Clean up correctly after API caller leaves

API: Log errors; automatically print() ggplot2
Accept input via JSON POST
2026-01-11 16:08:19 -05:00 · 2017-01-12 23:56:10 -05:00 · 2017-01-12 23:56:10 -05:00 · 2017-01-12 23:56:10 -05:00 · 2017-01-12 23:56:10 -05:00 · 2017-01-12 23:56:10 -05:00
272 changed files with 2416 additions and 6950 deletions
--- a/CONTRIBUTING.md
+++ b/CONTRIBUTING.md
@@ -2,7 +2,7 @@ We welcome contributions to the **shiny** package. To submit a contribution:

 1. [Fork](https://github.com/rstudio/shiny/fork) the repository and make your changes.

-2. Ensure that you have signed the [individual](https://rstudioblog.files.wordpress.com/2017/05/rstudio_individual_contributor_agreement.pdf) or [corporate](https://rstudioblog.files.wordpress.com/2017/05/rstudio_corporate_contributor_agreement.pdf) contributor agreement as appropriate. You can send the signed copy to jj@rstudio.com.
+2. If the change is non-trivial, ensure that you have signed the [individual](http://www.rstudio.com/wp-content/uploads/2014/06/RStudioIndividualContributorAgreement.pdf) or [corporate](http://www.rstudio.com/wp-content/uploads/2014/06/RStudioCorporateContributorAgreement.pdf) contributor agreement as appropriate. You can send the signed copy to jj@rstudio.com. For trivial changes (like typo fixes), a contributor agreement is not needed.

 3. Submit a [pull request](https://help.github.com/articles/using-pull-requests).

--- a/22
+++ b/22
@@ -1,7 +1,7 @@
 Package: shiny
 Type: Package
 Title: Web Application Framework for R
-Version: 1.0.5
+Version: 1.0.0
 Authors@R: c(
    person("Winston", "Chang", role = c("aut", "cre"), email = "winston@rstudio.com"),
    person("Joe", "Cheng", role = "aut", email = "joe@rstudio.com"),
@@ -56,23 +56,22 @@ Authors@R: c(
    )
 Description: Makes it incredibly easy to build interactive web
    applications with R. Automatic "reactive" binding between inputs and
-    outputs and extensive prebuilt widgets make it possible to build
+    outputs and extensive pre-built widgets make it possible to build
    beautiful, responsive, and powerful applications with minimal effort.
 License: GPL-3 | file LICENSE
 Depends:
-    R (>= 3.0.2),
+    R (>= 3.0.0),
    methods
 Imports:
    utils,
-    httpuv (>= 1.3.5),
+    httpuv (>= 1.3.3),
    mime (>= 0.3),
    jsonlite (>= 0.9.16),
    xtable,
    digest,
    htmltools (>= 0.3.5),
    R6 (>= 2.0),
-    sourcetools,
-    tools
+    sourcetools
 Suggests:
    datasets,
    Cairo (>= 1.5-5),
@@ -84,7 +83,7 @@ Suggests:
    magrittr
 URL: http://shiny.rstudio.com
 BugReports: https://github.com/rstudio/shiny/issues
-Collate: 
+Collate:
    'app.R'
    'bookmark-state-local.R'
    'stack.R'
@@ -99,9 +98,6 @@ Collate:
    'diagnose.R'
    'fileupload.R'
    'graph.R'
-    'reactives.R'
-    'reactive-domains.R'
-    'history.R'
    'hooks.R'
    'html-deps.R'
    'htmltools.R'
@@ -123,7 +119,6 @@ Collate:
    'input-text.R'
    'input-textarea.R'
    'input-utils.R'
-    'insert-tab.R'
    'insert-ui.R'
    'jqueryui.R'
    'middleware-shiny.R'
@@ -134,6 +129,8 @@ Collate:
    'priorityqueue.R'
    'progress.R'
    'react.R'
+    'reactive-domains.R'
+    'reactives.R'
    'render-plot.R'
    'render-table.R'
    'run-url.R'
@@ -145,9 +142,8 @@ Collate:
    'shinyui.R'
    'shinywrappers.R'
    'showcase.R'
-    'snapshot.R'
    'tar.R'
    'test-export.R'
    'timer.R'
    'update-input.R'
-RoxygenNote: 6.0.1
+RoxygenNote: 5.0.1
--- a/2
+++ b/2
@@ -12,7 +12,7 @@ these components are included below):
 - Respond.js, https://github.com/scottjehl/Respond
 - bootstrap-datepicker, https://github.com/eternicode/bootstrap-datepicker
 - Font Awesome, https://github.com/FortAwesome/Font-Awesome
- selectize.js, https://github.com/selectize/selectize.js
+- selectize.js, https://github.com/brianreavis/selectize.js
 - es5-shim, https://github.com/es-shims/es5-shim
 - ion.rangeSlider, https://github.com/IonDen/ion.rangeSlider
 - strftime for Javascript, https://github.com/samsonjs/strftime
--- a/30
+++ b/30
@@ -2,18 +2,24 @@

 S3method("$",reactivevalues)
 S3method("$",session_proxy)
+S3method("$",shinyapi)
 S3method("$",shinyoutput)
 S3method("$<-",reactivevalues)
 S3method("$<-",session_proxy)
+S3method("$<-",shinyapi)
 S3method("$<-",shinyoutput)
 S3method("[",reactivevalues)
+S3method("[",shinyapi)
 S3method("[",shinyoutput)
 S3method("[<-",reactivevalues)
+S3method("[<-",shinyapi)
 S3method("[<-",shinyoutput)
 S3method("[[",reactivevalues)
 S3method("[[",session_proxy)
+S3method("[[",shinyapi)
 S3method("[[",shinyoutput)
 S3method("[[<-",reactivevalues)
+S3method("[[<-",shinyapi)
 S3method("[[<-",shinyoutput)
 S3method("names<-",reactivevalues)
 S3method(as.list,reactivevalues)
@@ -22,8 +28,6 @@ S3method(as.shiny.appobj,list)
 S3method(as.shiny.appobj,shiny.appobj)
 S3method(as.tags,shiny.appobj)
 S3method(as.tags,shiny.render.function)
-S3method(format,reactiveExpr)
-S3method(format,reactiveVal)
 S3method(names,reactivevalues)
 S3method(print,reactive)
 S3method(print,shiny.appobj)
@@ -40,7 +44,6 @@ export(actionButton)
 export(actionLink)
 export(addResourcePath)
 export(animationOptions)
-export(appendTab)
 export(as.shiny.appobj)
 export(basicPage)
 export(bookmarkButton)
@@ -87,12 +90,9 @@ export(flowLayout)
 export(fluidPage)
 export(fluidRow)
 export(formatStackTrace)
-export(freezeReactiveVal)
 export(freezeReactiveValue)
 export(getDefaultReactiveDomain)
-export(getQueryString)
 export(getShinyOption)
-export(getUrlHash)
 export(h1)
 export(h2)
 export(h3)
@@ -101,7 +101,6 @@ export(h5)
 export(h6)
 export(headerPanel)
 export(helpText)
-export(hideTab)
 export(hoverOpts)
 export(hr)
 export(htmlOutput)
@@ -116,7 +115,6 @@ export(includeMarkdown)
 export(includeScript)
 export(includeText)
 export(inputPanel)
-export(insertTab)
 export(insertUI)
 export(installExprFunction)
 export(invalidateLater)
@@ -124,7 +122,6 @@ export(is.reactive)
 export(is.reactivevalues)
 export(is.shiny.appobj)
 export(is.singleton)
-export(isRunning)
 export(isTruthy)
 export(isolate)
 export(knit_print.html)
@@ -156,7 +153,6 @@ export(onReactiveDomainEnded)
 export(onRestore)
 export(onRestored)
 export(onSessionEnded)
-export(onStop)
 export(outputOptions)
 export(p)
 export(pageWithSidebar)
@@ -166,7 +162,6 @@ export(passwordInput)
 export(plotOutput)
 export(plotPNG)
 export(pre)
-export(prependTab)
 export(printError)
 export(printStackTrace)
 export(radioButtons)
@@ -179,14 +174,12 @@ export(reactiveTable)
 export(reactiveText)
 export(reactiveTimer)
 export(reactiveUI)
-export(reactiveVal)
 export(reactiveValues)
 export(reactiveValuesToList)
 export(registerInputHandler)
 export(removeInputHandler)
 export(removeModal)
 export(removeNotification)
-export(removeTab)
 export(removeUI)
 export(renderDataTable)
 export(renderImage)
@@ -207,10 +200,14 @@ export(runUrl)
 export(safeError)
 export(selectInput)
 export(selectizeInput)
+export(serveCSV)
+export(serveJSON)
+export(servePlot)
+export(serveRaw)
+export(serveText)
 export(serverInfo)
 export(setBookmarkExclude)
 export(setProgress)
-export(setSerializer)
 export(shinyApp)
 export(shinyAppDir)
 export(shinyAppFile)
@@ -221,14 +218,10 @@ export(showBookmarkUrlModal)
 export(showModal)
 export(showNotification)
 export(showReactLog)
-export(showTab)
 export(sidebarLayout)
 export(sidebarPanel)
 export(singleton)
 export(sliderInput)
-export(snapshotExclude)
-export(snapshotPreprocessInput)
-export(snapshotPreprocessOutput)
 export(span)
 export(splitLayout)
 export(stopApp)
@@ -285,3 +278,4 @@ import(httpuv)
 import(methods)
 import(mime)
 import(xtable)
+importFrom(utils,write.csv)
--- a/NEWS.md
+++ b/NEWS.md
@@ -1,184 +1,3 @@
-shiny 1.0.5
-===========
-
-## Full changelog
-
-### Bug fixes
-
-* Fixed [#1818](https://github.com/rstudio/shiny/issues/1818): `conditionalPanel()` expressions that have a newline character in them caused the application to not work. ([#1820](https://github.com/rstudio/shiny/pull/1820))
-
-* Added a safe wrapper function for internal calls to `jsonlite::fromJSON()`. ([#1822](https://github.com/rstudio/shiny/pull/1822))
-
-* Fixed [#1824](https://github.com/rstudio/shiny/issues/1824): HTTP HEAD requests on static files caused the application to stop. ([#1825](https://github.com/rstudio/shiny/pull/1825))
-
-
-shiny 1.0.4
-===========
-
-There are three headlining features in this release of Shiny. It is now possible to add and remove tabs from a `tabPanel`; there is a new function, `onStop()`, which registers callbacks that execute when an application exits; and `fileInput`s now can have files dragged and dropped on them. In addition to these features, this release has a number of minor features and bug fixes. See the full changelog below for more details.
-
-## Full changelog
-
-### New features
-
-* Implemented [#1668](https://github.com/rstudio/shiny/issues/1668): dynamic tabs: added functions (`insertTab`, `appendTab`, `prependTab`, `removeTab`, `showTab` and `hideTab`) that allow you to do those actions for an existing `tabsetPanel`. ([#1794](https://github.com/rstudio/shiny/pull/1794))
-
-* Implemented [#1213](https://github.com/rstudio/shiny/issues/1213): Added a new function, `onStop()`, which can be used to register callback functions that are invoked when an application exits, or when a user session ends. (Multiple sessions can be connected to a single running Shiny application.) This is useful if you have finalization/clean-up code that should be run after the application exits. ([#1770](https://github.com/rstudio/shiny/pull/1770)
-
-* Implemented [#1155](https://github.com/rstudio/shiny/issues/1155): Files can now be drag-and-dropped on `fileInput` controls. The appearance of `fileInput` controls while files are being dragged can be modified by overriding the `shiny-file-input-active` and `shiny-file-input-over` classes. ([#1782](https://github.com/rstudio/shiny/pull/1782))
-
-### Minor new features and improvements
-
-* Addressed [#1688](https://github.com/rstudio/shiny/issues/1688): trigger a new `shiny:outputinvalidated` event when an output gets invalidated, at the same time that the `recalculating` CSS class is added. ([#1758](https://github.com/rstudio/shiny/pull/1758), thanks [@andrewsali](https://github.com/andrewsali)!)
-
-* Addressed [#1508](https://github.com/rstudio/shiny/issues/1508): `fileInput` now permits the same file to be uploaded multiple times. ([#1719](https://github.com/rstudio/shiny/pull/1719))
-
-* Addressed [#1501](https://github.com/rstudio/shiny/issues/1501): The `fileInput` control now retains uploaded file extensions on the server. This fixes [readxl](https://github.com/tidyverse/readxl)'s `readxl::read_excel` and other functions that must recognize a file's extension in order to work. ([#1706](https://github.com/rstudio/shiny/pull/1706))
-
-* For `conditionalPanel`s, Shiny now gives more informative messages if there are errors evaluating or parsing the JavaScript conditional expression. ([#1727](https://github.com/rstudio/shiny/pull/1727))
-
-* Addressed [#1586](https://github.com/rstudio/shiny/issues/1586): The `conditionalPanel` function now accepts an `ns` argument. The `ns` argument can be used in a [module](https://shiny.rstudio.com/articles/modules.html) UI function to scope the `condition` expression to the module's own input and output IDs. ([#1735](https://github.com/rstudio/shiny/pull/1735))
-
-* With `options(shiny.testmode=TRUE)`, the Shiny process will send a message to the client in response to a changed input, even if no outputs have changed. This helps to streamline testing using the shinytest package. ([#1747](https://github.com/rstudio/shiny/pull/1747))
-
-* Addressed [#1738](https://github.com/rstudio/shiny/issues/1738): The `updateTextInput` and `updateTextAreaInput` functions can now update the placeholder. ([#1742](https://github.com/rstudio/shiny/pull/1742))
-
-* Converted examples to single file apps, and made updates and enhancements to comments in the example app scripts. ([#1685](https://github.com/rstudio/shiny/pull/1685))
-
-* Added new `snapshotPreprocessInput()` and `snapshotPreprocessOutput()` functions, which is used for preprocessing and input and output values before taking a test snapshot. ([#1760](https://github.com/rstudio/shiny/pull/1760), [#1789](https://github.com/rstudio/shiny/pull/1789))
-
-* The HTML generated by `renderTable()` no longer includes comments with the R version, xtable version, and timestamp. ([#1771](https://github.com/rstudio/shiny/pull/1771))
-
-* Added a function `isRunning` to test whether a Shiny app is currently running. ([#1785](https://github.com/rstudio/shiny/pull/1785))
-
-* Added a function `setSerializer`, which allows authors to specify a function for serializing the value of a custom input. ([#1791](https://github.com/rstudio/shiny/pull/1791))
-
-### Bug fixes
-
-* Fixed [#1546](https://github.com/rstudio/shiny/issues/1546): make it possible (without any hacks) to write arbitrary data into a module's `session$userData` (which is exactly the same environment as the parent's `session$userData`). To be clear, it allows something like `session$userData$x <- TRUE`, but not something like `session$userData <- TRUE` (that is not allowed in any context, whether you're in the main app, or in a module) ([#1732](https://github.com/rstudio/shiny/pull/1732)).
-
-* Fixed [#1701](https://github.com/rstudio/shiny/issues/1701): There was a partial argument match in the `generateOptions` function. ([#1702](https://github.com/rstudio/shiny/pull/1702))
-
-* Fixed [#1710](https://github.com/rstudio/shiny/issues/1710): `ReactiveVal` objects did not have separate dependents. ([#1712](https://github.com/rstudio/shiny/pull/1712))
-
-* Fixed [#1438](https://github.com/rstudio/shiny/issues/1438): `unbindAll()` should not be called when inserting content with `insertUI()`. A previous fix ([#1449](https://github.com/rstudio/shiny/pull/1449)) did not work correctly. ([#1736](https://github.com/rstudio/shiny/pull/1736))
-
-* Fixed [#1755](https://github.com/rstudio/shiny/issues/1755): dynamic htmlwidgets sent the path of the package on the server to the client. ([#1756](https://github.com/rstudio/shiny/pull/1756))
-
-* Fixed [#1763](https://github.com/rstudio/shiny/issues/1763): Shiny's private random stream leaked out into the main random stream. ([#1768](https://github.com/rstudio/shiny/pull/1768))
-
-* Fixed [#1680](https://github.com/rstudio/shiny/issues/1680): `options(warn=2)` was not respected when running an app. ([#1790](https://github.com/rstudio/shiny/pull/1790))
-
-* Fixed [#1772](https://github.com/rstudio/shiny/issues/1772): ensure that `runApp()` respects the `shinyApp(onStart = function())` argument. ([#1770](https://github.com/rstudio/shiny/pull/1770))
-
-* Fixed [#1474](https://github.com/rstudio/shiny/issues/1474): A `browser()` call in an observer could cause an error in the RStudio IDE on Windows. ([#1802](https://github.com/rstudio/shiny/pull/1802))
-
-
-shiny 1.0.3
-================
-
-This is a hotfix release of Shiny. With previous versions of Shiny, when running an application on the newly-released version of R, 3.4.0, it would print a message: `Warning in body(fun) : argument is not a function`. This has no effect on the application, but because the message could be alarming to users, we are releasing a new version of Shiny that fixes this issue.
-
-## Full changelog
-
-### Bug fixes
-
-* Fixed [#1672](https://github.com/rstudio/shiny/issues/1672): When an error occurred while uploading a file, the progress bar did not change colors. ([#1673](https://github.com/rstudio/shiny/pull/1673))
-
-* Fixed [#1676](https://github.com/rstudio/shiny/issues/1676): On R 3.4.0, running a Shiny application gave a warning: `Warning in body(fun) : argument is not a function`. ([#1677](https://github.com/rstudio/shiny/pull/1677))
-
-
-shiny 1.0.2
-================
-
-This is a hotfix release of Shiny. The primary reason for this release is because the web host for MathJax JavaScript library is scheduled to be shut down in the next few weeks. After it is shut down, Shiny applications that use MathJax will no longer be able to load the MathJax library if they are run with Shiny 1.0.1 and below. (If you don't know whether your application uses MathJax, it probably does not.) For more information about why the MathJax CDN is shutting down, see https://www.mathjax.org/cdn-shutting-down/.
-
-## Full changelog
-
-### Minor new features and improvements
-
-* Added a `shiny:sessioninitialized` Javascript event, which is fired at the end of the initialize method of the Session object. This allows us to listen for this event when we want to get the value of things like `Shiny.user`. ([#1568](https://github.com/rstudio/shiny/pull/1568))
-
-* Fixed [#1649](https://github.com/rstudio/shiny/issues/1649): allow the `choices` argument in `checkboxGroupInput()` to be `NULL` (or `c()`) to keep backward compatibility with Shiny < 1.0.1. This will result in the same thing as providing `choices = character(0)`. ([#1652](https://github.com/rstudio/shiny/pull/1652))
-
-* The official URL for accessing MathJax libraries over CDN has been deprecated and will be removed soon. We have switched to a new rstudio.com URL that we will support going forward. ([#1664](https://github.com/rstudio/shiny/pull/1664))
-
-### Bug fixes
-
-* Fixed [#1653](https://github.com/rstudio/shiny/issues/1653): wrong code example in documentation. ([#1658](https://github.com/rstudio/shiny/pull/1658))
-
-
-shiny 1.0.1
-================
-
-This is a maintenance release of Shiny, mostly aimed at fixing bugs and introducing minor features. The most notable additions in this version of Shiny are the introduction of the `reactiveVal()` function (it's like `reactiveValues()`, but it only stores a single value), and that the choices of `radioButtons()` and `checkboxGroupInput()` can now contain HTML content instead of just plain text.
-
-## Full changelog
-
-### Breaking changes
-
-* The functions `radioButtons()`, `checkboxGroupInput()` and `selectInput()` (and the corresponding `updateXXX()` functions) no longer accept a `selected` argument whose value is the name of a choice, instead of the value of the choice. This feature had been deprecated since Shiny 0.10 (it printed a warning message, but still tried to match the name to the right choice) and it's now completely unsupported.
-
-### New features
-
-* Added `reactiveVal` function, for storing a single value which can be (reactively) read and written. Similar to `reactiveValues`, except that `reactiveVal` just lets you store a single value instead of storing multiple values by name. ([#1614](https://github.com/rstudio/shiny/pull/1614))
-
-### Minor new features and improvements
-
-* Fixed [#1637](https://github.com/rstudio/shiny/issues/1637): Outputs stay faded on MS Edge. ([#1640](https://github.com/rstudio/shiny/pull/1640))
-
-* Addressed [#1348](https://github.com/rstudio/shiny/issues/1348) and [#1437](https://github.com/rstudio/shiny/issues/1437) by adding two new arguments to `radioButtons()` and `checkboxGroupInput()`: `choiceNames` (list or vector) and `choiceValues` (list or vector). These can be passed in as an alternative to `choices`, with the added benefit that the elements in `choiceNames` can be arbitrary UI (i.e. anything created by `HTML()` and the `tags()` functions, like icons and images). While the underlying values for each choice (passed in through `choiceValues`) must still be simple text, their visual representation on the app (what the user actually clicks to select a different option) can be any valid HTML element. See `?radioButtons` for a small example. ([#1521](https://github.com/rstudio/shiny/pull/1521))
-
-* Updated `tools/README.md` with more detailed instructions. ([#1616](https://github.com/rstudio/shiny/pull/1616))
-
-* Fixed [#1565](https://github.com/rstudio/shiny/issues/1565), which meant that resources with spaces in their names return HTTP 404. ([#1566](https://github.com/rstudio/shiny/pull/1566))
-
-* Exported `session$user` (if it exists) to the client-side; it's accessible in the Shiny object: `Shiny.user`. ([#1563](https://github.com/rstudio/shiny/pull/1563))
-
-* Added support for HTML5's `pushState` which allows for pseudo-navigation
-in shiny apps. For more info, see the documentation (`?updateQueryString` and `?getQueryString`). ([#1447](https://github.com/rstudio/shiny/pull/1447))
-
-* Fixed [#1121](https://github.com/rstudio/shiny/issues/1121): plot interactions with ggplot2 now support `coord_fixed()`. ([#1525](https://github.com/rstudio/shiny/pull/1525))
-
-* Added `snapshotExclude` function, which marks an output so that it is not recorded in a test snapshot. ([#1559](https://github.com/rstudio/shiny/pull/1559))
-
-* Added `shiny:filedownload` JavaScript event, which is triggered when a `downloadButton` or `downloadLink` is clicked. Also, the values of `downloadHandler`s are not recorded in test snapshots, because the values change every time the application is run. ([#1559](https://github.com/rstudio/shiny/pull/1559))
-
-* Added support for plot interactions with ggplot2 > 2.2.1. ([#1578](https://github.com/rstudio/shiny/pull/1578))
-
-* Fixed [#1577](https://github.com/rstudio/shiny/issues/1577): Improved `escapeHTML` (util.js) in terms of the order dependency of replacing, XSS risk attack and performance. ([#1579](https://github.com/rstudio/shiny/pull/1579))
-
-* The `shiny:inputchanged` JavaScript event now includes two new fields, `binding` and `el`, which contain the input binding and DOM element, respectively. Additionally, `Shiny.onInputChange()` now accepts an optional argument, `opts`, which can contain the same fields. ([#1596](https://github.com/rstudio/shiny/pull/1596))
-
-* The `NS()` function now returns a vectorized function. ([#1613](https://github.com/rstudio/shiny/pull/1613))
-
-* Fixed [#1617](https://github.com/rstudio/shiny/issues/1617): `fileInput` can have customized text for the button and the placeholder. ([#1619](https://github.com/rstudio/shiny/pull/1619))
-
-### Bug fixes
-
-* Fixed [#1511](https://github.com/rstudio/shiny/issues/1511): `fileInput`s did not trigger the `shiny:inputchanged` event on the client. Also removed `shiny:fileuploaded` JavaScript event, because it is no longer needed after this fix. ([#1541](https://github.com/rstudio/shiny/pull/1541), [#1570](https://github.com/rstudio/shiny/pull/1570))
-
-* Fixed [#1472](https://github.com/rstudio/shiny/issues/1472): With a Progress object, calling `set(value=NULL)` made the progress bar go to 100%. Now it does not change the value of the progress bar. The documentation also incorrectly said that setting the `value` to `NULL` would hide the progress bar. ([#1547](https://github.com/rstudio/shiny/pull/1547))
-
-* Fixed [#162](https://github.com/rstudio/shiny/issues/162): When a dynamically-generated input changed to a different `inputType`, it might be incorrectly deduplicated.  ([#1594](https://github.com/rstudio/shiny/pull/1594))
-
-* Removed redundant call to `inputs.setInput`. ([#1595](https://github.com/rstudio/shiny/pull/1595))
-
-* Fixed bug where `dateRangeInput` did not respect `weekstart` argument. ([#1592](https://github.com/rstudio/shiny/pull/1592))
-
-* Fixed [#1598](https://github.com/rstudio/shiny/issues/1598): `setBookmarkExclude()` did not work properly inside of modules. ([#1599](https://github.com/rstudio/shiny/pull/1599))
-
-* Fixed [#1605](https://github.com/rstudio/shiny/issues/1605): sliders did not move when clicked on the bar area. ([#1610](https://github.com/rstudio/shiny/pull/1610))
-
-* Fixed [#1621](https://github.com/rstudio/shiny/issues/1621): if a `reactiveTimer`'s session was closed before the first time that the `reactiveTimer` fired, then the `reactiveTimer` would not get cleared and would keep firing indefinitely. ([#1623](https://github.com/rstudio/shiny/pull/1623))
-
-* Fixed [#1634](https://github.com/rstudio/shiny/issues/1634): If brushing on a plot causes the plot to redraw, then the redraw could in turn trigger the plot to redraw again and again. This was due to spurious changes in values of floating point numbers. ([#1641](https://github.com/rstudio/shiny/pull/1641))
-
-### Library updates
-
-* Closed [#1500](https://github.com/rstudio/shiny/issues/1500): Updated ion.rangeSlider to 2.1.6. ([#1540](https://github.com/rstudio/shiny/pull/1540))
-
-
 shiny 1.0.0
 ===========

