description := cfg.Description
-	if description == "" {
-		description = "Restores a backup on a Cloud SQL instance."
-	}
-
-	mcpManifest := tools.GetMcpManifest(cfg.Name, description, cfg.AuthRequired, allParameters, nil)
-
-	return Tool{
-		Config:      cfg,
-		AllParams:   allParameters,
-		manifest:    tools.Manifest{Description: description, Parameters: paramManifest, AuthRequired: cfg.AuthRequired},
-		mcpManifest: mcpManifest,
-	}, nil
-}
-
-// Tool represents the restore-backup tool.
-type Tool struct {
-	Config
-	AllParams   parameters.Parameters `yaml:"allParams"`
-	manifest    tools.Manifest
-	mcpManifest tools.McpManifest
-}
-
-func (t Tool) ToConfig() tools.ToolConfig {
-	return t.Config
-}
-
-func (t Tool) Invoke(ctx context.Context, resourceMgr tools.SourceProvider, params parameters.ParamValues, accessToken tools.AccessToken) (any, error) {
-	source, err := tools.GetCompatibleSource[compatibleSource](resourceMgr, t.Source, t.Name, t.Type)
-	if err != nil {
-		return nil, err
-	}
-	paramsMap := params.AsMap()
-
-	targetProject, ok := paramsMap["target_project"].(string)
-	if !ok {
-		return nil, fmt.Errorf("error casting 'target_project' parameter: %v", paramsMap["target_project"])
-	}
-	targetInstance, ok := paramsMap["target_instance"].(string)
-	if !ok {
-		return nil, fmt.Errorf("error casting 'target_instance' parameter: %v", paramsMap["target_instance"])
-	}
-	backupID, ok := paramsMap["backup_id"].(string)
-	if !ok {
-		return nil, fmt.Errorf("error casting 'backup_id' parameter: %v", paramsMap["backup_id"])
-	}
-	sourceProject, _ := paramsMap["source_project"].(string)
-	sourceInstance, _ := paramsMap["source_instance"].(string)
-
-	return source.RestoreBackup(ctx, targetProject, targetInstance, sourceProject, sourceInstance, backupID, string(accessToken))
-}
-
-// ParseParams parses the parameters for the tool.
-func (t Tool) ParseParams(data map[string]any, claims map[string]map[string]any) (parameters.ParamValues, error) {
-	return parameters.ParseParams(t.AllParams, data, claims)
-}
-
-func (t Tool) EmbedParams(ctx context.Context, paramValues parameters.ParamValues, embeddingModelsMap map[string]embeddingmodels.EmbeddingModel) (parameters.ParamValues, error) {
-	return parameters.EmbedParams(ctx, t.AllParams, paramValues, embeddingModelsMap, nil)
-}
-
-// Manifest returns the tool's manifest.
-func (t Tool) Manifest() tools.Manifest {
-	return t.manifest
-}
-
-// McpManifest returns the tool's MCP manifest.
-func (t Tool) McpManifest() tools.McpManifest {
-	return t.mcpManifest
-}
-
-// Authorized checks if the tool is authorized.
-func (t Tool) Authorized(verifiedAuthServices []string) bool {
-	return true
-}
-
-func (t Tool) RequiresClientAuthorization(resourceMgr tools.SourceProvider) (bool, error) {
-	source, err := tools.GetCompatibleSource[compatibleSource](resourceMgr, t.Source, t.Name, t.Type)
-	if err != nil {
-		return false, err
-	}
-
-	return source.UseClientAuthorization(), nil
-}
-
-func (t Tool) GetAuthTokenHeaderName(resourceMgr tools.SourceProvider) (string, error) {
-	return "Authorization", nil
-}
--- a/internal/tools/cloudsql/cloudsqlrestorebackup/cloudsqlrestorebackup_test.go
+++ b/internal/tools/cloudsql/cloudsqlrestorebackup/cloudsqlrestorebackup_test.go
@@ -1,67 +0,0 @@
-// Copyright 2026 Google LLC
-//
-// Licensed under the Apache License, Version 2.0 (the "License");
-// you may not use this file except in compliance with the License.
-// You may obtain a copy of the License at
-//
-//      http://www.apache.org/licenses/LICENSE-2.0
-//
-// Unless required by applicable law or agreed to in writing, software
-// distributed under the License is distributed on an "AS IS" BASIS,
-// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-// See the License for the specific language governing permissions and
-// limitations under the License.
-
-package cloudsqlrestorebackup_test
-
-import (
-	"testing"
-
-	"github.com/google/go-cmp/cmp"
-	"github.com/googleapis/genai-toolbox/internal/server"
-	"github.com/googleapis/genai-toolbox/internal/testutils"
-	"github.com/googleapis/genai-toolbox/internal/tools/cloudsql/cloudsqlrestorebackup"
-)
-
-func TestParseFromYaml(t *testing.T) {
-	ctx, err := testutils.ContextWithNewLogger()
-	if err != nil {
-		t.Fatalf("unexpected error: %s", err)
-	}
-	tcs := []struct {
-		desc string
-		in   string
-		want server.ToolConfigs
-	}{
-		{
-			desc: "basic example",
-			in: `
-			kind: tools
-			name: restore-backup-tool
-			type: cloud-sql-restore-backup
-			description: a test description
-			source: a-source
-			`,
-			want: server.ToolConfigs{
-				"restore-backup-tool": cloudsqlrestorebackup.Config{
-					Name:         "restore-backup-tool",
-					Type:         "cloud-sql-restore-backup",
-					Description:  "a test description",
-					Source:       "a-source",
-					AuthRequired: []string{},
-				},
-			},
-		},
-	}
-	for _, tc := range tcs {
-		t.Run(tc.desc, func(t *testing.T) {
-			_, _, _, got, _, _, err := server.UnmarshalResourceConfig(ctx, testutils.FormatYaml(tc.in))
-			if err != nil {
-				t.Fatalf("unable to unmarshal: %s", err)
-			}
-			if diff := cmp.Diff(tc.want, got); diff != "" {
-				t.Fatalf("incorrect parse: diff %v", diff)
-			}
-		})
-	}
-}
--- a/internal/util/parameters/parameters.go
+++ b/internal/util/parameters/parameters.go
@@ -134,12 +134,7 @@ func ParseParams(ps Parameters, data map[string]any, claimsMap map[string]map[st
 		var err error
 		paramAuthServices := p.GetAuthServices()
 		name := p.GetName()
-
-		sourceParamName := p.GetValueFromParam()
-		if sourceParamName != "" {
-			v = data[sourceParamName]
-
-		} else if len(paramAuthServices) == 0 {
+		if len(paramAuthServices) == 0 {
 			// parse non auth-required parameter
 			var ok bool
 			v, ok = data[name]
@@ -323,7 +318,6 @@ type Parameter interface {
 	GetRequired() bool
 	GetAuthServices() []ParamAuthService
 	GetEmbeddedBy() string
-	GetValueFromParam() string
 	Parse(any) (any, error)
 	Manifest() ParameterManifest
 	McpManifest() (ParameterMcpManifest, []string)
@@ -471,9 +465,6 @@ func ParseParameter(ctx context.Context, p map[string]any, paramType string) (Pa
 func (ps Parameters) Manifest() []ParameterManifest {
 	rtn := make([]ParameterManifest, 0, len(ps))
 	for _, p := range ps {
-		if p.GetValueFromParam() != "" {
-			continue
-		}
 		rtn = append(rtn, p.Manifest())
 	}
 	return rtn
@@ -485,11 +476,6 @@ func (ps Parameters) McpManifest() (McpToolsSchema, map[string][]string) {
 	authParam := make(map[string][]string)