--- a/R/app.R
+++ b/R/app.R
@@ -71,7 +71,7 @@
 #' }
 #' @export
 shinyApp <- function(ui=NULL, server=NULL, onStart=NULL, options=list(),
-                     uiPattern="/", enableBookmarking=NULL) {
+                     uiPattern="/", enableBookmarking = NULL) {
  if (is.null(server)) {
    stop("`server` missing from shinyApp")
  }
@@ -212,7 +212,7 @@ shinyAppDir_serverR <- function(appDir, options=list()) {
    if (file.exists(file.path.ci(appDir, "global.R")))
      sourceUTF8(file.path.ci(appDir, "global.R"))
  }
-  onStop <- function() {
+  onEnd <- function() {
    setwd(oldwd)
    monitorHandle()
    monitorHandle <<- NULL
@@ -223,7 +223,7 @@ shinyAppDir_serverR <- function(appDir, options=list()) {
      httpHandler = joinHandlers(c(uiHandler, wwwDir, fallbackWWWDir)),
      serverFuncSource = serverFuncSource,
      onStart = onStart,
-      onStop = onStop,
+      onEnd = onEnd,
      options = options
    ),
    class = "shiny.appobj"
@@ -317,9 +317,8 @@ shinyAppDir_appR <- function(fileName, appDir, options=list())
    oldwd <<- getwd()
    setwd(appDir)
    monitorHandle <<- initAutoReloadMonitor(appDir)
-    if (!is.null(appObj()$onStart)) appObj()$onStart()
  }
-  onStop <- function() {
+  onEnd <- function() {
    setwd(oldwd)
    monitorHandle()
    monitorHandle <<- NULL
@@ -330,7 +329,7 @@ shinyAppDir_appR <- function(fileName, appDir, options=list())
      httpHandler = joinHandlers(c(dynHttpHandler, wwwDir, fallbackWWWDir)),
      serverFuncSource = dynServerFuncSource,
      onStart = onStart,
-      onStop = onStop,
+      onEnd = onEnd,
      options = options
    ),
    class = "shiny.appobj"
--- a/R/bookmark-state.R
+++ b/R/bookmark-state.R
@@ -342,26 +342,10 @@ RestoreContext <- R6Class("RestoreContext",
      }


-      inputs <- parseQueryString(inputStr, nested = TRUE)
-      values <- parseQueryString(valueStr, nested = TRUE)
+      inputs <- parseQueryStringJSON(inputStr, nested = TRUE)
+      values <- parseQueryStringJSON(valueStr, nested = TRUE)

-      valuesFromJSON <- function(vals) {
-        mapply(names(vals), vals, SIMPLIFY = FALSE,
-          FUN = function(name, value) {
-            tryCatch(
-              safeFromJSON(value),
-              error = function(e) {
-                stop("Failed to parse URL parameter \"", name, "\"")
-              }
-            )
-          }
-        )
-      }
-
-      inputs <- valuesFromJSON(inputs)
      self$input <- RestoreInputSet$new(inputs)
-
-      values <- valuesFromJSON(values)
      self$values <- list2env2(values, self$values)
    }
  )
@@ -493,90 +477,12 @@ restoreInput <- function(id, default) {
 #' It typically is called from an observer. Note that this will not work in
 #' Internet Explorer 9 and below.
 #'
-#' For \code{mode = "push"}, only three updates are currently allowed:
-#' \enumerate{
-#'   \item the query string (format: \code{?param1=val1&param2=val2})
-#'   \item the hash (format: \code{#hash})
-#'   \item both the query string and the hash
-#'     (format: \code{?param1=val1&param2=val2#hash})
-#' }
-#'
-#' In other words, if \code{mode = "push"}, the \code{queryString} must start
-#' with either \code{?} or with \code{#}.
-#'
-#' A technical curiosity: under the hood, this function is calling the HTML5
-#' history API (which is where the names for the \code{mode} argument come from).
-#' When \code{mode = "replace"}, the function called is
-#' \code{window.history.replaceState(null, null, queryString)}.
-#' When \code{mode = "push"}, the function called is
-#' \code{window.history.pushState(null, null, queryString)}.
-#'
 #' @param queryString The new query string to show in the location bar.
-#' @param mode When the query string is updated, should the the current history
-#'   entry be replaced (default), or should a new history entry be pushed onto
-#'   the history stack? The former should only be used in a live bookmarking
-#'   context. The latter is useful if you want to navigate between states using
-#'   the browser's back and forward buttons. See Examples.
 #' @param session A Shiny session object.
-#' @seealso \code{\link{enableBookmarking}}, \code{\link{getQueryString}}
-#' @examples
-#' ## Only run these examples in interactive sessions
-#' if (interactive()) {
-#'
-#'   ## App 1: Doing "live" bookmarking
-#'   ## Update the browser's location bar every time an input changes.
-#'   ## This should not be used with enableBookmarking("server"),
-#'   ## because that would create a new saved state on disk every time
-#'   ## the user changes an input.
-#'   enableBookmarking("url")
-#'   shinyApp(
-#'     ui = function(req) {
-#'       fluidPage(
-#'         textInput("txt", "Text"),
-#'         checkboxInput("chk", "Checkbox")
-#'       )
-#'     },
-#'     server = function(input, output, session) {
-#'       observe({
-#'         # Trigger this observer every time an input changes
-#'         reactiveValuesToList(input)
-#'         session$doBookmark()
-#'       })
-#'       onBookmarked(function(url) {
-#'         updateQueryString(url)
-#'       })
-#'     }
-#'   )
-#'
-#'   ## App 2: Printing the value of the query string
-#'   ## (Use the back and forward buttons to see how the browser
-#'   ## keeps a record of each state)
-#'   shinyApp(
-#'     ui = fluidPage(
-#'       textInput("txt", "Enter new query string"),
-#'       helpText("Format: ?param1=val1&param2=val2"),
-#'       actionButton("go", "Update"),
-#'       hr(),
-#'       verbatimTextOutput("query")
-#'     ),
-#'     server = function(input, output, session) {
-#'       observeEvent(input$go, {
-#'         updateQueryString(input$txt, mode = "push")
-#'       })
-#'       output$query <- renderText({
-#'         query <- getQueryString()
-#'         queryText <- paste(names(query), query,
-#'                        sep = "=", collapse=", ")
-#'         paste("Your query string is:\n", queryText)
-#'       })
-#'     }
-#'   )
-#' }
+#' @seealso \code{\link{enableBookmarking}} for examples.
 #' @export
-updateQueryString <- function(queryString, mode = c("replace", "push"),
-                              session = getDefaultReactiveDomain()) {
-  mode <- match.arg(mode)
-  session$updateQueryString(queryString, mode)
+updateQueryString <- function(queryString, session = getDefaultReactiveDomain()) {
+  session$updateQueryString(queryString)
 }

 #' Create a button for bookmarking/sharing
--- a/R/bootstrap.R
+++ b/R/bootstrap.R
@@ -285,8 +285,7 @@ pageWithSidebar <- function(headerPanel,
 #'   example below).
 #'
 #' @seealso \code{\link{tabPanel}}, \code{\link{tabsetPanel}},
-#'   \code{\link{updateNavbarPage}}, \code{\link{insertTab}},
-#'   \code{\link{showTab}}
+#'   \code{\link{updateNavbarPage}}
 #'
 #' @examples
 #' navbarPage("App Title",
@@ -394,15 +393,10 @@ navbarPage <- function(title,
  )
 }

-#' @param menuName A name that identifies this \code{navbarMenu}. This
-#'   is needed if you want to insert/remove or show/hide an entire
-#'   \code{navbarMenu}.
-#'
 #' @rdname navbarPage
 #' @export
-navbarMenu <- function(title, ..., menuName = title, icon = NULL) {
+navbarMenu <- function(title, ..., icon = NULL) {
  structure(list(title = title,
-                 menuName = menuName,
                 tabs = list(...),
                 iconClass = iconClass(icon)),
            class = "shiny.navbarmenu")
@@ -508,8 +502,6 @@ mainPanel <- function(..., width = 8) {
 #'
 #' @param condition A JavaScript expression that will be evaluated repeatedly to
 #'   determine whether the panel should be displayed.
-#' @param ns The \code{\link[=NS]{namespace}} object of the current module, if
-#'   any.
 #' @param ... Elements to include in the panel.
 #'
 #' @note You are not recommended to use special JavaScript characters such as a
@@ -518,55 +510,32 @@ mainPanel <- function(..., width = 8) {
 #'   \code{input["foo.bar"]} instead of \code{input.foo.bar} to read the input
 #'   value.
 #' @examples
-#' ## Only run this example in interactive R sessions
-#' if (interactive()) {
-#'   ui <- fluidPage(
-#'     sidebarPanel(
-#'       selectInput("plotType", "Plot Type",
-#'         c(Scatter = "scatter", Histogram = "hist")
-#'       ),
-#'       # Only show this panel if the plot type is a histogram
+#' sidebarPanel(
+#'    selectInput(
+#'       "plotType", "Plot Type",
+#'       c(Scatter = "scatter",
+#'         Histogram = "hist")),
+#'
+#'    # Only show this panel if the plot type is a histogram
+#'    conditionalPanel(
+#'       condition = "input.plotType == 'hist'",
+#'       selectInput(
+#'          "breaks", "Breaks",
+#'          c("Sturges",
+#'            "Scott",
+#'            "Freedman-Diaconis",
+#'            "[Custom]" = "custom")),
+#'
+#'       # Only show this panel if Custom is selected
 #'       conditionalPanel(
-#'         condition = "input.plotType == 'hist'",
-#'         selectInput(
-#'           "breaks", "Breaks",
-#'           c("Sturges", "Scott", "Freedman-Diaconis", "[Custom]" = "custom")
-#'         ),
-#'         # Only show this panel if Custom is selected
-#'         conditionalPanel(
-#'           condition = "input.breaks == 'custom'",
-#'           sliderInput("breakCount", "Break Count", min = 1, max = 50, value = 10)
-#'         )
+#'          condition = "input.breaks == 'custom'",
+#'          sliderInput("breakCount", "Break Count", min=1, max=1000, value=10)
 #'       )
-#'     ),
-#'     mainPanel(
-#'       plotOutput("plot")
-#'     )
-#'   )
-#'
-#'   server <- function(input, output) {
-#'     x <- rnorm(100)
-#'     y <- rnorm(100)
-#'
-#'     output$plot <- renderPlot({
-#'       if (input$plotType == "scatter") {
-#'         plot(x, y)
-#'       } else {
-#'         breaks <- input$breaks
-#'         if (breaks == "custom") {
-#'           breaks <- input$breakCount
-#'         }
-#'
-#'         hist(x, breaks = breaks)
-#'       }
-#'     })
-#'   }
-#'
-#'   shinyApp(ui, server)
-#' }
+#'    )
+#' )
 #' @export
-conditionalPanel <- function(condition, ..., ns = NS(NULL)) {
-  div(`data-display-if`=condition, `data-ns-prefix`=ns(""), ...)
+conditionalPanel <- function(condition, ...) {
+  div('data-display-if'=condition, ...)
 }

 #' Create a help text element
@@ -640,8 +609,7 @@ tabPanel <- function(title, ..., value = title, icon = NULL) {
 #'   Bootstrap 3.
 #' @return A tabset that can be passed to \code{\link{mainPanel}}
 #'
-#' @seealso \code{\link{tabPanel}}, \code{\link{updateTabsetPanel}},
-#'   \code{\link{insertTab}}, \code{\link{showTab}}
+#' @seealso \code{\link{tabPanel}}, \code{\link{updateTabsetPanel}}
 #'
 #' @examples
 #' # Show a tabset that includes a plot, summary, and
@@ -708,9 +676,7 @@ tabsetPanel <- function(...,
 #'   supported. This is because version 0.11 switched to Bootstrap 3, which
 #'   doesn't support separators.
 #'
-#' @seealso \code{\link{tabPanel}}, \code{\link{updateNavlistPanel}},
-#'    \code{\link{insertTab}}, \code{\link{showTab}}
-#'
+#' @seealso \code{\link{tabPanel}}, \code{\link{updateNavlistPanel}}
 #' @examples
 #' fluidPage(
 #'
@@ -760,158 +726,189 @@ navlistPanel <- function(...,
    fixedRow(columns)
 }

-# Helpers to build tabsetPanels (& Co.) and their elements
-markTabAsSelected <- function(x) {
-  attr(x, "selected") <- TRUE
-  x
-}

-isTabSelected <- function(x) {
-  isTRUE(attr(x, "selected", exact = TRUE))
-}
+buildTabset <- function(tabs, ulClass, textFilter = NULL,
+                        id = NULL, selected = NULL) {

-containsSelectedTab <- function(tabs) {
-  any(vapply(tabs, isTabSelected, logical(1)))
-}
+  # This function proceeds in two phases. First, it scans over all the items
+  # to find and mark which tab should start selected. Then it actually builds
+  # the tab nav and tab content lists.

-findAndMarkSelectedTab <- function(tabs, selected, foundSelected) {
-  tabs <- lapply(tabs, function(div) {
-    if (foundSelected || is.character(div)) {
-      # Strings are not selectable items
+  # Mark an item as selected
+  markSelected <- function(x) {
+    attr(x, "selected") <- TRUE
+    x
+  }

-    } else if (inherits(div, "shiny.navbarmenu")) {
-      # Recur for navbarMenus
-      res <- findAndMarkSelectedTab(div$tabs, selected, foundSelected)
-      div$tabs <- res$tabs
-      foundSelected <<- res$foundSelected
+  # Returns TRUE if an item is selected
+  isSelected <- function(x) {
+    isTRUE(attr(x, "selected", exact = TRUE))
+  }
+
+  # Returns TRUE if a list of tab items contains a selected tab, FALSE
+  # otherwise.
+  containsSelected <- function(tabs) {
+    any(vapply(tabs, isSelected, logical(1)))
+  }
+
+  # Take a pass over all tabs, and mark the selected tab.
+  foundSelectedItem <- FALSE
+  findAndMarkSelected <- function(tabs, selected) {
+    lapply(tabs, function(divTag) {
+      if (foundSelectedItem) {
+        # If we already found the selected tab, no need to keep looking
+
+      } else if (is.character(divTag)) {
+        # Strings don't represent selectable items
+
+      } else if (inherits(divTag, "shiny.navbarmenu")) {
+        # Navbar menu
+        divTag$tabs <- findAndMarkSelected(divTag$tabs, selected)

-    } else {
-      # Base case: regular tab item. If the `selected` argument is
-      # provided, check for a match in the existing tabs; else,
-      # mark first available item as selected
-      if (is.null(selected)) {
-        foundSelected <<- TRUE
-        div <- markTabAsSelected(div)
      } else {
-        tabValue <- div$attribs$`data-value` %OR% div$attribs$title
-        if (identical(selected, tabValue)) {
-          foundSelected <<- TRUE
-          div <- markTabAsSelected(div)
+        # Regular tab item
+        if (is.null(selected)) {
+          # If selected tab isn't specified, mark first available item
+          # as selected.
+          foundSelectedItem <<- TRUE
+          divTag <- markSelected(divTag)
+
+        } else {
+          # If selected tab is specified, check for a match
+          tabValue <- divTag$attribs$`data-value` %OR% divTag$attribs$title
+          if (identical(selected, tabValue)) {
+            foundSelectedItem <<- TRUE
+            divTag <- markSelected(divTag)
+          }
        }
      }
-    }
-    return(div)
-  })
-  return(list(tabs = tabs, foundSelected = foundSelected))
-}

-# Returns the icon object (or NULL if none), provided either a
-# tabPanel, OR the icon class
-getIcon <- function(tab = NULL, iconClass = NULL) {
-  if (!is.null(tab)) iconClass <- tab$attribs$`data-icon-class`
-  if (!is.null(iconClass)) {
-    if (grepl("fa-", iconClass, fixed = TRUE)) {
+      return(divTag)
+    })
+  }
+
+
+  # Append an optional icon to an aTag
+  appendIcon <- function(aTag, iconClass) {
+    if (!is.null(iconClass)) {
      # for font-awesome we specify fixed-width
-      iconClass <- paste(iconClass, "fa-fw")
+      if (grepl("fa-", iconClass, fixed = TRUE))
+        iconClass <- paste(iconClass, "fa-fw")
+      aTag <- tagAppendChild(aTag, icon(name = NULL, class = iconClass))
    }
-    icon(name = NULL, class = iconClass)
-  } else NULL
-}
-
-# Text filter for navbarMenu's (plain text) separators
-navbarMenuTextFilter <- function(text) {
-  if (grepl("^\\-+$", text)) tags$li(class = "divider")
-  else tags$li(class = "dropdown-header", text)
-}
-
-# This function is called internally by navbarPage, tabsetPanel
-# and navlistPanel
-buildTabset <- function(tabs, ulClass, textFilter = NULL, id = NULL,
-                        selected = NULL, foundSelected = FALSE) {
-
-  res <- findAndMarkSelectedTab(tabs, selected, foundSelected)
-  tabs <- res$tabs
-  foundSelected <- res$foundSelected
-
-  # add input class if we have an id
-  if (!is.null(id)) ulClass <- paste(ulClass, "shiny-tab-input")
-
-  if (anyNamed(tabs)) {
-    nms <- names(tabs)
-    nms <- nms[nzchar(nms)]
-    stop("Tabs should all be unnamed arguments, but some are named: ",
-      paste(nms, collapse = ", "))
+    aTag
  }