 	for _, p := range ps {
-		// If the parameter is sourced from another param, skip it in the MCP manifest
-		if p.GetValueFromParam() != "" {
-			continue
-		}
-
 		name := p.GetName()
 		paramManifest, authParamList := p.McpManifest()
 		defaultV := p.GetDefault()
@@ -523,7 +509,6 @@ type ParameterManifest struct {
 	Default              any                `json:"default,omitempty"`
 	AdditionalProperties any                `json:"additionalProperties,omitempty"`
 	EmbeddedBy           string             `json:"embeddedBy,omitempty"`
-	ValueFromParam       string             `json:"valueFromParam,omitempty"`
 }

 // ParameterMcpManifest represents properties when served as part of a ToolMcpManifest.
@@ -546,7 +531,6 @@ type CommonParameter struct {
 	AuthServices   []ParamAuthService `yaml:"authServices"`
 	AuthSources    []ParamAuthService `yaml:"authSources"` // Deprecated: Kept for compatibility.
 	EmbeddedBy     string             `yaml:"embeddedBy"`
-	ValueFromParam string             `yaml:"valueFromParam"`
 }

 // GetName returns the name specified for the Parameter.
@@ -604,16 +588,10 @@ func (p *CommonParameter) IsExcludedValues(v any) bool {
 	return false
 }

-// GetEmbeddedBy returns the embedding model name for the Parameter.
 func (p *CommonParameter) GetEmbeddedBy() string {
 	return p.EmbeddedBy
 }

-// GetValueFromParam returns the param value to copy from.
-func (p *CommonParameter) GetValueFromParam() string {
-	return p.ValueFromParam
-}
-
 // MatchStringOrRegex checks if the input matches the target
 func MatchStringOrRegex(input, target any) bool {
 	targetS, ok := target.(string)
--- a/server.json
+++ b/server.json
@@ -2,7 +2,7 @@
    "$schema": "https://static.modelcontextprotocol.io/schemas/2025-12-11/server.schema.json",
    "name": "io.github.googleapis/genai-toolbox",
    "description": "MCP Toolbox for Databases enables your agent to connect to your database.",
-    "title": "MCP Toolbox for Databases",
+    "title": "MCP Toolbox",
    "websiteUrl": "https://github.com/googleapis/genai-toolbox",
    "icons": [
        {
@@ -14,11 +14,11 @@
        "url": "https://github.com/googleapis/genai-toolbox",
        "source": "github"
    },
-    "version": "0.26.0",
+    "version": "0.25.0",
    "packages": [
        {
            "registryType": "oci",
-            "identifier": "us-central1-docker.pkg.dev/database-toolbox/toolbox/toolbox:0.26.0",
+            "identifier": "us-central1-docker.pkg.dev/database-toolbox/toolbox/toolbox:0.25.0",
            "transport": {
                "type": "streamable-http",
                "url": "http://{host}:{port}/mcp"
@@ -31,18 +31,6 @@
                    "default": "tools.yaml",
                    "isRequired": false
                },
-                {
-                    "type": "named",
-                    "name": "--tools-files",
-                    "description": "Multiple file paths specifying tool configurations. Files will be merged. Cannot be used with –-tools-file or –-tools-folder.",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--tools-folder",
-                    "description": "Directory path containing YAML tool configuration files. All .yaml and .yml files in the directory will be loaded and merged. Cannot be used with –-tools-file or –-tools-files.",
-                    "isRequired": false
-                },
                {
                    "type": "named",
                    "name": "--address",
@@ -82,82 +70,6 @@
                        "warn",
                        "error"
                    ]
-                },
-                {
-                    "type": "named",
-                    "name": "--logging-format",
-                    "description": "Specify logging format to use.",
-                    "default": "standard",
-                    "choices": [
-                        "standard",
-                        "json"
-                    ]
-                },
-                {
-                    "type": "named",
-                    "name": "--disable-reload",
-                    "description": "Disables dynamic reloading of tools file.",
-                    "format": "boolean",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--prebuilt",
-                    "description": "Use a prebuilt tool configuration by source type.",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--stdio",
-                    "description": "Listens via MCP STDIO instead of acting as a remote HTTP server.",
-                    "format": "boolean",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--telemetry-gcp",
-                    "description": "Enable exporting directly to Google Cloud Monitoring.",
-                    "format": "boolean",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--telemetry-otlp",
-                    "description": "Enable exporting using OpenTelemetry Protocol (OTLP) to the specified endpoint (e.g. 'http://127.0.0.1:4318').",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--telemetry-service-name",
-                    "description": "Sets the value of the service.name resource attribute for telemetry data.",
-                    "default": "toolbox",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--ui",
-                    "description": "Launches the Toolbox UI web server.",
-                    "format": "boolean",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--allowed-origins",
-                    "description": "Specifies a list of origins permitted to access this server.",
-                    "default": "*",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--help",
-                    "description": "Show help for toolbox",
-                    "isRequired": false
-                },
-                {
-                    "type": "named",
-                    "name": "--version",
-                    "description": "Show version for toolbox",
-                    "isRequired": false
                }
            ]
        }
--- a/tests/alloydbpg/alloydb_pg_integration_test.go
+++ b/tests/alloydbpg/alloydb_pg_integration_test.go
@@ -147,20 +147,12 @@ func TestAlloyDBPgToolEndpoints(t *testing.T) {
 	teardownTable2 := tests.SetupPostgresSQLTable(t, ctx, pool, createAuthTableStmt, insertAuthTableStmt, tableNameAuth, authTestParams)
 	defer teardownTable2(t)

-	// Set up table for semanti search
-	vectorTableName, tearDownVectorTable := tests.SetupPostgresVectorTable(t, ctx, pool)
-	defer tearDownVectorTable(t)
-
 	// Write config into a file and pass it to command
 	toolsFile := tests.GetToolsConfig(sourceConfig, AlloyDBPostgresToolType, paramToolStmt, idParamToolStmt, nameParamToolStmt, arrayToolStmt, authToolStmt)
 	toolsFile = tests.AddExecuteSqlConfig(t, toolsFile, "postgres-execute-sql")
 	tmplSelectCombined, tmplSelectFilterCombined := tests.GetPostgresSQLTmplToolStatement()
 	toolsFile = tests.AddTemplateParamConfig(t, toolsFile, AlloyDBPostgresToolType, tmplSelectCombined, tmplSelectFilterCombined, "")

-	// Add semantic search tool config
-	insertStmt, searchStmt := tests.GetPostgresVectorSearchStmts(vectorTableName)
-	toolsFile = tests.AddSemanticSearchConfig(t, toolsFile, AlloyDBPostgresToolType, insertStmt, searchStmt)
-
 	toolsFile = tests.AddPostgresPrebuiltConfig(t, toolsFile)

 	cmd, cleanup, err := tests.StartCmd(ctx, toolsFile, args...)
--- a/tests/cloudgda/cloud_gda_integration_test.go
+++ b/tests/cloudgda/cloud_gda_integration_test.go
@@ -139,12 +139,12 @@ func TestCloudGdaToolEndpoints(t *testing.T) {
 	// 1. RunToolGetTestByName
 	expectedManifest := map[string]any{
 		toolName: map[string]any{
-			"description": "Test GDA Tool\n\n" + cloudgda.Guidance,
+			"description": "Test GDA Tool",
 			"parameters": []any{
 				map[string]any{
-					"name":        "query",
+					"name":        "prompt",
 					"type":        "string",
-					"description": "A natural language formulation of a database query.",
+					"description": "The natural language question to ask.",
 					"required":    true,
 					"authSources": []any{},
 				},
@@ -155,7 +155,7 @@ func TestCloudGdaToolEndpoints(t *testing.T) {
 	tests.RunToolGetTestByName(t, toolName, expectedManifest)

 	// 2. RunToolInvokeParametersTest
-	params := []byte(`{"query": "test question"}`)
+	params := []byte(`{"prompt": "test question"}`)
 	tests.RunToolInvokeParametersTest(t, toolName, params, "\"queryResult\":\"SELECT * FROM table;\"")

 	// 3. Manual MCP Tool Call Test
@@ -172,7 +172,7 @@ func TestCloudGdaToolEndpoints(t *testing.T) {
 		Params: map[string]any{
 			"name": toolName,
 			"arguments": map[string]any{
-				"query": "test question",
+				"prompt": "test question",
 			},
 		},
 	}
--- a/tests/cloudhealthcare/cloud_healthcare_integration_test.go
+++ b/tests/cloudhealthcare/cloud_healthcare_integration_test.go
@@ -112,7 +112,8 @@ func TestHealthcareToolEndpoints(t *testing.T) {
 	fhirStoreID := "fhir-store-" + uuid.New().String()
 	dicomStoreID := "dicom-store-" + uuid.New().String()

-	patient1ID, patient2ID := setupHealthcareResources(t, healthcareService, healthcareDataset, fhirStoreID, dicomStoreID)
+	patient1ID, patient2ID, teardown := setupHealthcareResources(t, healthcareService, healthcareDataset, fhirStoreID, dicomStoreID)
+	defer teardown(t)

 	toolsFile := getToolsConfig(sourceConfig)
 	toolsFile = addClientAuthSourceConfig(t, toolsFile)
@@ -172,8 +173,10 @@ func TestHealthcareToolWithStoreRestriction(t *testing.T) {
 	disallowedFHIRStoreID := "fhir-store-disallowed-" + uuid.New().String()
 	disallowedDICOMStoreID := "dicom-store-disallowed-" + uuid.New().String()

-	setupHealthcareResources(t, healthcareService, healthcareDataset, allowedFHIRStoreID, allowedDICOMStoreID)
-	setupHealthcareResources(t, healthcareService, healthcareDataset, disallowedFHIRStoreID, disallowedDICOMStoreID)
+	_, _, teardownAllowedStores := setupHealthcareResources(t, healthcareService, healthcareDataset, allowedFHIRStoreID, allowedDICOMStoreID)
+	defer teardownAllowedStores(t)
+	_, _, teardownDisallowedStores := setupHealthcareResources(t, healthcareService, healthcareDataset, disallowedFHIRStoreID, disallowedDICOMStoreID)
+	defer teardownDisallowedStores(t)