-  tabsetId <- p_randomInt(1000, 10000)
-  tabs <- lapply(seq_len(length(tabs)), buildTabItem,
-            tabsetId = tabsetId, foundSelected = foundSelected,
-            tabs = tabs, textFilter = textFilter)
+  # Build the tabset
+  build <- function(tabs, ulClass, textFilter = NULL, id = NULL) {
+    # add tab input sentinel class if we have an id
+    if (!is.null(id))
+      ulClass <- paste(ulClass, "shiny-tab-input")

-  tabNavList <- tags$ul(class = ulClass, id = id,
-                  `data-tabsetid` = tabsetId, lapply(tabs, "[[", 1))
-
-  tabContent <- tags$div(class = "tab-content",
-                  `data-tabsetid` = tabsetId, lapply(tabs, "[[", 2))
-
-  list(navList = tabNavList, content = tabContent)
-}
-
-# Builds tabPanel/navbarMenu items (this function used to be
-# declared inside the buildTabset() function and it's been
-# refactored for clarity and reusability). Called internally
-# by buildTabset.
-buildTabItem <- function(index, tabsetId, foundSelected, tabs = NULL,
-                         divTag = NULL, textFilter = NULL) {
-
-  divTag <- if (!is.null(divTag)) divTag else tabs[[index]]
-
-  if (is.character(divTag) && !is.null(textFilter)) {
-    # text item: pass it to the textFilter if it exists
-    liTag <- textFilter(divTag)
-    divTag <- NULL
-
-  } else if (inherits(divTag, "shiny.navbarmenu")) {
-    # navbarMenu item: build the child tabset
-    tabset <- buildTabset(divTag$tabs, "dropdown-menu",
-      navbarMenuTextFilter, foundSelected = foundSelected)
-
-    # if this navbarMenu contains a selected item, mark it active
-    containsSelected <- containsSelectedTab(divTag$tabs)
-    liTag <- tags$li(
-      class = paste0("dropdown", if (containsSelected) " active"),
-      tags$a(href = "#",
-        class = "dropdown-toggle", `data-toggle` = "dropdown",
-        `data-value` = divTag$menuName,
-        divTag$title, tags$b(class = "caret"),
-        getIcon(iconClass = divTag$iconClass)
-      ),
-      tabset$navList   # inner tabPanels items
-    )
-    # list of tab content divs from the child tabset
-    divTag <- tabset$content$children
-
-  } else {
-    # tabPanel item: create the tab's liTag and divTag
-    tabId <- paste("tab", tabsetId, index, sep = "-")
-    liTag <- tags$li(
-               tags$a(
-                 href = paste("#", tabId, sep = ""),
-                 `data-toggle` = "tab",
-                 `data-value` = divTag$attribs$`data-value`,
-                 divTag$attribs$title,
-                 getIcon(iconClass = divTag$attribs$`data-icon-class`)
-               )
-    )
-    # if this tabPanel is selected item, mark it active
-    if (isTabSelected(divTag)) {
-      liTag$attribs$class <- "active"
-      divTag$attribs$class <- "tab-pane active"
+    if (anyNamed(tabs)) {
+      nms <- names(tabs)
+      nms <- nms[nzchar(nms)]
+      stop("Tabs should all be unnamed arguments, but some are named: ",
+           paste(nms, collapse = ", "))
    }
-    divTag$attribs$id <- tabId
-    divTag$attribs$title <- NULL
+
+    tabNavList <- tags$ul(class = ulClass, id = id)
+    tabContent <- tags$div(class = "tab-content")
+    tabsetId <- p_randomInt(1000, 10000)
+    tabId <- 1
+
+    buildItem <- function(divTag) {
+      # check for text; pass it to the textFilter or skip it if there is none
+      if (is.character(divTag)) {
+        if (!is.null(textFilter)) {
+          tabNavList <<- tagAppendChild(tabNavList, textFilter(divTag))
+        }
+
+      } else if (inherits(divTag, "shiny.navbarmenu")) {
+
+        # create the a tag
+        aTag <- tags$a(href="#",
+                       class="dropdown-toggle",
+                       `data-toggle`="dropdown")
+
+        # add optional icon
+        aTag <- appendIcon(aTag, divTag$iconClass)
+
+        # add the title and caret
+        aTag <- tagAppendChild(aTag, divTag$title)
+        aTag <- tagAppendChild(aTag, tags$b(class="caret"))
+
+        # build the dropdown list element
+        liTag <- tags$li(class = "dropdown", aTag)
+
+        # text filter for separators
+        textFilter <- function(text) {
+          if (grepl("^\\-+$", text))
+            tags$li(class="divider")
+          else
+            tags$li(class="dropdown-header", text)
+        }
+
+        # build the child tabset
+        tabset <- build(divTag$tabs, "dropdown-menu", textFilter)
+        liTag <- tagAppendChild(liTag, tabset$navList)
+
+        # If this navbar menu contains a selected item, mark it as active
+        if (containsSelected(divTag$tabs)) {
+          liTag$attribs$class <- paste(liTag$attribs$class, "active")
+        }
+
+        tabNavList <<- tagAppendChild(tabNavList, liTag)
+        # don't add a standard tab content div, rather add the list of tab
+        # content divs that are contained within the tabset
+        tabContent <<- tagAppendChildren(tabContent,
+                                        list = tabset$content$children)
+
+      } else {
+        # Standard navbar item
+        # compute id and assign it to the div
+        thisId <- paste("tab", tabsetId, tabId, sep="-")
+        divTag$attribs$id <- thisId
+        tabId <<- tabId + 1
+
+        tabValue <- divTag$attribs$`data-value`
+
+        # create the a tag
+        aTag <- tags$a(href=paste("#", thisId, sep=""),
+                       `data-toggle` = "tab",
+                       `data-value` = tabValue)
+
+        # append optional icon
+        aTag <- appendIcon(aTag, divTag$attribs$`data-icon-class`)
+
+        # add the title
+        aTag <- tagAppendChild(aTag, divTag$attribs$title)
+
+        # create the li tag
+        liTag <- tags$li(aTag)
+
+        # If selected, set appropriate classes on li tag and div tag.
+        if (isSelected(divTag)) {
+          liTag$attribs$class <- "active"
+          divTag$attribs$class <- "tab-pane active"
+        }
+
+        divTag$attribs$title <- NULL
+
+        # append the elements to our lists
+        tabNavList <<- tagAppendChild(tabNavList, liTag)
+        tabContent <<- tagAppendChild(tabContent, divTag)
+      }
+    }
+
+    lapply(tabs, buildItem)
+    list(navList = tabNavList, content = tabContent)
  }
-  return(list(liTag = liTag, divTag = divTag))
+
+
+  # Finally, actually invoke the functions to do the processing.
+  tabs <- findAndMarkSelected(tabs, selected)
+  build(tabs, ulClass, textFilter, id)
 }


@@ -1456,7 +1453,7 @@ uiOutput <- htmlOutput
 #' }
 #'
 #' @aliases downloadLink
-#' @seealso \code{\link{downloadHandler}}
+#' @seealso downloadHandler
 #' @export
 downloadButton <- function(outputId,
                           label="Download",
--- a/R/fileupload.R
+++ b/R/fileupload.R
@@ -20,18 +20,6 @@
 # form upload, i.e. traditional HTTP POST-based file upload) doesn't work with
 # the websockets package's HTTP server at the moment.

-# @description Returns a file's extension, with a leading dot, if one can be
-#   found. A valid extension contains only alphanumeric characters. If there is
-#   no extension, or if it contains non-alphanumeric characters, an empty
-#   string is returned.
-# @param x character vector giving file paths.
-# @return The extension of \code{x}, with a leading dot, if one was found.
-#   Otherwise, an empty character vector.
-maybeGetExtension <- function(x) {
-  ext <- tools::file_ext(x)
-  ifelse(ext == "", ext, paste0(".", ext))
-}
-
 FileUploadOperation <- R6Class(
  'FileUploadOperation',
  portable = FALSE,
@@ -64,9 +52,8 @@ FileUploadOperation <- R6Class(
      .currentFileInfo <<- file
      .pendingFileInfos <<- tail(.pendingFileInfos, -1)

-      fileBasename <- basename(.currentFileInfo$name)
-      filename <- file.path(.dir, paste0(as.character(length(.files$name)), maybeGetExtension(fileBasename)))
-      row <- data.frame(name=fileBasename, size=file$size, type=file$type,
+      filename <- file.path(.dir, as.character(length(.files$name)))
+      row <- data.frame(name=file$name, size=file$size, type=file$type,
                        datapath=filename, stringsAsFactors=FALSE)

      if (length(.files$name) == 0)
--- a/R/globals.R
+++ b/R/globals.R
@@ -5,7 +5,7 @@
  # R's lazy-loading package scheme causes the private seed to be cached in the
  # package itself, making our PRNG completely deterministic. This line resets
  # the private seed during load.
-  withPrivateSeed(set.seed(NULL))
+  withPrivateSeed(reinitializeSeed())
 }

 .onAttach <- function(libname, pkgname) {
--- a/R/history.R
+++ b/R/history.R
@@ -1,95 +0,0 @@
-
-#' @include reactive-domains.R
-NULL
-
-#' @include reactives.R
-NULL
-
-#' Get the query string / hash component from the URL
-#'
-#' Two user friendly wrappers for getting the query string and the hash
-#' component from the app's URL.
-#'
-#' These can be particularly useful if you want to display different content
-#' depending on the values in the query string / hash (e.g. instead of basing
-#' the conditional on an input or a calculated reactive, you can base it on the
-#' query string). However, note that, if you're changing the query string / hash
-#' programatically from within the server code, you must use
-#' \code{updateQueryString(_yourNewQueryString_, mode = "push")}. The default
-#' \code{mode} for \code{updateQueryString} is \code{"replace"}, which doesn't
-#' raise any events, so any observers or reactives that depend on it will
-#' \emph{not} get triggered. However, if you're changing the query string / hash
-#' directly by typing directly in the browser and hitting enter, you don't have
-#' to worry about this.
-#'
-#' @param session	A Shiny session object.
-#'
-#' @return For \code{getQueryString}, a named list. For example, the query
-#'   string \code{?param1=value1&param2=value2} becomes \code{list(param1 =
-#'   value1, param2 = value2)}. For \code{getUrlHash}, a character vector with
-#'   the hash (including the leading \code{#} symbol).
-#'
-#' @seealso \code{\link{updateQueryString}}
-#'
-#' @examples
-#' ## Only run this example in interactive R sessions
-#' if (interactive()) {
-#'
-#'   ## App 1: getQueryString
-#'   ## Printing the value of the query string
-#'   ## (Use the back and forward buttons to see how the browser
-#'   ## keeps a record of each state)
-#'   shinyApp(
-#'     ui = fluidPage(
-#'       textInput("txt", "Enter new query string"),
-#'       helpText("Format: ?param1=val1&param2=val2"),
-#'       actionButton("go", "Update"),
-#'       hr(),
-#'       verbatimTextOutput("query")
-#'     ),
-#'     server = function(input, output, session) {
-#'       observeEvent(input$go, {
-#'         updateQueryString(input$txt, mode = "push")
-#'       })
-#'       output$query <- renderText({
-#'         query <- getQueryString()
-#'         queryText <- paste(names(query), query,
-#'                        sep = "=", collapse=", ")
-#'         paste("Your query string is:\n", queryText)
-#'       })
-#'     }
-#'   )
-#'
-#'   ## App 2: getUrlHash
-#'   ## Printing the value of the URL hash
-#'   ## (Use the back and forward buttons to see how the browser
-#'   ## keeps a record of each state)
-#'   shinyApp(
-#'     ui = fluidPage(
-#'       textInput("txt", "Enter new hash"),
-#'       helpText("Format: #hash"),
-#'       actionButton("go", "Update"),
-#'       hr(),
-#'       verbatimTextOutput("hash")
-#'     ),
-#'     server = function(input, output, session) {
-#'       observeEvent(input$go, {
-#'         updateQueryString(input$txt, mode = "push")
-#'       })
-#'       output$hash <- renderText({
-#'         hash <- getUrlHash()
-#'         paste("Your hash is:\n", hash)
-#'       })
-#'     }
-#'   )
-#' }
-#' @export
-getQueryString <- function(session = getDefaultReactiveDomain()) {
-  parseQueryString(session$clientData$url_search)
-}
-
-#' @rdname getQueryString
-#' @export
-getUrlHash <- function(session = getDefaultReactiveDomain()) {
-  session$clientData$url_hash
-}
--- a/R/html-deps.R
+++ b/R/html-deps.R
@@ -6,18 +6,13 @@
 #' URL.
 #'
 #' @param dependency A single HTML dependency object, created using
-#'   \code{\link[htmltools]{htmlDependency}}. If the \code{src} value is named,
-#'   then \code{href} and/or \code{file} names must be present.
-#' @param scrubFile If TRUE (the default), remove \code{src$file} for the
-#'   dependency. This prevents the local file path from being sent to the client
-#'   when dynamic web dependencies are used. If FALSE, don't remove
-#'   \code{src$file}. Setting it to FALSE should be needed only in very unusual
-#'   cases.
+#'   \code{\link[htmltools]{htmlDependency}}. If the \code{src} value is named, then
+#'   \code{href} and/or \code{file} names must be present.
 #'
 #' @return A single HTML dependency object that has an \code{href}-named element
 #'   in its \code{src}.
 #' @export
-createWebDependency <- function(dependency, scrubFile = TRUE) {
+createWebDependency <- function(dependency) {
  if (is.null(dependency))
    return(NULL)

@@ -30,10 +25,6 @@ createWebDependency <- function(dependency, scrubFile = TRUE) {
    dependency$src$href <- prefix
  }

-  # Don't leak local file path to client
-  if (scrubFile)
-    dependency$src$file <- NULL
-
  return(dependency)
 }

--- a/R/input-checkboxgroup.R
+++ b/R/input-checkboxgroup.R
@@ -6,22 +6,9 @@
 #'
 #' @inheritParams textInput
 #' @param choices List of values to show checkboxes for. If elements of the list
-#'   are named then that name rather than the value is displayed to the user. If
-#'   this argument is provided, then \code{choiceNames} and \code{choiceValues}
-#'   must not be provided, and vice-versa. The values should be strings; other
-#'   types (such as logicals and numbers) will be coerced to strings.
+#'   are named then that name rather than the value is displayed to the user.
 #' @param selected The values that should be initially selected, if any.
 #' @param inline If \code{TRUE}, render the choices inline (i.e. horizontally)
-#' @param choiceNames,choiceValues List of names and values, respectively,
-#'   that are displayed to the user in the app and correspond to the each
-#'   choice (for this reason, \code{choiceNames} and \code{choiceValues}
-#'   must have the same length). If either of these arguments is
-#'   provided, then the other \emph{must} be provided and \code{choices}
-#'   \emph{must not} be provided. The advantage of using both of these over
-#'   a named list for \code{choices} is that \code{choiceNames} allows any
-#'   type of UI object to be passed through (tag objects, icons, HTML code,
-#'   ...), instead of just simple text. See Examples.
-#'
 #' @return A list of HTML elements that can be added to a UI definition.
 #'
 #' @family input elements
@@ -39,52 +26,26 @@
 #'   tableOutput("data")
 #' )
 #'
-#' server <- function(input, output, session) {
+#' server <- function(input, output) {
 #'   output$data <- renderTable({
 #'     mtcars[, c("mpg", input$variable), drop = FALSE]
 #'   }, rownames = TRUE)
 #' }
 #'
 #' shinyApp(ui, server)
-#'
-#' ui <- fluidPage(
-#'   checkboxGroupInput("icons", "Choose icons:",
-#'     choiceNames =
-#'       list(icon("calendar"), icon("bed"),
-#'            icon("cog"), icon("bug")),
-#'     choiceValues =
-#'       list("calendar", "bed", "cog", "bug")
-#'   ),
-#'   textOutput("txt")
-#' )
-#'
-#' server <- function(input, output, session) {
-#'   output$txt <- renderText({
-#'     icons <- paste(input$icons, collapse = ", ")
-#'     paste("You chose", icons)
-#'   })
-#' }
-#'
-#' shinyApp(ui, server)
 #' }
 #' @export
-checkboxGroupInput <- function(inputId, label, choices = NULL, selected = NULL,
-  inline = FALSE, width = NULL, choiceNames = NULL, choiceValues = NULL) {
-
-  # keep backward compatibility with Shiny < 1.0.1 (see #1649)
-  if (is.null(choices) && is.null(choiceNames) && is.null(choiceValues)) {
-    choices <- character(0)
-  }
-
-  args <- normalizeChoicesArgs(choices, choiceNames, choiceValues)
+checkboxGroupInput <- function(inputId, label, choices, selected = NULL,
+  inline = FALSE, width = NULL) {

  selected <- restoreInput(id = inputId, default = selected)

-  # default value if it's not specified
-  if (!is.null(selected)) selected <- as.character(selected)
+  # resolve names
+  choices <- choicesWithNames(choices)
+  if (!is.null(selected))
+    selected <- validateSelected(selected, choices, inputId)

-  options <- generateOptions(inputId, selected, inline,
-    'checkbox', args$choiceNames, args$choiceValues)
+  options <- generateOptions(inputId, choices, selected, inline)

  divClass <- "form-group shiny-input-checkboxgroup shiny-input-container"
  if (inline)
--- a/R/input-daterange.R
+++ b/R/input-daterange.R
@@ -98,7 +98,7 @@ dateRangeInput <- function(inputId, label, start = NULL, end = NULL,
          class = "input-sm form-control",
          type = "text",
          `data-date-language` = language,
-          `data-date-week-start` = weekstart,
+          `data-date-weekstart` = weekstart,
          `data-date-format` = format,
          `data-date-start-view` = startview,
          `data-min-date` = min,
@@ -110,7 +110,7 @@ dateRangeInput <- function(inputId, label, start = NULL, end = NULL,
          class = "input-sm form-control",
          type = "text",
          `data-date-language` = language,
-          `data-date-week-start` = weekstart,
+          `data-date-weekstart` = weekstart,
          `data-date-format` = format,
          `data-date-start-view` = startview,
          `data-min-date` = min,
--- a/R/input-file.R
+++ b/R/input-file.R
@@ -27,9 +27,6 @@
 #'   Internet Explorer 9 and earlier.}
 #' @param accept A character vector of MIME types; gives the browser a hint of
 #'   what kind of files the server is expecting.
-#' @param buttonLabel The label used on the button. Can be text or an HTML tag
-#'   object.
-#' @param placeholder The text to show before a file has been uploaded.
 #'
 #' @examples
 #' ## Only run examples in interactive R sessions
@@ -73,7 +70,7 @@
 #' }
 #' @export
 fileInput <- function(inputId, label, multiple = FALSE, accept = NULL,
-  width = NULL, buttonLabel = "Browse...", placeholder = "No file selected") {
+  width = NULL) {

  restoredValue <- restoreInput(id = inputId, default = NULL)

@@ -108,12 +105,12 @@ fileInput <- function(inputId, label, multiple = FALSE, accept = NULL,
    div(class = "input-group",
      tags$label(class = "input-group-btn",
        span(class = "btn btn-default btn-file",
-          buttonLabel,
+          "Browse...",
          inputTag
        )
      ),
      tags$input(type = "text", class = "form-control",
-        placeholder = placeholder, readonly = "readonly"
+        placeholder = "No file selected", readonly = "readonly"
      )
    ),

--- a/R/input-radiobuttons.R
+++ b/R/input-radiobuttons.R
@@ -3,30 +3,19 @@
 #' Create a set of radio buttons used to select an item from a list.
 #'
 #' If you need to represent a "None selected" state, it's possible to default
-#' the radio buttons to have no options selected by using \code{selected =
-#' character(0)}. However, this is not recommended, as it gives the user no way
-#' to return to that state once they've made a selection. Instead, consider
-#' having the first of your choices be \code{c("None selected" = "")}.
+#' the radio buttons to have no options selected by using
+#' \code{selected = character(0)}. However, this is not recommended, as it gives
+#' the user no way to return to that state once they've made a selection.
+#' Instead, consider having the first of your choices be \code{c("None selected"
+#' = "")}.
 #'
 #' @inheritParams textInput
 #' @param choices List of values to select from (if elements of the list are
-#'   named then that name rather than the value is displayed to the user). If
-#'   this argument is provided, then \code{choiceNames} and \code{choiceValues}
-#'   must not be provided, and vice-versa. The values should be strings; other
-#'   types (such as logicals and numbers) will be coerced to strings.
-#' @param selected The initially selected value (if not specified then defaults
-#'   to the first value)
+#' named then that name rather than the value is displayed to the user)
+#' @param selected The initially selected value (if not specified then
+#' defaults to the first value)
 #' @param inline If \code{TRUE}, render the choices inline (i.e. horizontally)
 #' @return A set of radio buttons that can be added to a UI definition.
-#' @param choiceNames,choiceValues List of names and values, respectively, that
-#'   are displayed to the user in the app and correspond to the each choice (for
-#'   this reason, \code{choiceNames} and \code{choiceValues} must have the same
-#'   length). If either of these arguments is provided, then the other
-#'   \emph{must} be provided and \code{choices} \emph{must not} be provided. The
-#'   advantage of using both of these over a named list for \code{choices} is
-#'   that \code{choiceNames} allows any type of UI object to be passed through
-#'   (tag objects, icons, HTML code, ...), instead of just simple text. See
-#'   Examples.
 #'
 #' @family input elements
 #' @seealso \code{\link{updateRadioButtons}}
@@ -58,46 +47,27 @@
 #' }
 #'
 #' shinyApp(ui, server)
-#'
-#' ui <- fluidPage(
-#'   radioButtons("rb", "Choose one:",
-#'                choiceNames = list(
-#'                  icon("calendar"),
-#'                  HTML("<p style='color:red;'>Red Text</p>"),
-#'                  "Normal text"
-#'                ),
-#'                choiceValues = list(
-#'                  "icon", "html", "text"
-#'                )),
-#'   textOutput("txt")
-#' )
-#'
-#' server <- function(input, output) {
-#'   output$txt <- renderText({
-#'     paste("You chose", input$rb)
-#'   })
-#' }
-#'
-#' shinyApp(ui, server)
 #' }
 #' @export
-radioButtons <- function(inputId, label, choices = NULL, selected = NULL,
-  inline = FALSE, width = NULL, choiceNames = NULL, choiceValues = NULL) {
+radioButtons <- function(inputId, label, choices, selected = NULL,
+  inline = FALSE, width = NULL) {