 	// Configure source with dataset restriction.
 	sourceConfig["allowedFhirStores"] = []string{allowedFHIRStoreID}
@@ -254,7 +257,7 @@ func newHealthcareService(ctx context.Context) (*healthcare.Service, error) {
 	return healthcareService, nil
 }

-func setupHealthcareResources(t *testing.T, service *healthcare.Service, datasetID, fhirStoreID, dicomStoreID string) (string, string) {
+func setupHealthcareResources(t *testing.T, service *healthcare.Service, datasetID, fhirStoreID, dicomStoreID string) (string, string, func(*testing.T)) {
 	datasetName := fmt.Sprintf("projects/%s/locations/%s/datasets/%s", healthcareProject, healthcareRegion, datasetID)
 	var err error

@@ -263,24 +266,12 @@ func setupHealthcareResources(t *testing.T, service *healthcare.Service, dataset
 	if fhirStore, err = service.Projects.Locations.Datasets.FhirStores.Create(datasetName, fhirStore).FhirStoreId(fhirStoreID).Do(); err != nil {
 		t.Fatalf("failed to create fhir store: %v", err)
 	}
-	// Register cleanup
-	t.Cleanup(func() {
-		if _, err := service.Projects.Locations.Datasets.FhirStores.Delete(fhirStore.Name).Do(); err != nil {
-			t.Logf("failed to delete fhir store: %v", err)
-		}
-	})

 	// Create DICOM store
 	dicomStore := &healthcare.DicomStore{}
 	if dicomStore, err = service.Projects.Locations.Datasets.DicomStores.Create(datasetName, dicomStore).DicomStoreId(dicomStoreID).Do(); err != nil {
 		t.Fatalf("failed to create dicom store: %v", err)
 	}
-	// Register cleanup
-	t.Cleanup(func() {
-		if _, err := service.Projects.Locations.Datasets.DicomStores.Delete(dicomStore.Name).Do(); err != nil {
-			t.Logf("failed to delete dicom store: %v", err)
-		}
-	})

 	// Create Patient 1
 	patient1Body := bytes.NewBuffer([]byte(`{
@@ -326,7 +317,15 @@ func setupHealthcareResources(t *testing.T, service *healthcare.Service, dataset
 		createFHIRResource(t, service, fhirStore.Name, "Observation", observation2Body)
 	}

-	return patient1ID, patient2ID
+	teardown := func(t *testing.T) {
+		if _, err := service.Projects.Locations.Datasets.FhirStores.Delete(fhirStore.Name).Do(); err != nil {
+			t.Logf("failed to delete fhir store: %v", err)
+		}
+		if _, err := service.Projects.Locations.Datasets.DicomStores.Delete(dicomStore.Name).Do(); err != nil {
+			t.Logf("failed to delete dicom store: %v", err)
+		}
+	}
+	return patient1ID, patient2ID, teardown
 }

 func getToolsConfig(sourceConfig map[string]any) map[string]any {
--- a/tests/cloudsql/cloud_sql_get_instances_test.go
+++ b/tests/cloudsql/cloud_sql_get_instances_test.go
@@ -53,7 +53,7 @@ func (t *getInstancesTransport) RoundTrip(req *http.Request) (*http.Response, er

 type instance struct {
 	Name string `json:"name"`
-	Kind string `json:"kind"`
+	Type string `json:"type"`
 }