-  args <- normalizeChoicesArgs(choices, choiceNames, choiceValues)
+  # resolve names
+  choices <- choicesWithNames(choices)

  selected <- restoreInput(id = inputId, default = selected)

  # default value if it's not specified
-  selected <- if (is.null(selected)) args$choiceValues[[1]] else as.character(selected)
-
+  selected <- if (is.null(selected)) choices[[1]] else {
+    validateSelected(selected, choices, inputId)
+  }
  if (length(selected) > 1) stop("The 'selected' argument must be of length 1")

-  options <- generateOptions(inputId, selected, inline,
-    'radio', args$choiceNames, args$choiceValues)
+  options <- generateOptions(inputId, choices, selected, inline, type = 'radio')

  divClass <- "form-group shiny-input-radiogroup shiny-input-container"
-  if (inline) divClass <- paste(divClass, "shiny-input-container-inline")
+  if (inline)
+    divClass <- paste(divClass, "shiny-input-container-inline")

  tags$div(id = inputId,
    style = if (!is.null(width)) paste0("width: ", validateCssUnit(width), ";"),
--- a/R/input-select.R
+++ b/R/input-select.R
@@ -5,7 +5,7 @@
 #'
 #' By default, \code{selectInput()} and \code{selectizeInput()} use the
 #' JavaScript library \pkg{selectize.js}
-#' (\url{https://github.com/selectize/selectize.js}) to instead of the basic
+#' (\url{https://github.com/brianreavis/selectize.js}) to instead of the basic
 #' select input element. To use the standard HTML select input element, use
 #' \code{selectInput()} with \code{selectize=FALSE}.
 #'
@@ -74,8 +74,8 @@
 #' }
 #' @export
 selectInput <- function(inputId, label, choices, selected = NULL,
-  multiple = FALSE, selectize = TRUE, width = NULL,
-  size = NULL) {
+                        multiple = FALSE, selectize = TRUE, width = NULL,
+                        size = NULL) {

  selected <- restoreInput(id = inputId, default = selected)

@@ -85,7 +85,7 @@ selectInput <- function(inputId, label, choices, selected = NULL,
  # default value if it's not specified
  if (is.null(selected)) {
    if (!multiple) selected <- firstChoice(choices)
-  } else selected <- as.character(selected)
+  } else selected <- validateSelected(selected, choices, inputId)

  if (!is.null(size) && selectize) {
    stop("'size' argument is incompatible with 'selectize=TRUE'.")
--- a/R/input-slider.R
+++ b/R/input-slider.R
@@ -164,21 +164,23 @@ sliderInput <- function(inputId, label, min, max, value, step = NULL,
    `data-grid` = ticks,
    `data-grid-num` = n_ticks,
    `data-grid-snap` = FALSE,
-    `data-prettify-separator` = sep,
-    `data-prettify-enabled` = (sep != ""),
    `data-prefix` = pre,
    `data-postfix` = post,
    `data-keyboard` = TRUE,
    `data-keyboard-step` = step / (max - min) * 100,
-    # This value is only relevant for range sliders; for non-range sliders it
-    # causes problems since ion.RangeSlider 2.1.2 (issue #1605).
-    `data-drag-interval` = if (length(value) > 1) dragRange,
+    `data-drag-interval` = dragRange,
    # The following are ignored by the ion.rangeSlider, but are used by Shiny.
    `data-data-type` = dataType,
    `data-time-format` = timeFormat,
    `data-timezone` = timezone
  ))

+  if (sep == "") {
+    sliderProps$`data-prettify-enabled` <- "0"
+  } else {
+    sliderProps$`data-prettify-separator` <- sep
+  }
+
  # Replace any TRUE and FALSE with "true" and "false"
  sliderProps <- lapply(sliderProps, function(x) {
    if (identical(x, TRUE)) "true"
@@ -218,7 +220,7 @@ sliderInput <- function(inputId, label, min, max, value, step = NULL,
  }

  dep <- list(
-    htmlDependency("ionrangeslider", "2.1.6", c(href="shared/ionrangeslider"),
+    htmlDependency("ionrangeslider", "2.1.2", c(href="shared/ionrangeslider"),
      script = "js/ion.rangeSlider.min.js",
      # ion.rangeSlider also needs normalize.css, which is already included in
      # Bootstrap.
--- a/R/input-utils.R
+++ b/R/input-utils.R
@@ -2,62 +2,45 @@ controlLabel <- function(controlName, label) {
  label %AND% tags$label(class = "control-label", `for` = controlName, label)
 }

-# This function takes in either a list or vector for `choices` (and
-# `choiceNames` and `choiceValues` are passed in as NULL) OR it takes
-# in a list or vector for both `choiceNames` and `choiceValues` (and
-# `choices` is passed as NULL) and returns a list of two elements:
-#    - `choiceNames` is a vector or list that holds the options names
-#      (each element can be arbitrary UI, or simple text)
-#    - `choiceValues` is a vector or list that holds the options values
-#       (each element must be simple text)
-normalizeChoicesArgs <- function(choices, choiceNames, choiceValues,
-  mustExist = TRUE) {
-  # if-else to check that either choices OR (choiceNames + choiceValues)
-  # were correctly provided
-  if (is.null(choices)) {
-    if (is.null(choiceNames) || is.null(choiceValues)) {
-      if (mustExist) {
-        stop("Please specify a non-empty vector for `choices` (or, ",
-             "alternatively, for both `choiceNames` AND `choiceValues`).")
-      } else {
-        if (is.null(choiceNames) && is.null(choiceValues)) {
-          # this is useful when we call this function from `updateInputOptions()`
-          # in which case, all three `choices`, `choiceNames` and `choiceValues`
-          # may legitimately be NULL
-          return(list(choiceNames = NULL, choiceValues = NULL))
-        } else {
-          stop("One of `choiceNames` or `choiceValues` was set to ",
-               "NULL, but either both or none should be NULL.")
-        }
-      }
-    }
-    if (length(choiceNames) != length(choiceValues)) {
-      stop("`choiceNames` and `choiceValues` must have the same length.")
-    }
-    if (anyNamed(choiceNames) || anyNamed(choiceValues)) {
-      stop("`choiceNames` and `choiceValues` must not be named.")
-    }
-  } else {
-    if (!is.null(choiceNames) || !is.null(choiceValues)) {
-      warning("Using `choices` argument; ignoring `choiceNames` and `choiceValues`.")
-    }
-    choices <- choicesWithNames(choices) # resolve names if not specified
-    choiceNames <- names(choices)
-    choiceValues <- unname(choices)
-  }

-  return(list(choiceNames = as.list(choiceNames),
-              choiceValues = as.list(as.character(choiceValues))))
+# Before shiny 0.9, `selected` refers to names/labels of `choices`; now it
+# refers to values. Below is a function for backward compatibility. It also
+# coerces the value to `character`.
+validateSelected <- function(selected, choices, inputId) {
+  # this line accomplishes two tings:
+  #   - coerces selected to character
+  #   - drops name, otherwise toJSON() keeps it too
+  selected <- as.character(selected)
+  # if you are using optgroups, you're using shiny > 0.10.0, and you should
+  # already know that `selected` must be a value instead of a label
+  if (needOptgroup(choices)) return(selected)
+
+  if (is.list(choices)) choices <- unlist(choices)
+
+  nms <- names(choices)
+  # labels and values are identical, no need to validate
+  if (identical(nms, unname(choices))) return(selected)
+  # when selected labels instead of values
+  i <- (selected %in% nms) & !(selected %in% choices)
+  if (any(i)) {
+    warnFun <- if (all(i)) {
+      # replace names with values
+      selected <- unname(choices[selected])
+      warning
+    } else stop  # stop when it is ambiguous (some labels == values)
+    warnFun("'selected' must be the values instead of names of 'choices' ",
+            "for the input '", inputId, "'")
+  }
+  selected
 }

+
 # generate options for radio buttons and checkbox groups (type = 'checkbox' or
 # 'radio')
-generateOptions <- function(inputId, selected, inline, type = 'checkbox',
-                            choiceNames, choiceValues,
-                            session = getDefaultReactiveDomain()) {
+generateOptions <- function(inputId, choices, selected, inline, type = 'checkbox') {
  # generate a list of <input type=? [checked] />
  options <- mapply(
-    choiceValues, choiceNames,
+    choices, names(choices),
    FUN = function(value, name) {
      inputTag <- tags$input(
        type = type, name = inputId, value = value
@@ -65,18 +48,14 @@ generateOptions <- function(inputId, selected, inline, type = 'checkbox',
      if (value %in% selected)
        inputTag$attribs$checked <- "checked"

-      # in case, the options include UI code other than text
-      # (arbitrary HTML using the tags() function or equivalent)
-      pd <- processDeps(name, session)
-
      # If inline, there's no wrapper div, and the label needs a class like
      # checkbox-inline.
      if (inline) {
-        tags$label(class = paste0(type, "-inline"), inputTag,
-                   tags$span(pd$html, pd$deps))
+        tags$label(class = paste0(type, "-inline"), inputTag, tags$span(name))
      } else {
-        tags$div(class = type, tags$label(inputTag,
-                 tags$span(pd$html, pd$deps)))
+        tags$div(class = type,
+          tags$label(inputTag, tags$span(name))
+        )
      }
    },
    SIMPLIFY = FALSE, USE.NAMES = FALSE
--- a/R/insert-tab.R
+++ b/R/insert-tab.R
@@ -1,325 +0,0 @@
-#' Dynamically insert/remove a tabPanel
-#'
-#' Dynamically insert or remove a \code{\link{tabPanel}} (or a
-#' \code{\link{navbarMenu}}) from an existing \code{\link{tabsetPanel}},
-#' \code{\link{navlistPanel}} or \code{\link{navbarPage}}.
-#'
-#' When you want to insert a new tab before or after an existing tab, you
-#' should use \code{insertTab}. When you want to prepend a tab (i.e. add a
-#' tab to the beginning of the \code{tabsetPanel}), use \code{prependTab}.
-#' When you want to append a tab (i.e. add a tab to the end of the
-#' \code{tabsetPanel}), use \code{appendTab}.
-#'
-#' For \code{navbarPage}, you can insert/remove conventional
-#' \code{tabPanel}s (whether at the top level or nested inside a
-#' \code{navbarMenu}), as well as an entire \code{\link{navbarMenu}}.
-#' For the latter case, \code{target} should be the \code{menuName} that
-#' you gave your \code{navbarMenu} when you first created it (by default,
-#' this is equal to the value of the \code{title} argument).
-#'
-#' @param inputId The \code{id} of the \code{tabsetPanel} (or
-#'   \code{navlistPanel} or \code{navbarPage}) into which \code{tab} will
-#'   be inserted/removed.
-#'
-#' @param tab The item to be added (must be created with \code{tabPanel},
-#'   or with \code{navbarMenu}).
-#'
-#' @param target If inserting: the \code{value} of an existing
-#'   \code{tabPanel}, next to which \code{tab} will be added.
-#'   If removing: the \code{value} of the \code{tabPanel} that
-#'   you want to remove. See Details if you want to insert next to/remove
-#'   an entire \code{navbarMenu} instead.
-#'
-#' @param position Should \code{tab} be added before or after the
-#'   \code{target} tab?
-#'
-#' @param select Should \code{tab} be selected upon being inserted?
-#'
-#' @param session The shiny session within which to call this function.
-#'
-#' @seealso \code{\link{showTab}}
-#'
-#' @examples
-#' ## Only run this example in interactive R sessions
-#' if (interactive()) {
-#'
-#' # example app for inserting/removing a tab
-#' ui <- fluidPage(
-#'   sidebarLayout(
-#'     sidebarPanel(
-#'       actionButton("add", "Add 'Dynamic' tab"),
-#'       actionButton("remove", "Remove 'Foo' tab")
-#'     ),
-#'     mainPanel(
-#'       tabsetPanel(id = "tabs",
-#'         tabPanel("Hello", "This is the hello tab"),
-#'         tabPanel("Foo", "This is the foo tab"),
-#'         tabPanel("Bar", "This is the bar tab")
-#'       )
-#'     )
-#'   )
-#' )
-#' server <- function(input, output, session) {
-#'   observeEvent(input$add, {
-#'     insertTab(inputId = "tabs",
-#'       tabPanel("Dynamic", "This a dynamically-added tab"),
-#'       target = "Bar"
-#'     )
-#'   })
-#'   observeEvent(input$remove, {
-#'     removeTab(inputId = "tabs", target = "Foo")
-#'   })
-#' }
-#'
-#' shinyApp(ui, server)
-#'
-#'
-#' # example app for prepending/appending a navbarMenu
-#' ui <- navbarPage("Navbar page", id = "tabs",
-#'   tabPanel("Home",
-#'     actionButton("prepend", "Prepend a navbarMenu"),
-#'     actionButton("append", "Append a navbarMenu")
-#'   )
-#' )
-#' server <- function(input, output, session) {
-#'   observeEvent(input$prepend, {
-#'     id <- paste0("Dropdown", input$prepend, "p")
-#'     prependTab(inputId = "tabs",
-#'       navbarMenu(id,
-#'         tabPanel("Drop1", paste("Drop1 page from", id)),
-#'         tabPanel("Drop2", paste("Drop2 page from", id)),
-#'         "------",
-#'         "Header",
-#'         tabPanel("Drop3", paste("Drop3 page from", id))
-#'       )
-#'     )
-#'   })
-#'   observeEvent(input$append, {
-#'     id <- paste0("Dropdown", input$append, "a")
-#'     appendTab(inputId = "tabs",
-#'       navbarMenu(id,
-#'         tabPanel("Drop1", paste("Drop1 page from", id)),
-#'         tabPanel("Drop2", paste("Drop2 page from", id)),
-#'         "------",
-#'         "Header",
-#'         tabPanel("Drop3", paste("Drop3 page from", id))
-#'       )
-#'     )
-#'   })
-#' }
-#'
-#' shinyApp(ui, server)
-#'
-#' }
-#' @export
-insertTab <- function(inputId, tab, target,
-                      position = c("before", "after"), select = FALSE,
-                      session = getDefaultReactiveDomain()) {
-  force(target)
-  force(select)
-  position <- match.arg(position)
-  inputId <- session$ns(inputId)
-
-  # Barbara -- August 2017
-  # Note: until now, the number of tabs in a tabsetPanel (or navbarPage
-  # or navlistPanel) was always fixed. So, an easy way to give an id to
-  # a tab was simply incrementing a counter. (Just like it was easy to
-  # give a random 4-digit number to identify the tabsetPanel). Since we
-  # can only know this in the client side, we'll just pass `id` and
-  # `tsid` (TabSetID) as dummy values that will be fixed in the JS code.
-  item <- buildTabItem("id", "tsid", TRUE, divTag = tab,
-    textFilter = if (is.character(tab)) navbarMenuTextFilter else NULL)
-
-  callback <- function() {
-    session$sendInsertTab(
-      inputId = inputId,
-      liTag = processDeps(item$liTag, session),
-      divTag = processDeps(item$divTag, session),
-      menuName = NULL,
-      target = target,
-      position = position,
-      select = select)
-  }
-  session$onFlush(callback, once = TRUE)
-}
-
-#' @param menuName This argument should only be used when you want to
-#'   prepend (or append) \code{tab} to the beginning (or end) of an
-#'   existing \code{\link{navbarMenu}} (which must itself be part of
-#'   an existing \code{\link{navbarPage}}). In this case, this argument
-#'   should be the \code{menuName} that you gave your \code{navbarMenu}
-#'   when you first created it (by default, this is equal to the value
-#'   of the \code{title} argument). Note that you still need to set the
-#'   \code{inputId} argument to whatever the \code{id} of the parent
-#'   \code{navbarPage} is. If \code{menuName} is left as \code{NULL},
-#'   \code{tab} will be prepended (or appended) to whatever
-#'   \code{inputId} is.
-#'
-#' @rdname insertTab
-#' @export
-prependTab <- function(inputId, tab, select = FALSE, menuName = NULL,
-                       session = getDefaultReactiveDomain()) {
-  force(select)
-  force(menuName)
-  inputId <- session$ns(inputId)
-
-  item <- buildTabItem("id", "tsid", TRUE, divTag = tab,
-    textFilter = if (is.character(tab)) navbarMenuTextFilter else NULL)
-
-  callback <- function() {
-    session$sendInsertTab(
-      inputId = inputId,
-      liTag = processDeps(item$liTag, session),
-      divTag = processDeps(item$divTag, session),
-      menuName = menuName,
-      target = NULL,
-      position = "after",
-      select = select)
-  }
-  session$onFlush(callback, once = TRUE)
-}
-
-#' @rdname insertTab
-#' @export
-appendTab <- function(inputId, tab, select = FALSE, menuName = NULL,
-                      session = getDefaultReactiveDomain()) {
-  force(select)
-  force(menuName)
-  inputId <- session$ns(inputId)
-
-  item <- buildTabItem("id", "tsid", TRUE, divTag = tab,
-    textFilter = if (is.character(tab)) navbarMenuTextFilter else NULL)
-
-  callback <- function() {
-    session$sendInsertTab(
-      inputId = inputId,
-      liTag = processDeps(item$liTag, session),
-      divTag = processDeps(item$divTag, session),
-      menuName = menuName,
-      target = NULL,
-      position = "before",
-      select = select)
-  }
-  session$onFlush(callback, once = TRUE)
-}
-
-#' @rdname insertTab
-#' @export
-removeTab <- function(inputId, target,
-                      session = getDefaultReactiveDomain()) {
-  force(target)
-  inputId <- session$ns(inputId)
-
-  callback <- function() {
-    session$sendRemoveTab(
-      inputId = inputId,
-      target = target)
-  }
-  session$onFlush(callback, once = TRUE)
-}
-
-
-#' Dynamically hide/show a tabPanel
-#'
-#' Dynamically hide or show a \code{\link{tabPanel}} (or a
-#' \code{\link{navbarMenu}})from an existing \code{\link{tabsetPanel}},
-#' \code{\link{navlistPanel}} or \code{\link{navbarPage}}.
-#'
-#' For \code{navbarPage}, you can hide/show conventional
-#' \code{tabPanel}s (whether at the top level or nested inside a
-#' \code{navbarMenu}), as well as an entire \code{\link{navbarMenu}}.
-#' For the latter case, \code{target} should be the \code{menuName} that
-#' you gave your \code{navbarMenu} when you first created it (by default,
-#' this is equal to the value of the \code{title} argument).
-#'
-#' @param inputId The \code{id} of the \code{tabsetPanel} (or
-#'   \code{navlistPanel} or \code{navbarPage}) in which to find
-#'   \code{target}.
-#'
-#' @param target The \code{value} of the \code{tabPanel} to be
-#'   hidden/shown. See Details if you want to hide/show an entire
-#'   \code{navbarMenu} instead.
-#'
-#' @param select Should \code{target} be selected upon being shown?
-#'
-#' @param session The shiny session within which to call this function.
-#'
-#' @seealso \code{\link{insertTab}}
-#'
-#' @examples
-#' ## Only run this example in interactive R sessions
-#' if (interactive()) {
-#'
-#' ui <- navbarPage("Navbar page", id = "tabs",
-#'   tabPanel("Home",
-#'     actionButton("hideTab", "Hide 'Foo' tab"),
-#'     actionButton("showTab", "Show 'Foo' tab"),
-#'     actionButton("hideMenu", "Hide 'More' navbarMenu"),
-#'     actionButton("showMenu", "Show 'More' navbarMenu")
-#'   ),
-#'   tabPanel("Foo", "This is the foo tab"),
-#'   tabPanel("Bar", "This is the bar tab"),
-#'   navbarMenu("More",
-#'     tabPanel("Table", "Table page"),
-#'     tabPanel("About", "About page"),
-#'     "------",
-#'     "Even more!",
-#'     tabPanel("Email", "Email page")
-#'   )
-#' )
-#'
-#' server <- function(input, output, session) {
-#'   observeEvent(input$hideTab, {
-#'     hideTab(inputId = "tabs", target = "Foo")
-#'   })
-#'
-#'   observeEvent(input$showTab, {
-#'     showTab(inputId = "tabs", target = "Foo")
-#'   })
-#'
-#'   observeEvent(input$hideMenu, {
-#'     hideTab(inputId = "tabs", target = "More")
-#'   })
-#'
-#'   observeEvent(input$showMenu, {
-#'     showTab(inputId = "tabs", target = "More")
-#'   })
-#' }
-#'
-#' shinyApp(ui, server)
-#' }
-#'
-#' @export
-showTab <- function(inputId, target, select = FALSE,
-                    session = getDefaultReactiveDomain()) {
-  force(target)
-
-  if (select) updateTabsetPanel(session, inputId, selected = target)
-  inputId <- session$ns(inputId)
-
-  callback <- function() {
-    session$sendChangeTabVisibility(
-      inputId = inputId,
-      target = target,
-      type = "show"
-    )
-  }
-  session$onFlush(callback, once = TRUE)
-}
-
-#' @rdname showTab
-#' @export
-hideTab <- function(inputId, target,
-                    session = getDefaultReactiveDomain()) {
-  force(target)
-  inputId <- session$ns(inputId)
-
-  callback <- function() {
-    session$sendChangeTabVisibility(
-      inputId = inputId,
-      target = target,
-      type = "hide"
-    )
-  }
-  session$onFlush(callback, once = TRUE)
-}
--- a/R/middleware-shiny.R
+++ b/R/middleware-shiny.R
@@ -41,3 +41,229 @@ sessionHandler <- function(req) {
    shinysession$handleRequest(subreq)
  })
 }
+
+apiHandler <- function(serverFuncSource) {
+  function(req) {
+    path <- req$PATH_INFO
+    if (is.null(path))
+      return(NULL)
+
+    matches <- regmatches(path, regexec('^/api/(.*)$', path))
+    if (length(matches[[1]]) == 0)
+      return(NULL)
+
+    apiName <- matches[[1]][2]
+
+    sharedSecret <- getOption('shiny.sharedSecret')
+    if (!is.null(sharedSecret)
+      && !identical(sharedSecret, req$HTTP_SHINY_SHARED_SECRET)) {
+      stop("Incorrect shared secret")
+    }
+
+    if (!is.null(getOption("shiny.observer.error", NULL))) {
+      warning(
+        call. = FALSE,
+        "options(shiny.observer.error) is no longer supported; please unset it!"
+      )
+      stopApp()
+    }
+
+    # need to give a fake websocket to the session
+    ws <- list(
+      request = req,
+      sendMessage = function(...) {
+        #print(list(...))
+      }
+    )
+
+    # Accept JSON query string and/or JSON body as input values
+    inputVals <- c(
+      parseQueryStringJSON(req$QUERY_STRING),
+      parseJSONBody(req)
+    )
+
+    shinysession <- ShinySession$new(ws)
+    on.exit({
+      try({
+        # Clean up the session. Very important, so that observers
+        # and such don't hang around, and to let memory get gc'd.
+        shinysession$wsClosed()
+        appsByToken$remove(shinysession$token)
+      })
+    }, add = TRUE)
+    appsByToken$set(shinysession$token, shinysession)
+    shinysession$setShowcase(.globals$showcaseDefault)
+
+    serverFunc <- withReactiveDomain(NULL, serverFuncSource())
+
+    tryCatch({
+      withReactiveDomain(shinysession, {
+        shinysession$manageInputs(inputVals)
+        do.call(serverFunc, argsForServerFunc(serverFunc, shinysession))
+        result <- NULL
+        shinysession$enableApi(apiName, function(value) {
+          result <<- try(withLogErrors(value), silent = TRUE)
+        })
+        flushReact()
+        resultToResponse(result)
+      })
+    }, error = function(e) {
+      return(httpResponse(
+        status=500,
+        content=htmlEscape(conditionMessage(e))
+      ))
+    })
+  }
+}
+
+apiWsHandler <- function(serverFuncSource) {
+  function(ws) {
+    path <- ws$request$PATH_INFO
+    if (is.null(path))
+      return(NULL)
+
+    matches <- regmatches(path, regexec('^/api/(.*)$', path))
+    if (length(matches[[1]]) == 0)
+      return(NULL)
+
+    apiName <- matches[[1]][2]
+
+    sharedSecret <- getOption('shiny.sharedSecret')
+    if (!is.null(sharedSecret)
+      && !identical(sharedSecret, ws$request$HTTP_SHINY_SHARED_SECRET)) {
+      ws$close()
+      return(TRUE)
+    }
+
+    if (!is.null(getOption("shiny.observer.error", NULL))) {
+      warning(
+        call. = FALSE,
+        "options(shiny.observer.error) is no longer supported; please unset it!"
+      )
+      stopApp()
+    }
+
+    inputVals <- parseQueryStringJSON(ws$request$QUERY_STRING)
+
+    # Give a fake websocket to suppress messages from session
+    shinysession <- ShinySession$new(list(
+      request = ws$request,
+      sendMessage = function(...) {
+        #print(list(...))
+      }
+    ))
+    appsByToken$set(shinysession$token, shinysession)
+    shinysession$setShowcase(.globals$showcaseDefault)
+
+    serverFunc <- withReactiveDomain(NULL, serverFuncSource())
+
+    tryCatch({
+      withReactiveDomain(shinysession, {
+        shinysession$manageInputs(inputVals)
+        do.call(serverFunc, argsForServerFunc(serverFunc, shinysession))
+        shinysession$enableApi(apiName, function(value) {
+          resp <- resultToResponse(value)
+          if (resp$status != 200L) {
+            warning("Error: ", responseToContent(resp))
+            ws$close()
+          } else {
+            content <- responseToContent(resp)
+            if (grepl("^image/", resp$content_type)) {
+              content <- paste0("data:", resp$content_type, ";base64,",
+                httpuv::rawToBase64(content))
+            }
+            try(ws$send(content), silent=TRUE)
+          }
+        })
+        flushReact()
+      })
+    }, error = function(e) {
+      ws$close()
+    })
+
+    ws$onClose(function() {
+      # Clean up the session. Very important, so that observers
+      # and such don't hang around, and to let memory get gc'd.
+      shinysession$wsClosed()
+      appsByToken$remove(shinysession$token)
+    })
+
+    # TODO: What to do on ws$onMessage?
+  }
+}
+
+parseJSONBody <- function(req) {
+  if (identical(req[["REQUEST_METHOD"]], "POST")) {
+    if (isTRUE(grepl(perl=TRUE, "^(text|application)/json(;\\s*charset\\s*=\\s*utf-8)?$", req[["HTTP_CONTENT_TYPE"]]))) {
+      tmp <- file("", "w+b")
+      on.exit(close(tmp))
+
+      input_file <- req[["rook.input"]]
+      while (TRUE) {
+        chunk <- input_file$read(8192L)
+        if (length(chunk) == 0)
+          break
+        writeBin(chunk, tmp)
+      }
+
+      return(jsonlite::fromJSON(tmp))
+    }
+
+    if (is.null(req[["HTTP_CONTENT_TYPE"]])) {
+      if (!is.null(req[["rook.input"]]) && length(req[["rook.input"]]$read(1L)) > 0) {
+        stop("Invalid POST request (body provided without content type)")
+      }
+      return()
+    }
+
+    stop("Invalid POST request (content type not supported)")
+  }
+}
+
+resultToResponse <- function(result) {
+  if (inherits(result, "httpResponse")) {
+    return(result)
+  } else if (inherits(result, "try-error")) {
+    return(httpResponse(
+      status=500,
+      content_type="text/plain",
+      content=conditionMessage(attr(result, "condition"))
+    ))
+  } else if (!is.null(attr(result, "content.type"))) {
+    return(httpResponse(
+      status=200L,
+      content_type=attr(result, "content.type"),
+      content=result
+    ))
+  } else {
+    return(httpResponse(
+      status=200L,
+      content_type="application/json",
+      content=toJSON(result, pretty=TRUE)
+    ))
+  }
+}
+
+responseToContent <- function(result) {
+  ct <- result$content_type
+  textMode <- grepl("^text/", ct) || ct == "application/json" ||
+    grepl("^application/xml($|\\+)", ct)
+
+  # TODO: Make sure text is UTF-8
+
+  if ("file" %in% names(result$content)) {
+    filename <- result$content$file
+    if ("owned" %in% names(result$content) && result$content$owned) {
+      on.exit(unlink(filename), add = TRUE)
+    }
+    if (textMode)
+      return(paste(readLines(filename), collapse = "\n"))
+    else
+      return(readBin(filename, raw(), file.info(filename)$size))
+  } else {
+    if (textMode)
+      return(paste(result$content, collapse = "\n"))
+    else
+      return(result$content)
+  }
+}
--- a/R/middleware.R
+++ b/R/middleware.R
@@ -191,7 +191,7 @@ staticHandler <- function(root) {
    if (!identical(req$REQUEST_METHOD, 'GET'))
      return(NULL)

-    path <- URLdecode(req$PATH_INFO)
+    path <- req$PATH_INFO

    if (is.null(path))
      return(httpResponse(400, content="<h1>Bad Request</h1>"))
@@ -360,9 +360,7 @@ HandlerManager <- R6Class("HandlerManager",

          response <- filter(req, response)
          if (head_request) {
-
-            headers$`Content-Length` <- getResponseContentLength(response, deleteOwnedContent = TRUE)
-
+            headers$`Content-Length` <- nchar(response$content, type = "bytes")
            return(list(
              status = response$status,
              body = "",
@@ -385,35 +383,6 @@ HandlerManager <- R6Class("HandlerManager",
  )
 )

-# Safely get the Content-Length of a Rook response, or NULL if the length cannot
-# be determined for whatever reason (probably malformed response$content).
-# If deleteOwnedContent is TRUE, then the function should delete response
-# content that is of the form list(file=..., owned=TRUE).
-getResponseContentLength <- function(response, deleteOwnedContent) {
-  force(deleteOwnedContent)
-
-  result <- if (is.character(response$content) && length(response$content) == 1) {
-    nchar(response$content, type = "bytes")
-  } else if (is.raw(response$content)) {
-    length(response$content)
-  } else if (is.list(response$content) && !is.null(response$content$file)) {
-    if (deleteOwnedContent && isTRUE(response$content$owned)) {
-      on.exit(unlink(response$content$file, recursive = FALSE, force = FALSE), add = TRUE)
-    }
-    file.info(response$content$file)$size
-  } else {
-    warning("HEAD request for unexpected content class ", class(response$content)[[1]])
-    NULL
-  }
-
-  if (is.na(result)) {
-    # Mostly for missing file case
-    return(NULL)
-  } else {
-    return(result)
-  }
-}
-
 #
 # ## Next steps
 #
--- a/R/modules.R
+++ b/R/modules.R
@@ -26,11 +26,6 @@ createSessionProxy <- function(parentSession, ...) {

 #' @export
 `$<-.session_proxy` <- function(x, name, value) {
-  # this line allows users to write into session$userData
-  # (e.g. it allows something like `session$userData$x <- TRUE`,
-  # but not `session$userData <- TRUE`) from within a module
-  # without any hacks (see PR #1732)
-  if (identical(x[[name]], value)) return(x)
  stop("Attempted to assign value on session proxy.")
 }

--- a/R/progress.R
+++ b/R/progress.R
@@ -55,6 +55,7 @@
 #'   de-emphasized appearance relative to \code{message}.
 #' @param value A numeric value at which to set
 #'   the progress bar, relative to \code{min} and \code{max}.
+#'   \code{NULL} hides the progress bar, if it is currently visible.
 #' @param style Progress display style. If \code{"notification"} (the default),
 #'   the progress indicator will show using Shiny's notification API. If
 #'   \code{"old"}, use the same HTML and CSS used in Shiny 0.13.2 and below
@@ -97,6 +98,7 @@
 #' @export
 Progress <- R6Class(
  'Progress',
+  portable = TRUE,
  public = list(

    initialize = function(session = getDefaultReactiveDomain(),
@@ -110,8 +112,8 @@ Progress <- R6Class(
      private$id <- createUniqueId(8)
      private$min <- min
      private$max <- max
-      private$value <- NULL
      private$style <- match.arg(style, choices = c("notification", "old"))
+      private$value <- NULL
      private$closed <- FALSE

      session$sendProgress('open', list(id = private$id, style = private$style))
@@ -123,15 +125,15 @@ Progress <- R6Class(
        return()
      }

-      if (is.null(value) || is.na(value))
+      if (is.null(value) || is.na(value)) {
        value <- NULL
-
-      if (!is.null(value)) {
-        private$value <- value
+      } else {
        # Normalize value to number between 0 and 1
        value <- min(1, max(0, (value - private$min) / (private$max - private$min)))
      }

+      private$value <- value
+
      data <- dropNulls(list(
        id = private$id,
        message = message,
@@ -140,14 +142,11 @@ Progress <- R6Class(
        style = private$style
      ))

-      private$session$sendProgress('update', data)
+       private$session$sendProgress('update', data)
    },

    inc = function(amount = 0.1, message = NULL, detail = NULL) {
-      if (is.null(private$value))
-        private$value <- private$min
-
-      value <- min(private$value + amount, private$max)
+      value <- min(self$getValue() + amount, private$max)
      self$set(value, message, detail)
    },

@@ -155,7 +154,10 @@ Progress <- R6Class(

    getMax = function() private$max,

-    getValue = function() private$value,
+    # Return value (not the normalized 0-1 value, but in the original range)
+    getValue = function() {
+      private$value * (private$max - private$min) + private$min
+    },

    close = function() {
      if (private$closed) {
@@ -171,12 +173,12 @@ Progress <- R6Class(
  ),

  private = list(
-    session = 'ShinySession',
+    session = 'environment',
    id = character(0),
    min = numeric(0),
    max = numeric(0),
    style = character(0),
-    value = numeric(0),
+    value = NULL,
    closed = logical(0)
  )
 )
@@ -237,7 +239,8 @@ Progress <- R6Class(
 #'   \code{"old"}, use the same HTML and CSS used in Shiny 0.13.2 and below
 #'   (this is for backward-compatibility).
 #' @param value Single-element numeric vector; the value at which to set the
-#'   progress bar, relative to \code{min} and \code{max}.
+#'   progress bar, relative to \code{min} and \code{max}. \code{NULL} hides the
+#'   progress bar, if it is currently visible.
 #'
 #' @examples
 #' ## Only run examples in interactive R sessions
--- a/R/reactives.R
+++ b/R/reactives.R
@@ -38,229 +38,6 @@ Dependents <- R6Class(
 )


-# ReactiveVal ---------------------------------------------------------------
-
-ReactiveVal <- R6Class(
-  'ReactiveVal',
-  portable = FALSE,
-  private = list(
-    value = NULL,
-    label = NULL,
-    frozen = FALSE,
-    dependents = NULL
-  ),
-  public = list(
-    initialize = function(value, label = NULL) {
-      private$value <- value
-      private$label <- label
-      private$dependents <- Dependents$new()
-      .graphValueChange(private$label, value)
-    },
-    get = function() {
-      private$dependents$register(depLabel = private$label)
-
-      if (private$frozen)
-        reactiveStop()
-
-      private$value
-    },
-    set = function(value) {
-      if (identical(private$value, value)) {
-        return(invisible(FALSE))
-      }
-      private$value <- value
-      .graphValueChange(private$label, value)
-      private$dependents$invalidate()
-      invisible(TRUE)
-    },
-    freeze = function(session = getDefaultReactiveDomain()) {
-      if (is.null(session)) {
-        stop("Can't freeze a reactiveVal without a reactive domain")
-      }
-      session$onFlushed(function() {
-        self$thaw()
-      })
-      private$frozen <- TRUE
-    },
-    thaw = function() {
-      private$frozen <- FALSE
-    },
-    isFrozen = function() {
-      private$frozen
-    },
-    format = function(...) {
-      # capture.output(print()) is necessary because format() doesn't
-      # necessarily return a character vector, e.g. data.frame.
-      label <- capture.output(print(base::format(private$value, ...)))
-      if (length(label) == 1) {
-        paste0("reactiveVal: ", label)
-      } else {
-        c("reactiveVal:", label)
-      }
-    }
-  )
-)
-
-#' Create a (single) reactive value
-#'
-#' The \code{reactiveVal} function is used to construct a "reactive value"
-#' object. This is an object used for reading and writing a value, like a
-#' variable, but with special capabilities for reactive programming. When you
-#' read the value out of a reactiveVal object, the calling reactive expression
-#' takes a dependency, and when you change the value, it notifies any reactives
-#' that previously depended on that value.
-#'
-#' \code{reactiveVal} is very similar to \code{\link{reactiveValues}}, except
-#' that the former is for a single reactive value (like a variable), whereas the
-#' latter lets you conveniently use multiple reactive values by name (like a
-#' named list of variables). For a one-off reactive value, it's more natural to
-#' use \code{reactiveVal}. See the Examples section for an illustration.
-#'
-#' @param value An optional initial value.
-#' @param label An optional label, for debugging purposes (see
-#'   \code{\link{showReactLog}}). If missing, a label will be automatically
-#'   created.
-#'
-#' @return A function. Call the function with no arguments to (reactively) read
-#'   the value; call the function with a single argument to set the value.
-#'
-#' @examples
-#'
-#' \dontrun{
-#'
-#' # Create the object by calling reactiveVal
-#' r <- reactiveVal()
-#'
-#' # Set the value by calling with an argument
-#' r(10)
-#'
-#' # Read the value by calling without arguments
-#' r()
-#'
-#' }
-#'
-#' ## Only run examples in interactive R sessions
-#' if (interactive()) {
-#'
-#' ui <- fluidPage(
-#'   actionButton("minus", "-1"),
-#'   actionButton("plus", "+1"),
-#'   br(),
-#'   textOutput("value")
-#' )
-#'
-#' # The comments below show the equivalent logic using reactiveValues()
-#' server <- function(input, output, session) {
-#'   value <- reactiveVal(0)       # rv <- reactiveValues(value = 0)
-#'
-#'   observeEvent(input$minus, {
-#'     newValue <- value() - 1     # newValue <- rv$value - 1
-#'     value(newValue)             # rv$value <- newValue
-#'   })
-#'
-#'   observeEvent(input$plus, {
-#'     newValue <- value() + 1     # newValue <- rv$value + 1
-#'     value(newValue)             # rv$value <- newValue
-#'   })
-#'
-#'   output$value <- renderText({
-#'     value()                     # rv$value
-#'   })
-#' }
-#'
-#' shinyApp(ui, server)
-#'
-#' }
-#'
-#' @export
-reactiveVal <- function(value = NULL, label = NULL) {
-  if (missing(label)) {
-    call <- sys.call()
-    label <- rvalSrcrefToLabel(attr(call, "srcref", exact = TRUE))
-  }
-
-  rv <- ReactiveVal$new(value, label)
-  structure(
-    function(x) {
-      if (missing(x)) {
-        rv$get()
-      } else {
-        force(x)
-        rv$set(x)
-      }
-    },
-    class = c("reactiveVal", "reactive"),
-    label = label,
-    .impl = rv
-  )
-}
-
-#' @rdname freezeReactiveValue
-#' @export
-freezeReactiveVal <- function(x) {
-  domain <- getDefaultReactiveDomain()
-  if (is.null(domain)) {
-    stop("freezeReactiveVal() must be called when a default reactive domain is active.")
-  }
-  if (!inherits(x, "reactiveVal")) {
-    stop("x must be a reactiveVal object")
-  }
-
-  attr(x, ".impl", exact = TRUE)$freeze(domain)
-  invisible()
-}
-
-#' @export
-format.reactiveVal <- function(x, ...) {
-  attr(x, ".impl", exact = TRUE)$format(...)
-}
-
-# Attempts to extract the variable name that the reactiveVal object is being
-# assigned to (e.g. for `a <- reactiveVal()`, the result should be "a"). This
-# is a fragile, error-prone operation, so we default to a random label if
-# necessary.
-rvalSrcrefToLabel <- function(srcref,
-  defaultLabel = paste0("reactiveVal", createUniqueId(4))) {
-
-  if (is.null(srcref))
-    return(defaultLabel)
-
-  srcfile <- attr(srcref, "srcfile", exact = TRUE)
-  if (is.null(srcfile))
-    return(defaultLabel)
-
-  if (is.null(srcfile$lines))
-    return(defaultLabel)
-
-  lines <- srcfile$lines
-  # When pasting at the Console, srcfile$lines is not split
-  if (length(lines) == 1) {
-    lines <- strsplit(lines, "\n")[[1]]
-  }
-
-  if (length(lines) < srcref[1]) {
-    return(defaultLabel)
-  }
-
-  firstLine <- substring(lines[srcref[1]], srcref[2] - 1)
-
-  m <- regexec("\\s*([^[:space:]]+)\\s*(<-|=)\\s*reactiveVal\\b", firstLine)
-  if (m[[1]][1] == -1) {
-    return(defaultLabel)
-  }
-
-  sym <- regmatches(firstLine, m)[[1]][2]
-  res <- try(parse(text = sym), silent = TRUE)
-  if (inherits(res, "try-error"))
-    return(defaultLabel)
-
-  if (length(res) != 1)
-    return(defaultLabel)
-
-  return(as.character(res))
-}
-
-
 # ReactiveValues ------------------------------------------------------------

 ReactiveValues <- R6Class(
@@ -620,17 +397,14 @@ str.reactivevalues <- function(object, indent.str = " ", ...) {