 type handler struct {
@@ -95,7 +95,7 @@ func (h *handler) ServeHTTP(w http.ResponseWriter, r *http.Request) {
 func TestGetInstancesToolEndpoints(t *testing.T) {
 	h := &handler{
 		instances: map[string]*instance{
-			"instance-1": {Name: "instance-1", Kind: "sql#instance"},
+			"instance-1": {Name: "instance-1", Type: "sql#instance"},
 		},
 		t: t,
 	}
@@ -151,7 +151,7 @@ func TestGetInstancesToolEndpoints(t *testing.T) {
 			name:     "successful get instance",
 			toolName: "get-instance-1",
 			body:     `{"projectId": "p1", "instanceId": "instance-1"}`,
-			want:     `{"name":"instance-1","kind":"sql#instance"}`,
+			want:     `{"name":"instance-1","type":"sql#instance"}`,
 		},
 		{
 			name:        "failed get instance",
--- a/tests/cloudsql/cloud_sql_restore_backup_test.go
+++ b/tests/cloudsql/cloud_sql_restore_backup_test.go
@@ -1,267 +0,0 @@
-// Copyright 2026 Google LLC
-//
-// Licensed under the Apache License, Version 2.0 (the "License");
-// you may not use this file except in compliance with the License.
-// You may obtain a copy of the License at
-//
-//      http://www.apache.org/licenses/LICENSE-2.0
-//
-// Unless required by applicable law or agreed to in writing, software
-// distributed under the License is distributed on an "AS IS" BASIS,
-// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-// See the License for the specific language governing permissions and
-// limitations under the License.
-
-package cloudsql
-
-import (
-	"bytes"
-	"context"
-	"encoding/json"
-	"fmt"
-	"io"
-	"net/http"
-	"net/http/httptest"
-	"net/url"
-	"reflect"
-	"regexp"
-	"strings"
-	"testing"
-	"time"
-
-	"github.com/google/go-cmp/cmp"
-	"github.com/googleapis/genai-toolbox/internal/testutils"
-	"github.com/googleapis/genai-toolbox/tests"
-	"google.golang.org/api/sqladmin/v1"
-)
-
-var (
-	restoreBackupToolKind = "cloud-sql-restore-backup"
-)
-
-type restoreBackupTransport struct {
-	transport http.RoundTripper
-	url       *url.URL
-}
-
-func (t *restoreBackupTransport) RoundTrip(req *http.Request) (*http.Response, error) {
-	if strings.HasPrefix(req.URL.String(), "https://sqladmin.googleapis.com") {
-		req.URL.Scheme = t.url.Scheme
-		req.URL.Host = t.url.Host
-	}
-	return t.transport.RoundTrip(req)
-}
-
-type masterRestoreBackupHandler struct {
-	t *testing.T
-}
-
-func (h *masterRestoreBackupHandler) ServeHTTP(w http.ResponseWriter, r *http.Request) {
-	if !strings.Contains(r.UserAgent(), "genai-toolbox/") {
-		h.t.Errorf("User-Agent header not found")
-	}
-	var body sqladmin.InstancesRestoreBackupRequest
-	if err := json.NewDecoder(r.Body).Decode(&body); err != nil {
-		h.t.Fatalf("failed to decode request body: %v", err)
-	} else {
-		h.t.Logf("Received request body: %+v", body)
-	}
-
-	var expectedBody sqladmin.InstancesRestoreBackupRequest
-	var response any
-	var statusCode int
-
-	switch {
-	case body.Backup != "":
-		expectedBody = sqladmin.InstancesRestoreBackupRequest{
-			Backup: "projects/p1/backups/test-uid",
-		}
-		response = map[string]any{"name": "op1", "status": "PENDING"}
-		statusCode = http.StatusOK
-	case body.BackupdrBackup != "":
-		expectedBody = sqladmin.InstancesRestoreBackupRequest{
-			BackupdrBackup: "projects/p1/locations/us-central1/backupVaults/test-vault/dataSources/test-ds/backups/test-uid",
-		}
-		response = map[string]any{"name": "op1", "status": "PENDING"}
-		statusCode = http.StatusOK
-	case body.RestoreBackupContext != nil:
-		expectedBody = sqladmin.InstancesRestoreBackupRequest{
-			RestoreBackupContext: &sqladmin.RestoreBackupContext{
-				Project:     "p1",
-				InstanceId:  "source",
-				BackupRunId: 12345,
-			},
-		}
-		response = map[string]any{"name": "op1", "status": "PENDING"}
-		statusCode = http.StatusOK
-	default:
-		http.Error(w, fmt.Sprintf("unhandled restore request body: %v", body), http.StatusInternalServerError)
-		return
-	}
-
-	if diff := cmp.Diff(expectedBody, body); diff != "" {
-		h.t.Errorf("unexpected request body (-want +got):\n%s", diff)
-	}
-
-	w.Header().Set("Content-Type", "application/json")
-	w.WriteHeader(statusCode)
-	if err := json.NewEncoder(w).Encode(response); err != nil {
-		http.Error(w, err.Error(), http.StatusInternalServerError)
-	}
-}
-
-func TestRestoreBackupToolEndpoints(t *testing.T) {
-	ctx, cancel := context.WithTimeout(context.Background(), time.Minute)
-	defer cancel()
-
-	handler := &masterRestoreBackupHandler{t: t}
-	server := httptest.NewServer(handler)
-	defer server.Close()
-
-	serverURL, err := url.Parse(server.URL)
-	if err != nil {
-		t.Fatalf("failed to parse server URL: %v", err)
-	}
-
-	originalTransport := http.DefaultClient.Transport
-	if originalTransport == nil {
-		originalTransport = http.DefaultTransport
-	}
-	http.DefaultClient.Transport = &restoreBackupTransport{
-		transport: originalTransport,
-		url:       serverURL,
-	}
-	t.Cleanup(func() {
-		http.DefaultClient.Transport = originalTransport
-	})
-
-	var args []string
-	toolsFile := getRestoreBackupToolsConfig()
-	cmd, cleanup, err := tests.StartCmd(ctx, toolsFile, args...)
-	if err != nil {
-		t.Fatalf("command initialization returned an error: %s", err)
-	}
-	defer cleanup()
-
-	waitCtx, cancel := context.WithTimeout(ctx, 30*time.Second)
-	defer cancel()
-	out, err := testutils.WaitForString(waitCtx, regexp.MustCompile(`Server ready to serve`), cmd.Out)
-	if err != nil {
-		t.Logf("toolbox command logs: \n%s", out)
-		t.Fatalf("toolbox didn't start successfully: %s", err)
-	}
-
-	tcs := []struct {
-		name        string
-		toolName    string
-		body        string
-		want        string
-		expectError bool
-		errorStatus int
-	}{
-		{
-			name:     "successful restore with standard backup",
-			toolName: "restore-backup",
-			body:     `{"target_project": "p1", "target_instance": "instance-standard", "backup_id": "12345", "source_project": "p1", "source_instance": "source"}`,
-			want:     `{"name":"op1","status":"PENDING"}`,
-		},
-		{
-			name:     "successful restore with project level backup",
-			toolName: "restore-backup",
-			body:     `{"target_project": "p1", "target_instance": "instance-project-level", "backup_id": "projects/p1/backups/test-uid"}`,
-			want:     `{"name":"op1","status":"PENDING"}`,
-		},
-		{
-			name:     "successful restore with BackupDR backup",
-			toolName: "restore-backup",
-			body:     `{"target_project": "p1", "target_instance": "instance-project-level", "backup_id": "projects/p1/locations/us-central1/backupVaults/test-vault/dataSources/test-ds/backups/test-uid"}`,
-			want:     `{"name":"op1","status":"PENDING"}`,
-		},
-		{
-			name:        "missing source instance info for standard backup",
-			toolName:    "restore-backup",
-			body:        `{"target_project": "p1", "target_instance": "instance-project-level", "backup_id": "12345"}`,
-			expectError: true,
-			errorStatus: http.StatusBadRequest,
-		},
-		{
-			name:        "missing backup identifier",
-			toolName:    "restore-backup",
-			body:        `{"target_project": "p1", "target_instance": "instance-project-level"}`,
-			expectError: true,
-			errorStatus: http.StatusBadRequest,
-		},
-		{
-			name:        "missing target instance info",
-			toolName:    "restore-backup",
-			body:        `{"backup_id": "12345"}`,
-			expectError: true,
-			errorStatus: http.StatusBadRequest,
-		},
-	}
-
-	for _, tc := range tcs {
-		tc := tc
-		t.Run(tc.name, func(t *testing.T) {
-			api := fmt.Sprintf("http://127.0.0.1:5000/api/tool/%s/invoke", tc.toolName)
-			req, err := http.NewRequest(http.MethodPost, api, bytes.NewBufferString(tc.body))
-			if err != nil {
-				t.Fatalf("unable to create request: %s", err)
-			}
-			req.Header.Add("Content-type", "application/json")
-			resp, err := http.DefaultClient.Do(req)
-			if err != nil {
-				t.Fatalf("unable to send request: %s", err)
-			}
-			defer resp.Body.Close()
-
-			if tc.expectError {
-				if resp.StatusCode != tc.errorStatus {
-					bodyBytes, _ := io.ReadAll(resp.Body)
-					t.Fatalf("expected status %d but got %d: %s", tc.errorStatus, resp.StatusCode, string(bodyBytes))
-				}
-				return
-			}
-
-			if resp.StatusCode != http.StatusOK {
-				bodyBytes, _ := io.ReadAll(resp.Body)
-				t.Fatalf("response status code is not 200, got %d: %s", resp.StatusCode, string(bodyBytes))
-			}
-
-			var result struct {
-				Result string `json:"result"`
-			}
-			if err := json.NewDecoder(resp.Body).Decode(&result); err != nil {
-				t.Fatalf("failed to decode response: %v", err)
-			}
-
-			var got, want map[string]any
-			if err := json.Unmarshal([]byte(result.Result), &got); err != nil {
-				t.Fatalf("failed to unmarshal result: %v", err)
-			}
-			if err := json.Unmarshal([]byte(tc.want), &want); err != nil {
-				t.Fatalf("failed to unmarshal want: %v", err)
-			}
-
-			if !reflect.DeepEqual(got, want) {
-				t.Fatalf("unexpected result: got %+v, want %+v", got, want)
-			}
-		})
-	}
-}
-
-func getRestoreBackupToolsConfig() map[string]any {
-	return map[string]any{
-		"sources": map[string]any{
-			"my-cloud-sql-source": map[string]any{
-				"kind": "cloud-sql-admin",
-			},
-		},
-		"tools": map[string]any{
-			"restore-backup": map[string]any{
-				"kind":   restoreBackupToolKind,
-				"source": "my-cloud-sql-source",
-			},
-		},
-	}
-}
--- a/tests/cloudsqlpg/cloud_sql_pg_integration_test.go
+++ b/tests/cloudsqlpg/cloud_sql_pg_integration_test.go
@@ -132,20 +132,12 @@ func TestCloudSQLPgSimpleToolEndpoints(t *testing.T) {
 	teardownTable2 := tests.SetupPostgresSQLTable(t, ctx, pool, createAuthTableStmt, insertAuthTableStmt, tableNameAuth, authTestParams)
 	defer teardownTable2(t)

-	// Set up table for semantic search
-	vectorTableName, tearDownVectorTable := tests.SetupPostgresVectorTable(t, ctx, pool)
-	defer tearDownVectorTable(t)
-
 	// Write config into a file and pass it to command
 	toolsFile := tests.GetToolsConfig(sourceConfig, CloudSQLPostgresToolType, paramToolStmt, idParamToolStmt, nameParamToolStmt, arrayToolStmt, authToolStmt)
 	toolsFile = tests.AddExecuteSqlConfig(t, toolsFile, "postgres-execute-sql")
 	tmplSelectCombined, tmplSelectFilterCombined := tests.GetPostgresSQLTmplToolStatement()
 	toolsFile = tests.AddTemplateParamConfig(t, toolsFile, CloudSQLPostgresToolType, tmplSelectCombined, tmplSelectFilterCombined, "")

-	// Add semantic search tool config
-	insertStmt, searchStmt := tests.GetPostgresVectorSearchStmts(vectorTableName)
-	toolsFile = tests.AddSemanticSearchConfig(t, toolsFile, CloudSQLPostgresToolType, insertStmt, searchStmt)
-
 	toolsFile = tests.AddPostgresPrebuiltConfig(t, toolsFile)
 	cmd, cleanup, err := tests.StartCmd(ctx, toolsFile, args...)
 	if err != nil {
@@ -194,7 +186,6 @@ func TestCloudSQLPgSimpleToolEndpoints(t *testing.T) {
 	tests.RunPostgresListDatabaseStatsTest(t, ctx, pool)
 	tests.RunPostgresListRolesTest(t, ctx, pool)
 	tests.RunPostgresListStoredProcedureTest(t, ctx, pool)
-	tests.RunSemanticSearchToolInvokeTest(t, "null", "", "The quick brown fox")
 }