 #' Freeze a reactive value
 #'
-#' These functions freeze a \code{\link{reactiveVal}}, or an element of a
-#' \code{\link{reactiveValues}}. If the value is accessed while frozen, a
+#' This freezes a reactive value. If the value is accessed while frozen, a
 #' "silent" exception is raised and the operation is stopped. This is the same
 #' thing that happens if \code{req(FALSE)} is called. The value is thawed
 #' (un-frozen; accessing it will no longer raise an exception) when the current
 #' reactive domain is flushed. In a Shiny application, this occurs after all of
 #' the observers are executed.
 #'
-#' @param x For \code{freezeReactiveValue}, a \code{\link{reactiveValues}}
-#'   object (like \code{input}); for \code{freezeReactiveVal}, a
-#'   \code{\link{reactiveVal}} object.
+#' @param x A \code{\link{reactiveValues}} object (like \code{input}).
 #' @param name The name of a value in the \code{\link{reactiveValues}} object.
 #'
 #' @seealso \code{\link{req}}
@@ -672,7 +446,7 @@ str.reactivevalues <- function(object, indent.str = " ", ...) {
 #' @export
 freezeReactiveValue <- function(x, name) {
  domain <- getDefaultReactiveDomain()
-  if (is.null(domain)) {
+  if (is.null(getDefaultReactiveDomain)) {
    stop("freezeReactiveValue() must be called when a default reactive domain is active.")
  }

@@ -687,7 +461,6 @@ Observable <- R6Class(
  'Observable',
  portable = FALSE,
  public = list(
-    .origFunc = 'function',
    .func = 'function',
    .label = character(0),
    .domain = NULL,
@@ -717,7 +490,6 @@ Observable <- R6Class(
        funcLabel <- paste0("<reactive:", label, ">")
      }

-      .origFunc <<- func
      .func <<- wrapFunctionLabel(func, funcLabel,
        ..stacktraceon = ..stacktraceon)
      .label <<- label
@@ -748,10 +520,6 @@ Observable <- R6Class(
      else
        invisible(.value)
    },
-    format = function() {
-      label <- sprintf('reactive(%s)', paste(deparse(body(.origFunc)), collapse='\n'))
-      strsplit(label, "\n")[[1]]
-    },
    .updateValue = function() {
      ctx <- Context$new(.domain, .label, type = 'observable',
                         prevId = .mostRecentCtxId)
@@ -861,13 +629,13 @@ reactive <- function(x, env = parent.frame(), quoted = FALSE, label = NULL,
  # Attach a label and a reference to the original user source for debugging
  srcref <- attr(substitute(x), "srcref", exact = TRUE)
  if (is.null(label)) {
-    label <- rexprSrcrefToLabel(srcref[[1]],
+    label <- srcrefToLabel(srcref[[1]],
      sprintf('reactive(%s)', paste(deparse(body(fun)), collapse='\n')))
  }
  if (length(srcref) >= 2) attr(label, "srcref") <- srcref[[2]]
  attr(label, "srcfile") <- srcFileOfRef(srcref[[1]])
  o <- Observable$new(fun, label, domain, ..stacktraceon = ..stacktraceon)
-  structure(o$getValue, observable = o, class = c("reactiveExpr", "reactive"))
+  structure(o$getValue, observable = o, class = "reactive")
 }

 # Given the srcref to a reactive expression, attempts to figure out what the
@@ -875,7 +643,7 @@ reactive <- function(x, env = parent.frame(), quoted = FALSE, label = NULL,
 # scans the line of code that started the reactive block and looks for something
 # that looks like assignment. If we fail, fall back to a default value (likely
 # the block of code in the body of the reactive).
-rexprSrcrefToLabel <- function(srcref, defaultLabel) {
+srcrefToLabel <- function(srcref, defaultLabel) {
  if (is.null(srcref))
    return(defaultLabel)

@@ -913,25 +681,19 @@ rexprSrcrefToLabel <- function(srcref, defaultLabel) {
  return(as.character(res))
 }

-#' @export
-format.reactiveExpr <- function(x, ...) {
-  attr(x, "observable", exact = TRUE)$format()
-}
-
 #' @export
 print.reactive <- function(x, ...) {
-  cat(paste(format(x), collapse = "\n"), "\n")
+  label <- attr(x, "observable", exact = TRUE)$.label
+  cat(label, "\n")
 }

 #' @export
 #' @rdname reactive
-is.reactive <- function(x) {
-  inherits(x, "reactive")
-}
+is.reactive <- function(x) inherits(x, "reactive")

 # Return the number of times that a reactive expression or observer has been run
 execCount <- function(x) {
-  if (inherits(x, "reactiveExpr"))
+  if (is.reactive(x))
    return(attr(x, "observable", exact = TRUE)$.execCount)
  else if (inherits(x, 'Observer'))
    return(x$.execCount)
@@ -1389,10 +1151,6 @@ setAutoflush <- local({
 #' }
 #' @export
 reactiveTimer <- function(intervalMs=1000, session = getDefaultReactiveDomain()) {
-  # Need to make sure that session is resolved at creation, not when the
-  # callback below is fired (see #1621).
-  force(session)
-
  dependents <- Map$new()
  timerCallbacks$schedule(intervalMs, function() {
    # Quit if the session is closed
@@ -1542,22 +1300,9 @@ coerceToFunc <- function(x) {
 #' @seealso \code{\link{reactiveFileReader}}
 #'
 #' @examples
+#' # Assume the existence of readTimestamp and readValue functions
 #' function(input, output, session) {
-#'
-#'   data <- reactivePoll(1000, session,
-#'     # This function returns the time that log_file was last modified
-#'     checkFunc = function() {
-#'       if (file.exists(log_file))
-#'         file.info(log_file)$mtime[1]
-#'       else
-#'         ""
-#'     },
-#'     # This function returns the content of log_file
-#'     valueFunc = function() {
-#'       read.csv(log_file)
-#'     }
-#'   )
-#'
+#'   data <- reactivePoll(1000, session, readTimestamp, readValue)
 #'   output$dataTable <- renderTable({
 #'     data()
 #'   })
@@ -1632,7 +1377,7 @@ reactivePoll <- function(intervalMillis, session, checkFunc, valueFunc) {
 #' # Cross-session reactive file reader. In this example, all sessions share
 #' # the same reader, so read.csv only gets executed once no matter how many
 #' # user sessions are connected.
-#' fileData <- reactiveFileReader(1000, NULL, 'data.csv', read.csv)
+#' fileData <- reactiveFileReader(1000, session, 'data.csv', read.csv)
 #' function(input, output, session) {
 #'   output$data <- renderTable({
 #'     fileData()
@@ -1786,7 +1531,7 @@ maskReactiveContext <- function(expr) {
 #' invalidations that come from its reactive dependencies; it only invalidates
 #' in response to the given event.
 #'
-#' @section ignoreNULL and ignoreInit:
+#' @section \code{ignoreNULL} and \code{ignoreInit}:
 #'
 #' Both \code{observeEvent} and \code{eventReactive} take an \code{ignoreNULL}
 #' parameter that affects behavior when the \code{eventExpr} evaluates to
--- a/R/render-plot.R
+++ b/R/render-plot.R
@@ -287,30 +287,17 @@ renderPlot <- function(expr, width='auto', height='auto', res=72, ...,
 #   .. ..$ y: NULL
 #   ..$ mapping: Named list()
 #
-# For ggplot2, first you need to define the print.ggplot function from inside
-# renderPlot, then use it to print the plot:
-# print.ggplot <- function(x) {
-#   grid::grid.newpage()
-#
-#   build <- ggplot2::ggplot_build(x)
-#
-#   gtable <- ggplot2::ggplot_gtable(build)
-#   grid::grid.draw(gtable)
-#
-#   structure(list(
-#     build = build,
-#     gtable = gtable
-#   ), class = "ggplot_build_gtable")
-# }
-#
-# p <- print(ggplot(mtcars, aes(wt, mpg)) + geom_point())
-# str(getGgplotCoordmap(p, 1, 72))
+# For ggplot2, it might be something like:
+# p <- ggplot(mtcars, aes(wt, mpg)) + geom_point()
+# str(getGgplotCoordmap(p, 1))
 # List of 1
 #  $ :List of 10
 #   ..$ panel     : int 1
 #   ..$ row       : int 1
 #   ..$ col       : int 1
 #   ..$ panel_vars: Named list()
+#   ..$ scale_x   : int 1
+#   ..$ scale_y   : int 1
 #   ..$ log       :List of 2
 #   .. ..$ x: NULL
 #   .. ..$ y: NULL
@@ -333,8 +320,8 @@ renderPlot <- function(expr, width='auto', height='auto', res=72, ...,
 # can be up to two of them.
 # mtc <- mtcars
 # mtc$am <- factor(mtc$am)
-# p <- print(ggplot(mtc, aes(wt, mpg)) + geom_point() + facet_wrap(~ am))
-# str(getGgplotCoordmap(p, 1, 72))
+# p <- ggplot(mtcars, aes(wt, mpg)) + geom_point() + facet_wrap(~ am)
+# str(getGgplotCoordmap(p, 1))
 # List of 2
 #  $ :List of 10
 #   ..$ panel     : int 1
@@ -342,6 +329,8 @@ renderPlot <- function(expr, width='auto', height='auto', res=72, ...,
 #   ..$ col       : int 1
 #   ..$ panel_vars:List of 1
 #   .. ..$ panelvar1: Factor w/ 2 levels "0","1": 1
+#   ..$ scale_x   : int 1
+#   ..$ scale_y   : int 1
 #   ..$ log       :List of 2
 #   .. ..$ x: NULL
 #   .. ..$ y: NULL
@@ -365,6 +354,8 @@ renderPlot <- function(expr, width='auto', height='auto', res=72, ...,
 #   ..$ col       : int 2
 #   ..$ panel_vars:List of 1
 #   .. ..$ panelvar1: Factor w/ 2 levels "0","1": 2
+#   ..$ scale_x   : int 1
+#   ..$ scale_y   : int 1
 #   ..$ log       :List of 2
 #   .. ..$ x: NULL
 #   .. ..$ y: NULL
@@ -427,191 +418,81 @@ getPrevPlotCoordmap <- function(width, height) {

 # Given a ggplot_build_gtable object, return a coordmap for it.
 getGgplotCoordmap <- function(p, pixelratio, res) {
+  # Structure of ggplot objects changed after 2.1.0
+  new_ggplot <- (utils::packageVersion("ggplot2") > "2.1.0")
+
  if (!inherits(p, "ggplot_build_gtable"))
    return(NULL)

-  tryCatch({
-    # Get info from built ggplot object
-    info <- find_panel_info(p$build)
-
-    # Get ranges from gtable - it's possible for this to return more elements than
-    # info, because it calculates positions even for panels that aren't present.
-    # This can happen with facet_wrap.
-    ranges <- find_panel_ranges(p$gtable, pixelratio, res)
-
-    for (i in seq_along(info)) {
-      info[[i]]$range <- ranges[[i]]
-    }
-
-    return(info)
-
-  }, error = function(e) {
-    # If there was an error extracting info from the ggplot object, just return
-    # a list with the error message.
-    return(structure(list(), error = e$message))
-  })
-}
-
-
-find_panel_info <- function(b) {
-  # Structure of ggplot objects changed after 2.1.0. After 2.2.1, there was a
-  # an API for extracting the necessary information.
-  ggplot_ver <- utils::packageVersion("ggplot2")
-
-  if (ggplot_ver > "2.2.1") {
-    find_panel_info_api(b)
-  } else if (ggplot_ver > "2.1.0") {
-    find_panel_info_non_api(b, ggplot_format = "new")
-  } else {
-    find_panel_info_non_api(b, ggplot_format = "old")
-  }
-}
-
-# This is for ggplot2>2.2.1, after an API was introduced for extracting
-# information about the plot object.
-find_panel_info_api <- function(b) {
-  # Workaround for check NOTE, until ggplot2 >2.2.1 is released
-  colon_colon <- `::`
  # Given a built ggplot object, return x and y domains (data space coords) for
  # each panel.
-  layout <- colon_colon("ggplot2", "summarise_layout")(b)
-  coord  <- colon_colon("ggplot2", "summarise_coord")(b)
-  layers <- colon_colon("ggplot2", "summarise_layers")(b)
+  find_panel_info <- function(b) {
+    if (new_ggplot) {
+      layout <- b$layout$panel_layout
+    } else {
+      layout <- b$panel$layout
+    }
+    # Convert factor to numbers
+    layout$PANEL <- as.integer(as.character(layout$PANEL))

-  # Given x and y scale objects and a coord object, return a list that has
-  # the bases of log transformations for x and y, or NULL if it's not a
-  # log transform.
-  get_log_bases <- function(xscale, yscale, coord) {
-    # Given a transform object, find the log base; if the transform object is
-    # NULL, or if it's not a log transform, return NA.
-    get_log_base <- function(trans) {
-      if (!is.null(trans) && grepl("^log-", trans$name)) {
-        environment(trans$transform)$base
-      } else {
-        NA_real_
+    # Names of facets
+    facet_vars <- NULL
+    if (new_ggplot) {
+      facet <- b$layout$facet
+      if (inherits(facet, "FacetGrid")) {
+        facet_vars <- vapply(c(facet$params$cols, facet$params$rows), as.character, character(1))
+      } else if (inherits(facet, "FacetWrap")) {
+        facet_vars <- vapply(facet$params$facets, as.character, character(1))
+      }
+    } else {
+      facet <- b$plot$facet
+      if (inherits(facet, "grid")) {
+        facet_vars <- vapply(c(facet$cols, facet$rows), as.character, character(1))
+      } else if (inherits(facet, "wrap")) {
+        facet_vars <- vapply(facet$facets, as.character, character(1))
      }
    }

-    # First look for log base in scale, then coord; otherwise NULL.
-    list(
-      x = get_log_base(xscale$trans) %OR% coord$xlog %OR% NULL,
-      y = get_log_base(yscale$trans) %OR% coord$ylog %OR% NULL
-    )
+    # Iterate over each row in the layout data frame
+    lapply(seq_len(nrow(layout)), function(i) {
+      # Slice out one row
+      l <- layout[i, ]
+
+      scale_x <- l$SCALE_X
+      scale_y <- l$SCALE_Y
+
+      mapping <- find_plot_mappings(b)
+
+      # For each of the faceting variables, get the value of that variable in
+      # the current panel. Default to empty _named_ list so that it's sent as a
+      # JSON object, not array.
+      panel_vars <- list(a = NULL)[0]
+      for (i in seq_along(facet_vars)) {
+        var_name <- facet_vars[[i]]
+        vname <- paste0("panelvar", i)
+
+        mapping[[vname]] <- var_name
+        panel_vars[[vname]] <- l[[var_name]]
+      }
+
+      list(
+        panel   = l$PANEL,
+        row     = l$ROW,
+        col     = l$COL,
+        panel_vars = panel_vars,
+        scale_x = scale_x,
+        scale_y = scale_x,
+        log     = check_log_scales(b, scale_x, scale_y),
+        domain  = find_panel_domain(b, l$PANEL, scale_x, scale_y),
+        mapping = mapping
+      )
+    })
  }

-  # Given x/y min/max, and the x/y scale objects, create a list that
-  # represents the domain. Note that the x/y min/max should be taken from
-  # the layout summary table, not the scale objects.
-  get_domain <- function(xmin, xmax, ymin, ymax, xscale, yscale) {
-    is_reverse <- function(scale) {
-      identical(scale$trans$name, "reverse")
-    }
-
-    domain <- list(
-      left   = xmin,
-      right  = xmax,
-      bottom = ymin,
-      top    = ymax
-    )
-
-    if (is_reverse(xscale)) {
-      domain$left  <- -domain$left
-      domain$right <- -domain$right
-    }
-    if (is_reverse(yscale)) {
-      domain$top    <- -domain$top
-      domain$bottom <- -domain$bottom
-    }
-
-    domain
-  }
-
-  # Rename the items in vars to have names like panelvar1, panelvar2.
-  rename_panel_vars <- function(vars) {
-    for (i in seq_along(vars)) {
-      names(vars)[i] <- paste0("panelvar", i)
-    }
-    vars
-  }
-
-  get_mappings <- function(layers, layout, coord) {
-    # For simplicity, we'll just use the mapping from the first layer of the
-    # ggplot object. The original uses quoted expressions; convert to
-    # character.
-    mapping <- layers$mapping[[1]]
-    # lapply'ing as.character results in unexpected behavior for expressions
-    # like `wt/2`; deparse handles it correctly.
-    mapping <- lapply(mapping, deparse)
-
-    # If either x or y is not present, give it a NULL entry.
-    mapping <- mergeVectors(list(x = NULL, y = NULL), mapping)
-
-    # The names (not values) of panel vars are the same across all panels,
-    # so just look at the first one. Also, the order of panel vars needs
-    # to be reversed.
-    vars <- rev(layout$vars[[1]])
-    for (i in seq_along(vars)) {
-      mapping[[paste0("panelvar", i)]] <- names(vars)[i]
-    }
-
-    if (isTRUE(coord$flip)) {
-      mapping[c("x", "y")] <- mapping[c("y", "x")]
-    }
-
-    mapping
-  }
-
-  # Mapping is constant across all panels, so get it here and reuse later.
-  mapping <- get_mappings(layers, layout, coord)
-
-  # If coord_flip is used, these need to be swapped
-  flip_xy <- function(layout) {
-    l <- layout
-    l$xscale <- layout$yscale
-    l$yscale <- layout$xscale
-    l$xmin <- layout$ymin
-    l$xmax <- layout$ymax
-    l$ymin <- layout$xmin
-    l$ymax <- layout$xmax
-    l
-  }
-  if (coord$flip) {
-    layout <- flip_xy(layout)
-  }
-
-  # Iterate over each row in the layout data frame
-  lapply(seq_len(nrow(layout)), function(i) {
-    # Slice out one row, use it as a list. The (former) list-cols are still
-    # in lists, so we need to unwrap them.
-    l <- as.list(layout[i, ])
-    l$vars   <- l$vars[[1]]
-    l$xscale <- l$xscale[[1]]
-    l$yscale <- l$yscale[[1]]
-
-    list(
-      panel   = as.numeric(l$panel),
-      row     = l$row,
-      col     = l$col,
-      # Rename panel vars. They must also be in reversed order.
-      panel_vars = rename_panel_vars(rev(l$vars)),
-      log     = get_log_bases(l$xscale, l$yscale, coord),
-      domain  = get_domain(l$xmin, l$xmax, l$ymin, l$ymax, l$xscale, l$yscale),
-      mapping = mapping
-    )
-  })
-}
-
-
-# This is for ggplot2<=2.2.1, before an API was introduced for extracting
-# information about the plot object. The "old" format was used before 2.1.0.
-# The "new" format was used after 2.1.0, up to 2.2.1. The reason these two
-# formats are mixed together in a single function is historical, and it's not
-# worthwhile to separate them at this point.
-find_panel_info_non_api <- function(b, ggplot_format) {
  # Given a single range object (representing the data domain) from a built
  # ggplot object, return the domain.
  find_panel_domain <- function(b, panel_num, scalex_num = 1, scaley_num = 1) {
-    if (ggplot_format == "new") {
+    if (new_ggplot) {
      range <- b$layout$panel_ranges[[panel_num]]
    } else {
      range <- b$panel$ranges[[panel_num]]
@@ -624,7 +505,7 @@ find_panel_info_non_api <- function(b, ggplot_format) {
    )

    # Check for reversed scales
-    if (ggplot_format == "new") {
+    if (new_ggplot) {
      xscale <- b$layout$panel_scales$x[[scalex_num]]
      yscale <- b$layout$panel_scales$y[[scaley_num]]
    } else {
@@ -665,7 +546,7 @@ find_panel_info_non_api <- function(b, ggplot_format) {
    y_names <- character(0)

    # Continuous scales have a trans; discrete ones don't
-    if (ggplot_format == "new") {
+    if (new_ggplot) {
      if (!is.null(b$layout$panel_scales$x[[scalex_num]]$trans))
        x_names <- b$layout$panel_scales$x[[scalex_num]]$trans$name
      if (!is.null(b$layout$panel_scales$y[[scaley_num]]$trans))
@@ -739,220 +620,129 @@ find_panel_info_non_api <- function(b, ggplot_format) {
    mappings
  }

-  if (ggplot_format == "new") {
-    layout <- b$layout$panel_layout
-  } else {
-    layout <- b$panel$layout
-  }
-  # Convert factor to numbers
-  layout$PANEL <- as.integer(as.character(layout$PANEL))
+  # Given a gtable object, return the x and y ranges (in pixel dimensions)
+  find_panel_ranges <- function(g, pixelratio) {
+    # Given a vector of unit objects, return logical vector indicating which ones
+    # are "null" units. These units use the remaining available width/height --
+    # that is, the space not occupied by elements that have an absolute size.
+    is_null_unit <- function(x) {
+      # A vector of units can be either a list of individual units (a unit.list
+      # object), each with their own set of attributes, or an atomic vector with
+      # one set of attributes. ggplot2 switched from the former (in version
+      # 1.0.1) to the latter. We need to make sure that we get the correct
+      # result in both cases.
+      if (inherits(x, "unit.list")) {
+        # For ggplot2 <= 1.0.1
+        vapply(x, FUN.VALUE = logical(1), function(u) {
+          isTRUE(attr(u, "unit", exact = TRUE) == "null")
+        })
+      } else {
+        # For later versions of ggplot2
+        attr(x, "unit", exact = TRUE) == "null"
+      }
+    }