 // Test connection with different IP type
--- a/tests/embedding.go
+++ b/tests/embedding.go
@@ -1,251 +0,0 @@
-// Copyright 2026 Google LLC
-//
-// Licensed under the Apache License, Version 2.0 (the "License");
-// you may not use this file except in compliance with the License.
-// You may obtain a copy of the License at
-//
-//     http://www.apache.org/licenses/LICENSE-2.0
-//
-// Unless required by applicable law or agreed to in writing, software
-// distributed under the License is distributed on an "AS IS" BASIS,
-// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-// See the License for the specific language governing permissions and
-// limitations under the License.
-
-// Package tests contains end to end tests meant to verify the Toolbox Server
-// works as expected when executed as a binary.
-
-package tests
-
-import (
-	"bytes"
-	"context"
-	"encoding/json"
-	"fmt"
-	"io"
-	"net/http"
-	"os"
-	"strings"
-	"testing"
-
-	"github.com/google/uuid"
-	"github.com/googleapis/genai-toolbox/internal/server/mcp/jsonrpc"
-	"github.com/jackc/pgx/v5/pgxpool"
-)
-
-var apiKey = os.Getenv("API_KEY")
-
-// AddSemanticSearchConfig adds embedding models and semantic search tools to the config
-// with configurable tool kind and SQL statements.
-func AddSemanticSearchConfig(t *testing.T, config map[string]any, toolKind, insertStmt, searchStmt string) map[string]any {
-	config["embeddingModels"] = map[string]any{
-		"gemini_model": map[string]any{
-			"kind":      "gemini",
-			"model":     "gemini-embedding-001",
-			"apiKey":    apiKey,
-			"dimension": 768,
-		},
-	}
-
-	tools, ok := config["tools"].(map[string]any)
-	if !ok {
-		t.Fatalf("unable to get tools from config")
-	}
-
-	tools["insert_docs"] = map[string]any{
-		"kind":        toolKind,
-		"source":      "my-instance",
-		"description": "Stores content and its vector embedding into the documents table.",
-		"statement":   insertStmt,
-		"parameters": []any{
-			map[string]any{
-				"name":        "content",
-				"type":        "string",
-				"description": "The text content associated with the vector.",
-			},
-			map[string]any{
-				"name":           "text_to_embed",
-				"type":           "string",
-				"description":    "The text content used to generate the vector.",
-				"embeddedBy":     "gemini_model",
-				"valueFromParam": "content",
-			},
-		},
-	}
-
-	tools["search_docs"] = map[string]any{
-		"kind":        toolKind,
-		"source":      "my-instance",
-		"description": "Finds the most semantically similar document to the query vector.",
-		"statement":   searchStmt,
-		"parameters": []any{
-			map[string]any{
-				"name":        "query",
-				"type":        "string",
-				"description": "The text content to search for.",
-				"embeddedBy":  "gemini_model",
-			},
-		},
-	}
-
-	config["tools"] = tools
-	return config
-}
-
-// RunSemanticSearchToolInvokeTest runs the insert_docs and search_docs tools
-// via both HTTP and MCP endpoints and verifies the output.
-func RunSemanticSearchToolInvokeTest(t *testing.T, insertWant, mcpInsertWant, searchWant string) {
-	// Initialize MCP session once for the MCP test cases
-	sessionId := RunInitialize(t, "2024-11-05")
-
-	tcs := []struct {
-		name        string
-		api         string
-		isMcp       bool
-		requestBody interface{}
-		want        string
-	}{
-		{
-			name:        "HTTP invoke insert_docs",
-			api:         "http://127.0.0.1:5000/api/tool/insert_docs/invoke",
-			isMcp:       false,
-			requestBody: `{"content": "The quick brown fox jumps over the lazy dog"}`,
-			want:        insertWant,
-		},
-		{
-			name:        "HTTP invoke search_docs",
-			api:         "http://127.0.0.1:5000/api/tool/search_docs/invoke",
-			isMcp:       false,
-			requestBody: `{"query": "fast fox jumping"}`,
-			want:        searchWant,
-		},
-		{
-			name:  "MCP invoke insert_docs",
-			api:   "http://127.0.0.1:5000/mcp",
-			isMcp: true,
-			requestBody: jsonrpc.JSONRPCRequest{
-				Jsonrpc: "2.0",
-				Id:      "mcp-insert-docs",
-				Request: jsonrpc.Request{
-					Method: "tools/call",
-				},
-				Params: map[string]any{
-					"name": "insert_docs",
-					"arguments": map[string]any{
-						"content": "The quick brown fox jumps over the lazy dog",
-					},
-				},
-			},
-			want: mcpInsertWant,
-		},
-		{
-			name:  "MCP invoke search_docs",
-			api:   "http://127.0.0.1:5000/mcp",
-			isMcp: true,
-			requestBody: jsonrpc.JSONRPCRequest{
-				Jsonrpc: "2.0",
-				Id:      "mcp-search-docs",
-				Request: jsonrpc.Request{
-					Method: "tools/call",
-				},
-				Params: map[string]any{
-					"name": "search_docs",
-					"arguments": map[string]any{
-						"query": "fast fox jumping",
-					},
-				},
-			},
-			want: searchWant,
-		},
-	}
-
-	for _, tc := range tcs {
-		t.Run(tc.name, func(t *testing.T) {
-			var bodyReader io.Reader
-			headers := map[string]string{}
-
-			// Prepare Request Body and Headers
-			if tc.isMcp {
-				reqBytes, err := json.Marshal(tc.requestBody)
-				if err != nil {
-					t.Fatalf("failed to marshal mcp request: %v", err)
-				}
-				bodyReader = bytes.NewBuffer(reqBytes)
-				if sessionId != "" {
-					headers["Mcp-Session-Id"] = sessionId
-				}
-			} else {
-				bodyReader = bytes.NewBufferString(tc.requestBody.(string))
-			}
-
-			// Send Request
-			resp, respBody := RunRequest(t, http.MethodPost, tc.api, bodyReader, headers)
-
-			if resp.StatusCode != http.StatusOK {
-				t.Fatalf("response status code is not 200, got %d: %s", resp.StatusCode, string(respBody))
-			}
-
-			// Normalize Response to get the actual tool result string
-			var got string
-			if tc.isMcp {
-				var mcpResp struct {
-					Result struct {
-						Content []struct {
-							Text string `json:"text"`
-						} `json:"content"`
-					} `json:"result"`
-				}
-				if err := json.Unmarshal(respBody, &mcpResp); err != nil {
-					t.Fatalf("error parsing mcp response: %s", err)
-				}
-				if len(mcpResp.Result.Content) > 0 {
-					got = mcpResp.Result.Content[0].Text
-				}
-			} else {
-				var httpResp map[string]interface{}
-				if err := json.Unmarshal(respBody, &httpResp); err != nil {
-					t.Fatalf("error parsing http response: %s", err)
-				}
-				if res, ok := httpResp["result"].(string); ok {
-					got = res
-				}
-			}
-
-			if !strings.Contains(got, tc.want) {
-				t.Fatalf("unexpected value: got %q, want %q", got, tc.want)
-			}
-		})
-	}
-}
-
-// SetupPostgresVectorTable sets up the vector extension and a vector table
-func SetupPostgresVectorTable(t *testing.T, ctx context.Context, pool *pgxpool.Pool) (string, func(*testing.T)) {
-	t.Helper()
-	if _, err := pool.Exec(ctx, "CREATE EXTENSION IF NOT EXISTS vector"); err != nil {
-		t.Fatalf("failed to create vector extension: %v", err)
-	}
-
-	tableName := "vector_table_" + strings.ReplaceAll(uuid.New().String(), "-", "")
-
-	createTableStmt := fmt.Sprintf(`CREATE TABLE %s (
-		id SERIAL PRIMARY KEY, 
-		content TEXT, 
-		embedding vector(768)
-	)`, tableName)
-
-	if _, err := pool.Exec(ctx, createTableStmt); err != nil {
-		t.Fatalf("failed to create table %s: %v", tableName, err)
-	}
-
-	return tableName, func(t *testing.T) {
-		if _, err := pool.Exec(ctx, fmt.Sprintf("DROP TABLE IF EXISTS %s", tableName)); err != nil {
-			t.Errorf("failed to drop table %s: %v", tableName, err)
-		}
-	}
-}
-
-func GetPostgresVectorSearchStmts(vectorTableName string) (string, string) {
-	insertStmt := fmt.Sprintf("INSERT INTO %s (content, embedding) VALUES ($1, $2)", vectorTableName)
-	searchStmt := fmt.Sprintf("SELECT id, content, embedding <-> $1 AS distance FROM %s ORDER BY distance LIMIT 1", vectorTableName)
-	return insertStmt, searchStmt
-}
--- a/tests/postgres/postgres_integration_test.go
+++ b/tests/postgres/postgres_integration_test.go
@@ -111,10 +111,6 @@ func TestPostgres(t *testing.T) {
 	teardownTable2 := tests.SetupPostgresSQLTable(t, ctx, pool, createAuthTableStmt, insertAuthTableStmt, tableNameAuth, authTestParams)
 	defer teardownTable2(t)

-	// Set up table for semantic search
-	vectorTableName, tearDownVectorTable := tests.SetupPostgresVectorTable(t, ctx, pool)
-	defer tearDownVectorTable(t)
-
 	// Write config into a file and pass it to command
 	toolsFile := tests.GetToolsConfig(sourceConfig, PostgresToolType, paramToolStmt, idParamToolStmt, nameParamToolStmt, arrayToolStmt, authToolStmt)
 	toolsFile = tests.AddExecuteSqlConfig(t, toolsFile, "postgres-execute-sql")
@@ -122,10 +118,6 @@ func TestPostgres(t *testing.T) {
 	toolsFile = tests.AddTemplateParamConfig(t, toolsFile, PostgresToolType, tmplSelectCombined, tmplSelectFilterCombined, "")
 	toolsFile = tests.AddPostgresPrebuiltConfig(t, toolsFile)

-	// Add semantic search tool config
-	insertStmt, searchStmt := tests.GetPostgresVectorSearchStmts(vectorTableName)
-	toolsFile = tests.AddSemanticSearchConfig(t, toolsFile, PostgresToolType, insertStmt, searchStmt)
-
 	cmd, cleanup, err := tests.StartCmd(ctx, toolsFile, args...)
 	if err != nil {
 		t.Fatalf("command initialization returned an error: %s", err)
@@ -173,5 +165,4 @@ func TestPostgres(t *testing.T) {
 	tests.RunPostgresListDatabaseStatsTest(t, ctx, pool)
 	tests.RunPostgresListRolesTest(t, ctx, pool)
 	tests.RunPostgresListStoredProcedureTest(t, ctx, pool)
-	tests.RunSemanticSearchToolInvokeTest(t, "null", "", "The quick brown fox")
 }
--- a/tests/tool.go
+++ b/tests/tool.go
@@ -1240,10 +1240,7 @@ func RunPostgresListTablesTest(t *testing.T, tableNameParam, tableNameAuth, user
 					var filteredGot []any
 					for _, item := range got {
 						if tableMap, ok := item.(map[string]interface{}); ok {
-							name, _ := tableMap["object_name"].(string)
-
-							// Only keep the table if it matches expected test tables
-							if name == tableNameParam || name == tableNameAuth {
+							if schema, ok := tableMap["schema_name"]; ok && schema == "public" {
 								filteredGot = append(filteredGot, item)
 							}
 						}
Author	SHA1	Message	Date
Yuan Teoh	f6fef90359	chore: update docs and root test	2026-01-22 22:06:56 -08:00
Yuan Teoh	87c5953b75	chore: update yaml for tests	2026-01-22 17:18:57 -08:00
Yuan Teoh	7f0c49a4df	chore: update yaml tag for tools	2026-01-22 17:11:12 -08:00
Yuan Teoh	ad8df40791	chore: update yaml tag for auth, embedding model, prompts, sources	2026-01-21 22:49:22 -08:00
Yuan Teoh	c29355ff82	chore: update unmarshal function for ToolsFile	2026-01-21 22:49:06 -08:00
Yuan Teoh	70f5550910	Update cmd/root_test.go Co-authored-by: gemini-code-assist[bot] <176961590+gemini-code-assist[bot]@users.noreply.github.com>	2026-01-20 11:25:03 -08:00
Yuan Teoh	348c9fde08	chore: add preprocessing function to convert tools file	2026-01-20 11:25:03 -08:00
Yuan Teoh	aef539bcf3	refactor!: update `Kind` field to `Type` in source code (#2312 ) Update source code `Kind` to `Type`. It's only changes within our code. Changes to yaml tag (that will affect users) will be done in later PRs. This is a breaking change since it updates telemetry's span attribute from `source_kind` to `source_type`. Related #817 Future updates will include: * Updating a preprocessing function to convert config file from v1 to v2 * Update unmarshal function for ToolsFile to convert config file (test will fail since the yaml tag is not yet updated). * Update yaml tag (test will pass).	2026-01-20 11:20:41 -08:00
@@ -1 +1 @@
 .26.0
 .25.0