-  # Names of facets
-  facet_vars <- NULL
-  if (ggplot_format == "new") {
-    facet <- b$layout$facet
-    if (inherits(facet, "FacetGrid")) {
-      facet_vars <- vapply(c(facet$params$cols, facet$params$rows), as.character, character(1))
-    } else if (inherits(facet, "FacetWrap")) {
-      facet_vars <- vapply(facet$params$facets, as.character, character(1))
+    # Workaround for a bug in the quartz device. If you have a 400x400 image and
+    # run `convertWidth(unit(1, "npc"), "native")`, the result will depend on
+    # res setting of the device. If res=72, then it returns 400 (as expected),
+    # but if, e.g., res=96, it will return 300, which is incorrect.
+    devScaleFactor <- 1
+    if (grepl("quartz", names(grDevices::dev.cur()), fixed = TRUE)) {
+      devScaleFactor <- res / 72
    }
-  } else {
-    facet <- b$plot$facet
-    if (inherits(facet, "grid")) {
-      facet_vars <- vapply(c(facet$cols, facet$rows), as.character, character(1))
-    } else if (inherits(facet, "wrap")) {
-      facet_vars <- vapply(facet$facets, as.character, character(1))
+
+    # Convert a unit (or vector of units) to a numeric vector of pixel sizes
+    h_px <- function(x) {
+      devScaleFactor * grid::convertHeight(x, "native", valueOnly = TRUE)
    }
+    w_px <- function(x) {
+      devScaleFactor * grid::convertWidth(x, "native", valueOnly = TRUE)
+    }
+
+    # Given a vector of relative sizes (in grid units), and a function for
+    # converting grid units to numeric pixels, return a numeric vector of
+    # pixel sizes.
+    find_px_sizes <- function(rel_sizes, unit_to_px) {
+      # Total pixels (in height or width)
+      total_px <- unit_to_px(grid::unit(1, "npc"))
+      # Calculate size of all panel(s) together. Panels (and only panels) have
+      # null size.
+      null_idx <- is_null_unit(rel_sizes)
+      # All the absolute heights. At this point, null heights are 0. We need to
+      # calculate them separately and add them in later.
+      px_sizes <- unit_to_px(rel_sizes)
+      # Total size for panels is image size minus absolute (non-panel) elements
+      panel_px_total <- total_px - sum(px_sizes)
+      # Divide up the total panel size up into the panels (scaled by size)
+      panel_sizes_rel <- as.numeric(rel_sizes[null_idx])
+      panel_sizes_rel <- panel_sizes_rel / sum(panel_sizes_rel)
+      px_sizes[null_idx] <- panel_px_total * panel_sizes_rel
+      abs(px_sizes)
+    }
+
+    px_heights <- find_px_sizes(g$heights, h_px)
+    px_widths <- find_px_sizes(g$widths, w_px)
+
+    # Convert to absolute pixel positions
+    x_pos <- cumsum(px_widths)
+    y_pos <- cumsum(px_heights)
+
+    # Match up the pixel dimensions to panels
+    layout <- g$layout
+    # For panels:
+    # * For facet_wrap, they'll be named "panel-1", "panel-2", etc.
+    # * For no facet or facet_grid, they'll just be named "panel". For
+    #   facet_grid, we need to re-order the layout table. Assume that panel
+    #   numbers go from left to right, then next row.
+    # Assign a number to each panel, corresponding to PANEl in the built ggplot
+    # object.
+    layout <- layout[grepl("^panel", layout$name), ]
+    layout <- layout[order(layout$t, layout$l), ]
+    layout$panel <- seq_len(nrow(layout))
+
+    # When using a HiDPI client on a Linux server, the pixel
+    # dimensions are doubled, so we have to divide the dimensions by
+    # `pixelratio`. When a HiDPI client is used on a Mac server (with
+    # the quartz device), the pixel dimensions _aren't_ doubled, even though
+    # the image has double size. In the latter case we don't have to scale the
+    # numbers down.
+    pix_ratio <- 1
+    if (!grepl("^quartz", names(grDevices::dev.cur()))) {
+      pix_ratio <- pixelratio
+    }
+
+    # Return list of lists, where each inner list has left, right, top, bottom
+    # values for a panel
+    lapply(seq_len(nrow(layout)), function(i) {
+      p <- layout[i, , drop = FALSE]
+      list(
+        left   = x_pos[p$l - 1] / pix_ratio,
+        right  = x_pos[p$r] / pix_ratio,
+        bottom = y_pos[p$b] / pix_ratio,
+        top    = y_pos[p$t - 1] / pix_ratio
+      )
+    })
  }

-  # Iterate over each row in the layout data frame
-  lapply(seq_len(nrow(layout)), function(i) {
-    # Slice out one row
-    l <- layout[i, ]

-    scale_x <- l$SCALE_X
-    scale_y <- l$SCALE_Y
+  tryCatch({
+    # Get info from built ggplot object
+    info <- find_panel_info(p$build)

-    mapping <- find_plot_mappings(b)
+    # Get ranges from gtable - it's possible for this to return more elements than
+    # info, because it calculates positions even for panels that aren't present.
+    # This can happen with facet_wrap.
+    ranges <- find_panel_ranges(p$gtable, pixelratio)

-    # For each of the faceting variables, get the value of that variable in
-    # the current panel. Default to empty _named_ list so that it's sent as a
-    # JSON object, not array.
-    panel_vars <- list(a = NULL)[0]
-    for (i in seq_along(facet_vars)) {
-      var_name <- facet_vars[[i]]
-      vname <- paste0("panelvar", i)
-
-      mapping[[vname]] <- var_name
-      panel_vars[[vname]] <- l[[var_name]]
+    for (i in seq_along(info)) {
+      info[[i]]$range <- ranges[[i]]
    }

-    list(
-      panel   = l$PANEL,
-      row     = l$ROW,
-      col     = l$COL,
-      panel_vars = panel_vars,
-      scale_x = scale_x,
-      scale_y = scale_x,
-      log     = check_log_scales(b, scale_x, scale_y),
-      domain  = find_panel_domain(b, l$PANEL, scale_x, scale_y),
-      mapping = mapping
-    )
-  })
-}
-
-
-# Given a gtable object, return the x and y ranges (in pixel dimensions)
-find_panel_ranges <- function(g, pixelratio, res) {
-  # Given a vector of unit objects, return logical vector indicating which ones
-  # are "null" units. These units use the remaining available width/height --
-  # that is, the space not occupied by elements that have an absolute size.
-  is_null_unit <- function(x) {
-    # A vector of units can be either a list of individual units (a unit.list
-    # object), each with their own set of attributes, or an atomic vector with
-    # one set of attributes. ggplot2 switched from the former (in version
-    # 1.0.1) to the latter. We need to make sure that we get the correct
-    # result in both cases.
-    if (inherits(x, "unit.list")) {
-      # For ggplot2 <= 1.0.1
-      vapply(x, FUN.VALUE = logical(1), function(u) {
-        isTRUE(attr(u, "unit", exact = TRUE) == "null")
-      })
-    } else {
-      # For later versions of ggplot2
-      attr(x, "unit", exact = TRUE) == "null"
-    }
-  }
-
-  # Workaround for a bug in the quartz device. If you have a 400x400 image and
-  # run `convertWidth(unit(1, "npc"), "native")`, the result will depend on
-  # res setting of the device. If res=72, then it returns 400 (as expected),
-  # but if, e.g., res=96, it will return 300, which is incorrect.
-  devScaleFactor <- 1
-  if (grepl("quartz", names(grDevices::dev.cur()), fixed = TRUE)) {
-    devScaleFactor <- res / 72
-  }
-
-  # Convert a unit (or vector of units) to a numeric vector of pixel sizes
-  h_px <- function(x) {
-    devScaleFactor * grid::convertHeight(x, "native", valueOnly = TRUE)
-  }
-  w_px <- function(x) {
-    devScaleFactor * grid::convertWidth(x, "native", valueOnly = TRUE)
-  }
-
-  # Given a vector of relative sizes (in grid units), and a function for
-  # converting grid units to numeric pixels, return a list with: known pixel
-  # dimensions, scalable dimensions, and the overall space for the scalable
-  # objects.
-  find_size_info <- function(rel_sizes, unit_to_px) {
-    # Total pixels (in height or width)
-    total_px <- unit_to_px(grid::unit(1, "npc"))
-    # Calculate size of all panel(s) together. Panels (and only panels) have
-    # null size.
-    null_idx <- is_null_unit(rel_sizes)
-
-    # All the absolute heights. At this point, null heights are 0. We need to
-    # calculate them separately and add them in later.
-    px_sizes <- unit_to_px(rel_sizes)
-    # Mark the null heights as NA.
-    px_sizes[null_idx] <- NA_real_
-
-    # The plotting panels all are 'null' units.
-    null_sizes <- rep(NA_real_, length(rel_sizes))
-    null_sizes[null_idx] <- as.numeric(rel_sizes[null_idx])
-
-    # Total size allocated for panels is the total image size minus absolute
-    # (non-panel) elements.
-    panel_px_total <- total_px - sum(px_sizes, na.rm = TRUE)
-
-    # Size of a 1null unit
-    null_px <- abs(panel_px_total / sum(null_sizes, na.rm = TRUE))
-
-    # This returned list contains:
-    # * px_sizes: A vector of known pixel dimensions. The values that were
-    #   null units will be assigned NA. The null units are ones that scale
-    #   when the plotting area is resized.
-    # * null_sizes: A vector of the null units. All others will be assigned
-    #   NA. The null units often are 1, but they may be any value, especially
-    #   when using coord_fixed.
-    # * null_px: The size (in pixels) of a 1null unit.
-    # * null_px_scaled: The size (in pixels) of a 1null unit when scaled to
-    #   fit a smaller dimension (used for plots with coord_fixed).
-    list(
-      px_sizes       = abs(px_sizes),
-      null_sizes     = null_sizes,
-      null_px        = null_px,
-      null_px_scaled = null_px
-    )
-  }
-
-  # Given a size_info, return absolute pixel positions
-  size_info_to_px <- function(info) {
-    px_sizes <- info$px_sizes
-
-    null_idx <- !is.na(info$null_sizes)
-    px_sizes[null_idx] <- info$null_sizes[null_idx] * info$null_px_scaled
-
-    # If this direction is scaled down because of coord_fixed, we need to add an
-    # offset so that the pixel locations are centered.
-    offset <- (info$null_px - info$null_px_scaled) *
-              sum(info$null_sizes, na.rm = TRUE) / 2
-
-    # Get absolute pixel positions
-    cumsum(px_sizes) + offset
-  }
-
-  heights_info <- find_size_info(g$heights, h_px)
-  widths_info  <- find_size_info(g$widths,  w_px)
-
-  if (g$respect) {
-    # This is a plot with coord_fixed. The grid 'respect' option means to use
-    # the same pixel value for 1null, for width and height. We want the
-    # smaller of the two values -- that's what makes the plot fit in the
-    # viewport.
-    null_px_min <- min(heights_info$null_px, widths_info$null_px)
-    heights_info$null_px_scaled <- null_px_min
-    widths_info$null_px_scaled  <- null_px_min
-  }
-
-  # Convert to absolute pixel positions
-  y_pos <- size_info_to_px(heights_info)
-  x_pos <- size_info_to_px(widths_info)
-
-  # Match up the pixel dimensions to panels
-  layout <- g$layout
-  # For panels:
-  # * For facet_wrap, they'll be named "panel-1", "panel-2", etc.
-  # * For no facet or facet_grid, they'll just be named "panel". For
-  #   facet_grid, we need to re-order the layout table. Assume that panel
-  #   numbers go from left to right, then next row.
-  # Assign a number to each panel, corresponding to PANEl in the built ggplot
-  # object.
-  layout <- layout[grepl("^panel", layout$name), ]
-  layout <- layout[order(layout$t, layout$l), ]
-  layout$panel <- seq_len(nrow(layout))
-
-  # When using a HiDPI client on a Linux server, the pixel
-  # dimensions are doubled, so we have to divide the dimensions by
-  # `pixelratio`. When a HiDPI client is used on a Mac server (with
-  # the quartz device), the pixel dimensions _aren't_ doubled, even though
-  # the image has double size. In the latter case we don't have to scale the
-  # numbers down.
-  pix_ratio <- 1
-  if (!grepl("^quartz", names(grDevices::dev.cur()))) {
-    pix_ratio <- pixelratio
-  }
-
-  # Return list of lists, where each inner list has left, right, top, bottom
-  # values for a panel
-  lapply(seq_len(nrow(layout)), function(i) {
-    p <- layout[i, , drop = FALSE]
-    list(
-      left   = x_pos[p$l - 1] / pix_ratio,
-      right  = x_pos[p$r] / pix_ratio,
-      bottom = y_pos[p$b] / pix_ratio,
-      top    = y_pos[p$t - 1] / pix_ratio
-    )
+    return(info)
+
+  }, error = function(e) {
+    # If there was an error extracting info from the ggplot object, just return
+    # a list with the error message.
+    return(structure(list(), error = e$message))
  })
 }
--- a/R/render-table.R
+++ b/R/render-table.R
@@ -176,12 +176,7 @@ renderTable <- function(expr, striped = FALSE, hover = FALSE,
          else ""
        }, " ",
        "class = '", htmlEscape(classNames, TRUE), "' ",
-        "style = 'width:", validateCssUnit(width), ";'"),
-      comment = {
-        if ("comment" %in% names(dots)) dots$comment
-        else FALSE
-      }
-    )
+        "style = 'width:", validateCssUnit(width), ";'"))

    print_args <- c(print_args, non_xtable_args)
    print_args <- print_args[unique(names(print_args))]
--- a/R/serializers.R
+++ b/R/serializers.R
@@ -1,22 +1,3 @@
-#' Add a function for serializing an input before bookmarking application state
-#'
-#' @param inputId Name of the input value.
-#' @param fun A function that takes the input value and returns a modified
-#'   value. The returned value will be used for the test snapshot.
-#' @param session A Shiny session object.
-#'
-#' @keywords internal
-#' @export
-setSerializer <- function(inputId, fun, session = getDefaultReactiveDomain()) {
-  if (is.null(session)) {
-    stop("setSerializer() needs a session object.")
-  }
-
-  input_impl <- .subset2(session$input, "impl")
-  input_impl$setMeta(inputId, "shiny.serializer", fun)
-}
-
-
 # For most types of values, simply return the value unchanged.
 serializerDefault <- function(value, stateDir) {
  value
@@ -77,12 +58,12 @@ serializeReactiveValues <- function(values, exclude, stateDir = NULL) {

    # Get the serializer function for this input value. If none specified, use
    # the default.
-    serializer_fun <- impl$getMeta(name, "shiny.serializer")
-    if (is.null(serializer_fun))
-      serializer_fun <- serializerDefault
+    serializer <- impl$getMeta(name, "shiny.serializer")
+    if (is.null(serializer))
+      serializer <- serializerDefault

    # Apply serializer function.
-    serializer_fun(val, stateDir)
+    serializer(val, stateDir)
  })

  # Filter out any values that were marked as unserializable.
--- a/R/server-input-handlers.R
+++ b/R/server-input-handlers.R
@@ -148,7 +148,7 @@ registerInputHandler("shiny.number", function(val, ...){

 registerInputHandler("shiny.password", function(val, shinysession, name) {
  # Mark passwords as not serializable
-  setSerializer(name, serializerUnserializable)
+  .subset2(shinysession$input, "impl")$setMeta(name, "shiny.serializer", serializerUnserializable)
  val
 })

@@ -214,9 +214,7 @@ registerInputHandler("shiny.file", function(val, shinysession, name) {
  # Need to mark this input value with the correct serializer. When a file is
  # uploaded the usual way (instead of being restored), this occurs in
  # session$`@uploadEnd`.
-  setSerializer(name, serializerFileInput)
-
-  snapshotPreprocessInput(name, snapshotPreprocessorFileInput)
+  .subset2(shinysession$input, "impl")$setMeta(name, "shiny.serializer", serializerFileInput)

  val
 })
--- a/R/server.R
+++ b/R/server.R
@@ -155,7 +155,7 @@ decodeMessage <- function(data) {
    # Treat message as UTF-8
    charData <- rawToChar(data)
    Encoding(charData) <- 'UTF-8'
-    return(safeFromJSON(charData, simplifyVector=FALSE))
+    return(jsonlite::fromJSON(charData, simplifyVector=FALSE))
  }

  i <- 5
@@ -189,6 +189,7 @@ createAppHandlers <- function(httpHandlers, serverFuncSource) {
  appHandlers <- list(
    http = joinHandlers(c(
      sessionHandler,
+      apiHandler(serverFuncSource),
      httpHandlers,
      sys.www.root,
      resourcePathHandler,
@@ -200,6 +201,11 @@ createAppHandlers <- function(httpHandlers, serverFuncSource) {
        return(TRUE)
      }

+      if (grepl("^/api/", ws$request$PATH_INFO)) {
+        apiWsHandler(serverFuncSource)(ws)
+        return(TRUE)
+      }
+
      if (!is.null(getOption("shiny.observer.error", NULL))) {
        warning(
          call. = FALSE,
@@ -226,7 +232,7 @@ createAppHandlers <- function(httpHandlers, serverFuncSource) {
              message("RECV ", rawToChar(msg))
          }

-          if (isEmptyMessage(msg))
+          if (identical(charToRaw("\003\xe9"), msg))
            return()

          msg <- decodeMessage(msg)
@@ -370,9 +376,9 @@ argsForServerFunc <- function(serverFunc, session) {
 }

 getEffectiveBody <- function(func) {
-  if (is.null(func))
-    NULL
-  else if (isS4(func) && class(func) == "functionWithTrace")
+  # Note: NULL values are OK. isS4(NULL) returns FALSE, body(NULL)
+  # returns NULL.
+  if (isS4(func) && class(func) == "functionWithTrace")
    body(func@original)
  else
    body(func)
@@ -465,17 +471,6 @@ serviceApp <- function() {
 # Global flag that's TRUE whenever we're inside of the scope of a call to runApp
 .globals$running <- FALSE

-#' Check whether a Shiny application is running
-#'
-#' This function tests whether a Shiny application is currently running.
-#'
-#' @return \code{TRUE} if a Shiny application is currently running. Otherwise,
-#'   \code{FALSE}.
-#' @export
-isRunning <- function() {
-  .globals$running
-}
-
 #' Run Shiny Application
 #'
 #' Runs a Shiny application. This function normally does not return; interrupt R
@@ -572,7 +567,7 @@ runApp <- function(appDir=getwd(),
  }, add = TRUE)

  if (.globals$running) {
-    stop("Can't call `runApp()` from within `runApp()`. If your ",
+    stop("Can't call `runApp()` from within `runApp()`. If your ,",
         "application code contains `runApp()`, please remove it.")
  }
  .globals$running <- TRUE
@@ -588,11 +583,7 @@ runApp <- function(appDir=getwd(),

  # Make warnings print immediately
  # Set pool.scheduler to support pool package
-  ops <- options(
-    # Raise warn level to 1, but don't lower it
-    warn = max(1, getOption("warn", default = 1)),
-    pool.scheduler = scheduleTask
-  )
+  ops <- options(warn = 1, pool.scheduler = scheduleTask)
  on.exit(options(ops), add = TRUE)

  appParts <- as.shiny.appobj(appDir)
@@ -747,22 +738,15 @@ runApp <- function(appDir=getwd(),
    }
  }

-  # Invoke user-defined onStop callbacks, before the application's internal
-  # onStop callbacks.
-  on.exit({
-    .globals$onStopCallbacks$invoke()
-    .globals$onStopCallbacks <- Callbacks$new()
-  }, add = TRUE)
-
  # Extract appOptions (which is a list) and store them as shinyOptions, for
  # this app. (This is the only place we have to store settings that are
  # accessible both the UI and server portion of the app.)
  unconsumeAppOptions(appParts$appOptions)

-  # Set up the onStop before we call onStart, so that it gets called even if an
+  # Set up the onEnd before we call onStart, so that it gets called even if an
  # error happens in onStart.
-  if (!is.null(appParts$onStop))
-    on.exit(appParts$onStop(), add = TRUE)
+  if (!is.null(appParts$onEnd))
+    on.exit(appParts$onEnd(), add = TRUE)
  if (!is.null(appParts$onStart))
    appParts$onStart()

@@ -1044,9 +1028,3 @@ browserViewer <- function(browser = getOption("browser")) {
 inShinyServer <- function() {
  nzchar(Sys.getenv('SHINY_PORT'))
 }
-
-# This check was moved out of the main function body because of an issue with
-# the RStudio debugger. (#1474)
-isEmptyMessage <- function(msg) {
-  identical(charToRaw("\003\xe9"), msg)
-}
--- a/R/shiny.R
+++ b/R/shiny.R
@@ -5,7 +5,7 @@ NULL
 #'
 #' Shiny makes it incredibly easy to build interactive web applications with R.
 #' Automatic "reactive" binding between inputs and outputs and extensive
-#' prebuilt widgets make it possible to build beautiful, responsive, and
+#' pre-built widgets make it possible to build beautiful, responsive, and
 #' powerful applications with minimal effort.
 #'
 #' The Shiny tutorial at \url{http://shiny.rstudio.com/tutorial/} explains
@@ -142,15 +142,6 @@ toJSON <- function(x, ...,  dataframe = "columns", null = "null", na = "null",
   keep_vec_names = keep_vec_names, json_verbatim = TRUE, ...)
 }

-# If the input to jsonlite::fromJSON is not valid JSON, it will try to fetch a
-# URL or read a file from disk. We don't want to allow that.
-safeFromJSON <- function(txt, ...) {
-  if (!jsonlite::validate(txt)) {
-    stop("Argument 'txt' is not a valid JSON string.")
-  }
-  jsonlite::fromJSON(txt, ...)
-}
-
 # Call the workerId func with no args to get the worker id, and with an arg to
 # set it.
 #
@@ -210,13 +201,12 @@ workerId <- local({
 #'     }
 #'     \item{\code{singletons} - for internal use}
 #'     \item{\code{url_protocol}, \code{url_hostname}, \code{url_port},
-#'       \code{url_pathname}, \code{url_search}, \code{url_hash_initial}
-#'       and \code{url_hash} can be used to get the components of the URL
-#'       that was requested by the browser to load the Shiny app page.
-#'       These values are from the browser's perspective, so neither HTTP
-#'       proxies nor Shiny Server will affect these values. The
-#'       \code{url_search} value may be used with \code{\link{parseQueryString}}
-#'       to access query string parameters.
+#'       \code{url_pathname}, \code{url_search}, and \code{url_hash_initial}
+#'       can be used to get the components of the URL that was requested by the
+#'       browser to load the Shiny app page. These values are from the
+#'       browser's perspective, so neither HTTP proxies nor Shiny Server will
+#'       affect these values. The \code{url_search} value may be used with
+#'       \code{\link{parseQueryString}} to access query string parameters.
 #'     }
 #'   }
 #'   \code{clientData} also contains information about each output.
@@ -384,24 +374,12 @@ NULL
 #' @seealso \url{http://shiny.rstudio.com/articles/modules.html}
 #' @export
 NS <- function(namespace, id = NULL) {
-  if (length(namespace) == 0)
-    ns_prefix <- character(0)
-  else
-    ns_prefix <- paste(namespace, collapse = ns.sep)
-
-  f <- function(id) {
-    if (length(id) == 0)
-      return(ns_prefix)
-    if (length(ns_prefix) == 0)
-      return(id)
-
-    paste(ns_prefix, id, sep = ns.sep)
-  }
-
  if (missing(id)) {
-    f
+    function(id) {
+      paste(c(namespace, id), collapse = ns.sep)
+    }
  } else {
-    f(id)
+    paste(c(namespace, id), collapse = ns.sep)
  }
 }

@@ -427,6 +405,7 @@ ShinySession <- R6Class(
    fileUploadContext = 'FileUploadContext',
    .input      = 'ANY', # Internal ReactiveValues object for normal input sent from client
    .clientData = 'ANY', # Internal ReactiveValues object for other data sent from the client
+    apiObservers = list(),
    busyCount = 0L, # Number of observer callbacks that are pending. When 0, we are idle
    closedCallbacks = 'Callbacks',
    flushCallbacks = 'Callbacks',
@@ -437,7 +416,6 @@ ShinySession <- R6Class(
    restoreCallbacks = 'Callbacks',
    restoredCallbacks = 'Callbacks',
    bookmarkExclude = character(0),  # Names of inputs to exclude from bookmarking
-    getBookmarkExcludeFuns = list(),

    testMode = FALSE,                # Are we running in test mode?
    testExportExprs = list(),
@@ -602,16 +580,6 @@ ShinySession <- R6Class(
      }) # withReactiveDomain
    },

-    # Modules (scopes) call this to register a function that returns a vector
-    # of names to exclude from bookmarking. The function should return
-    # something like c("scope1-x", "scope1-y"). This doesn't use a Callback
-    # object because the return values of the functions are needed, but
-    # Callback$invoke() discards return values.
-    registerBookmarkExclude = function(fun) {
-      len <- length(private$getBookmarkExcludeFuns) + 1
-      private$getBookmarkExcludeFuns[[len]] <- fun
-    },
-
    # Save output values and errors. This is only used for testing mode.
    storeOutputValues = function(values = NULL) {
      private$outputValues <- mergeVectors(private$outputValues, values)
@@ -648,15 +616,6 @@ ShinySession <- R6Class(
              values$input <- allInputs[items]
            }

-            # Apply preprocessor functions for inputs that have them.
-            values$input <- lapply(
-              setNames(names(values$input), names(values$input)),
-              function(name) {
-                preprocess <- private$getSnapshotPreprocessInput(name)
-                preprocess(values$input[[name]])
-              }
-            )
-
            values$input <- sortByName(values$input)
          }

@@ -670,21 +629,6 @@ ShinySession <- R6Class(
              values$output <- private$outputValues[items]
            }

-            # Filter out those outputs that have the snapshotExclude attribute.
-            exclude_idx <- vapply(names(values$output), function(name) {
-              isTRUE(attr(private$.outputs[[name]], "snapshotExclude", TRUE))
-            }, logical(1))
-            values$output <- values$output[!exclude_idx]
-
-            # Apply snapshotPreprocess functions for outputs that have them.
-            values$output <- lapply(
-              setNames(names(values$output), names(values$output)),
-              function(name) {
-                preprocess <- private$getSnapshotPreprocessOutput(name)
-                preprocess(values$output[[name]])
-              }
-            )
-
            values$output <- sortByName(values$output)
          }

@@ -739,20 +683,6 @@ ShinySession <- R6Class(
          }
        }
      )
-    },
-
-    # Get the snapshotPreprocessOutput function for an output name. If no preprocess
-    # function has been set, return the identity function.
-    getSnapshotPreprocessOutput = function(name) {
-      fun <- attr(private$.outputs[[name]], "snapshotPreprocess", exact = TRUE)
-      fun %OR% identity
-    },
-
-    # Get the snapshotPreprocessInput function for an input name. If no preprocess
-    # function has been set, return the identity function.
-    getSnapshotPreprocessInput = function(name) {
-      fun <- private$.input$getMeta(name, "shiny.snapshot.preprocess")
-      fun %OR% identity
    }
  ),
  public = list(
@@ -760,6 +690,7 @@ ShinySession <- R6Class(
    progressStack = 'Stack', # Stack of progress objects
    input       = 'reactivevalues', # Externally-usable S3 wrapper object for .input
    output      = 'ANY',    # Externally-usable S3 wrapper object for .outputs
+    api         = 'ANY',    # Externally-usable S3 wrapper object for APIs
    clientData  = 'reactivevalues', # Externally-usable S3 wrapper object for .clientData
    token = 'character',  # Used to identify this instance in URLs
    files = 'Map',        # For keeping track of files sent to client
@@ -796,6 +727,7 @@ ShinySession <- R6Class(
      .setLabel(self$clientData, 'clientData')

      self$output <- .createOutputWriter(self)
+      self$api <- .createApiWriter(self)

      self$token <- createUniqueId(16)
      private$.outputs <- list()
@@ -814,7 +746,7 @@ ShinySession <- R6Class(

      if (!is.null(websocket$request$HTTP_SHINY_SERVER_CREDENTIALS)) {
        try({
-          creds <- safeFromJSON(websocket$request$HTTP_SHINY_SERVER_CREDENTIALS)
+          creds <- jsonlite::fromJSON(websocket$request$HTTP_SHINY_SERVER_CREDENTIALS)
          self$user <- creds$user
          self$groups <- creds$groups
        }, silent=FALSE)
@@ -828,8 +760,7 @@ ShinySession <- R6Class(
      private$sendMessage(
        config = list(
          workerId = workerId(),
-          sessionId = self$token,
-          user = self$user
+          sessionId = self$token
        )
      )
    },
@@ -897,7 +828,7 @@ ShinySession <- R6Class(
          if (anyUnnamed(dots))
            stop("exportTestValues: all arguments must be named.")

-          names(dots) <- ns(names(dots))
+          names(dots) <- vapply(names(dots), ns, character(1))

          do.call(
            .subset2(self, "exportTestValues"),
@@ -1011,12 +942,6 @@ ShinySession <- R6Class(
        restoredCallbacks$invoke(scopeState)
      })

-      # Returns the excluded names with the scope's ns prefix on them.
-      private$registerBookmarkExclude(function() {
-        excluded <- scope$getBookmarkExclude()
-        ns(excluded)
-      })
-
      scope
    },
    ns = function(id) {
@@ -1100,10 +1025,6 @@ ShinySession <- R6Class(
      }

      if (is.function(func)) {
-        # Extract any output attributes attached to the render function. These
-        # will be attached to the observer after it's created.
-        outputAttrs <- attr(func, "outputAttrs", TRUE)
-
        funcFormals <- formals(func)
        # ..stacktraceon matches with the top-level ..stacktraceoff.., because
        # the observer we set up below has ..stacktraceon=FALSE
@@ -1181,12 +1102,6 @@ ShinySession <- R6Class(
            private$invalidatedOutputValues$set(name, value)
        }, suspended=private$shouldSuspend(name), label=label)

-        # If any output attributes were added to the render function attach
-        # them to observer.
-        lapply(names(outputAttrs), function(name) {
-          attr(obs, name) <- outputAttrs[[name]]
-        })
-
        obs$onInvalidate(function() {
          self$showProgress(name)
        })
@@ -1233,13 +1148,6 @@ ShinySession <- R6Class(
      })

      if (!hasPendingUpdates()) {
-        # Normally, if there are no updates, simply return without sending
-        # anything to the client. But if we are in test mode, we still want to
-        # send a message with blank `values`, so that the client knows that
-        # any changed inputs have been received by the server and processed.
-        if (isTRUE(private$testMode)) {
-          private$sendMessage( values = list() )
-        }
        return(invisible())
      }

@@ -1355,12 +1263,8 @@ ShinySession <- R6Class(
      private$bookmarkExclude <- names
    },
    getBookmarkExclude = function() {
-      scopedExcludes <- lapply(private$getBookmarkExcludeFuns, function(f) f())
-      scopedExcludes <- unlist(scopedExcludes)
-
-      c(private$bookmarkExclude, scopedExcludes)
+      private$bookmarkExclude
    },
-
    onBookmark = function(fun) {
      if (!is.function(fun) || length(fun) != 1) {
        stop("`fun` must be a function that takes one argument")
@@ -1501,40 +1405,8 @@ ShinySession <- R6Class(
        )
      )
    },
-    sendInsertTab = function(inputId, liTag, divTag, menuName,
-                             target, position, select) {
-      private$sendMessage(
-        `shiny-insert-tab` = list(
-          inputId = inputId,
-          liTag = liTag,
-          divTag = divTag,
-          menuName = menuName,
-          target = target,
-          position = position,
-          select = select
-        )
-      )
-    },
-    sendRemoveTab = function(inputId, target) {
-      private$sendMessage(
-        `shiny-remove-tab` = list(
-          inputId = inputId,
-          target = target
-        )
-      )
-    },
-    sendChangeTabVisibility = function(inputId, target, type) {
-      private$sendMessage(
-        `shiny-change-tab-visibility` = list(
-          inputId = inputId,
-          target = target,
-          type = type
-        )
-      )
-    },
-    updateQueryString = function(queryString, mode) {
-      private$sendMessage(updateQueryString = list(
-        queryString = queryString, mode = mode))
+    updateQueryString = function(queryString) {
+      private$sendMessage(updateQueryString = list(queryString = queryString))
    },
    resetBrush = function(brushId) {
      private$sendMessage(
@@ -1570,8 +1442,7 @@ ShinySession <- R6Class(
      fileData <- private$fileUploadContext$getUploadOperation(jobId)$finish()
      private$.input$set(inputId, fileData)

-      setSerializer(inputId, serializerFileInput)
-      snapshotPreprocessInput(inputId, snapshotPreprocessorFileInput)
+      private$.input$setMeta(inputId, "shiny.serializer", serializerFileInput)

      invisible()
    },
@@ -1614,30 +1485,9 @@ ShinySession <- R6Class(
        }
      }

-      # @description Only applicable to files uploaded via IE. When possible,
-      #   adds the appropriate extension to temporary files created by
-      #   \code{mime::parse_multipart}.
-      # @param multipart A named list as returned by
-      #   \code{mime::parse_multipart}
-      # @return A named list with datapath updated to point to the new location
-      #   of the file, if an extension was added.
-      maybeMoveIEUpload <- function(multipart) {
-        if (is.null(multipart)) return(NULL)
-
-        lapply(multipart, function(input) {
-          oldPath <- input$datapath
-          newPath <- paste0(oldPath, maybeGetExtension(input$name))
-          if (oldPath != newPath) {
-            file.rename(oldPath, newPath)
-            input$datapath <- newPath
-          }
-          input
-        })
-      }
-
      if (matches[2] == 'uploadie' && identical(req$REQUEST_METHOD, "POST")) {
        id <- URLdecode(matches[3])
-        res <- maybeMoveIEUpload(mime::parse_multipart(req))
+        res <- mime::parse_multipart(req)
        private$.input$set(id, res[[id]])
        return(httpResponse(200, 'text/plain', 'OK'))
      }
@@ -1785,6 +1635,19 @@ ShinySession <- R6Class(
                     workerId(),
                     URLencode(createUniqueId(8), TRUE)))
    },
+    registerApi = function(name, func) {
+      private$apiObservers[[name]] <- func
+    },
+    enableApi = function(name, callback) {
+      rexpr <- private$apiObservers[[name]]
+      if (is.null(rexpr)) {
+        stop("API not found")
+      }
+
+      observe({
+        callback(..stacktraceon..(rexpr()))
+      }, ..stacktraceon = FALSE)
+    },
    # This function suspends observers for hidden outputs and resumes observers
    # for un-hidden outputs.
    manageHiddenOutputs = function() {
@@ -1993,9 +1856,6 @@ onFlushed <- function(fun, once = TRUE, session = getDefaultReactiveDomain()) {
 }

 #' @rdname onFlush
-#'
-#' @seealso \code{\link{onStop}()} for registering callbacks that will be
-#'   invoked when the application exits, or when a session ends.
 #' @export
 onSessionEnded <- function(fun, session = getDefaultReactiveDomain()) {
  session$onSessionEnded(fun)
@@ -2021,85 +1881,46 @@ flushAllSessions <- function() {
  })
 }

-.globals$onStopCallbacks <- Callbacks$new()
-
-#' Run code after an application or session ends
-#'
-#' This function registers callback functions that are invoked when the
-#' application exits (when \code{\link{runApp}} exits), or after each user
-#' session ends (when a client disconnects).
-#'
-#' @param fun A function that will be called after the app has finished running.
-#' @param session A scope for when the callback will run. If \code{onStop} is
-#'   called from within the server function, this will default to the current
-#'   session, and the callback will be invoked when the current session ends. If
-#'   \code{onStop} is called outside a server function, then the callback will
-#'   be invoked with the application exits.
-#'
-#'
-#' @seealso \code{\link{onSessionEnded}()} for the same functionality, but at
-#'   the session level only.
-#'
-#' @return A function which, if invoked, will cancel the callback.
-#' @examples
-#' ## Only run this example in interactive R sessions
-#' if (interactive()) {
-#'   # Open this application in multiple browsers, then close the browsers.
-#'   shinyApp(
-#'     ui = basicPage("onStop demo"),
-#'
-#'     server = function(input, output, session) {
-#'       onStop(function() cat("Session stopped\n"))
-#'     },
-#'
-#'     onStart = function() {
-#'       cat("Doing application setup\n")
-#'
-#'       onStop(function() {
-#'         cat("Doing application cleanup\n")
-#'       })
-#'     }
-#'   )
-#' }
-#' # In the example above, onStop() is called inside of onStart(). This is
-#' # the pattern that should be used when creating a shinyApp() object from
-#' # a function, or at the console. If instead you are writing an app.R which
-#' # will be invoked with runApp(), you can do it that way, or put the onStop()
-#' # before the shinyApp() call, as shown below.
-#'
-#' \dontrun{
-#' # ==== app.R ====
-#' cat("Doing application setup\n")
-#' onStop(function() {
-#'   cat("Doing application cleanup\n")
-#' })
-#'
-#' shinyApp(
-#'   ui = basicPage("onStop demo"),
-#'
-#'   server = function(input, output, session) {
-#'     onStop(function() cat("Session stopped\n"))
-#'   }
-#' )
-#' # ==== end app.R ====
-#'
-#'
-#' # Similarly, if you have a global.R, you can call onStop() from there.
-#' # ==== global.R ====
-#' cat("Doing application setup\n")
-#' onStop(function() {
-#'   cat("Doing application cleanup\n")
-#' })
-#' # ==== end global.R ====
-#' }
-#' @export
-onStop <- function(fun, session = getDefaultReactiveDomain()) {
-  if (is.null(getDefaultReactiveDomain())) {
-    return(.globals$onStopCallbacks$register(fun))
-  } else {
-    # Note: In the future if we allow scoping the onStop() callback to modules
-    # and allow modules to be stopped, then session_proxy objects will need
-    # its own implementation of $onSessionEnded.
-    return(session$onSessionEnded(fun))
-  }
+.createApiWriter <- function(shinysession, ns = identity) {
+  structure(list(impl=shinysession, ns=ns), class='shinyapi')
+}
+
+#' @export
+`$<-.shinyapi` <- function(x, name, value) {
+  name <- .subset2(x, 'ns')(name)
+
+  label <- deparse(substitute(value))
+  if (length(substitute(value)) > 1) {
+    # value is an object consisting of a call and its arguments. Here we want
+    # to find the source references for the first argument (if there are
+    # arguments), which generally corresponds to the reactive expression--
+    # e.g. in renderTable({ x }), { x } is the expression to trace.
+    attr(label, "srcref") <- srcrefFromShinyCall(substitute(value)[[2]])
+    srcref <- attr(substitute(value)[[2]], "srcref")
+    if (length(srcref) > 0)
+      attr(label, "srcfile") <- srcFileOfRef(srcref[[1]])
+  }
+  .subset2(x, 'impl')$registerApi(name, value)
+  return(invisible(x))
+}
+
+#' @export
+`[[<-.shinyapi` <- `$<-.shinyapi`
+
+#' @export
+`$.shinyapi` <- function(x, name) {
+  stop("Reading objects from shinyapi object not allowed.")
+}
+
+#' @export
+`[[.shinyapi` <- `$.shinyapi`
+
+#' @export
+`[.shinyapi` <- function(values, name) {
+  stop("Single-bracket indexing of shinyapi object is not allowed.")
+}
+
+#' @export
+`[<-.shinyapi` <- function(values, name, value) {
+  stop("Single-bracket indexing of shinyapi object is not allowed.")
 }
--- a/R/shinyui.R
+++ b/R/shinyui.R
@@ -14,7 +14,7 @@ NULL
 #' # now we can just write "static" content without withMathJax()
 #' div("more math here $$\\sqrt{2}$$")
 withMathJax <- function(...) {
-  path <- 'https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML'
+  path <- 'https://cdn.mathjax.org/mathjax/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML'
  tagList(
    tags$head(
      singleton(tags$script(src = path, type = 'text/javascript'))
@@ -45,6 +45,7 @@ renderPage <- function(ui, connection, showcase=0, testMode=FALSE) {
  shiny_deps <- list(
    htmlDependency("json2", "2014.02.04", c(href="shared"), script = "json2-min.js"),
    htmlDependency("jquery", "1.12.4", c(href="shared"), script = "jquery.min.js"),
+    htmlDependency("babel-polyfill", "6.7.2", c(href="shared"), script = "babel-polyfill.min.js"),
    htmlDependency("shiny", utils::packageVersion("shiny"), c(href="shared"),
      script = if (getOption("shiny.minified", TRUE)) "shiny.min.js" else "shiny.js",
      stylesheet = "shiny.css")
--- a/R/shinywrappers.R
+++ b/R/shinywrappers.R
@@ -88,34 +88,6 @@ as.tags.shiny.render.function <- function(x, ..., inline = FALSE) {
  useRenderFunction(x, inline = inline)
 }

-
-#' Mark a render function with attributes that will be used by the output
-#'
-#' @inheritParams markRenderFunction
-#' @param snapshotExclude If TRUE, exclude the output from test snapshots.
-#' @param snapshotPreprocess A function for preprocessing the value before
-#'   taking a test snapshot.
-#'
-#' @keywords internal
-markOutputAttrs <- function(renderFunc, snapshotExclude = NULL,
-  snapshotPreprocess = NULL)
-{
-  # Add the outputAttrs attribute if necessary
-  if (is.null(attr(renderFunc, "outputAttrs", TRUE))) {
-    attr(renderFunc, "outputAttrs") <- list()
-  }
-
-  if (!is.null(snapshotExclude)) {
-    attr(renderFunc, "outputAttrs")$snapshotExclude <- snapshotExclude
-  }
-
-  if (!is.null(snapshotPreprocess)) {
-    attr(renderFunc, "outputAttrs")$snapshotPreprocess <- snapshotPreprocess
-  }
-
-  renderFunc
-}
-
 #' Image file output
 #'
 #' Renders a reactive image that is suitable for assigning to an \code{output}
@@ -382,6 +354,98 @@ renderUI <- function(expr, env=parent.frame(), quoted=FALSE,
  markRenderFunction(uiOutput, renderFunc, outputArgs = outputArgs)
 }

+#' @export
+serveJSON <- function(expr, env=parent.frame(), quoted=FALSE) {
+  installExprFunction(expr, "func", env, quoted)
+  function() {
+    structure(
+      toJSON(func(), pretty = TRUE),
+      content.type = "application/json"
+    )
+  }
+}
+
+#' @export
+servePlot <- function(expr, env=parent.frame(), quoted=FALSE,
+  defaultWidth = 600, defaultHeight = 400) {
+
+  if (!is.function(defaultWidth))
+    defaultWidth <- valueToFunc(defaultWidth)
+  if (!is.function(defaultHeight))
+    defaultHeight <- valueToFunc(defaultHeight)
+
+  installExprFunction(expr, "func", env, quoted)
+  function() {
+    input <- getDefaultReactiveDomain()$input
+    w <- if (!is.null(input$`plot-width`)) as.numeric(input$`plot-width`) else defaultWidth()
+    h <- if (!is.null(input$`plot-height`)) as.numeric(input$`plot-height`) else defaultHeight()
+
+    pngfile <- plotPNG(function() {
+      result <- withVisible(func())
+      if (result$visible) {
+        # Use capture.output to squelch printing to the actual console; we
+        # are only interested in plot output
+        utils::capture.output({
+          # The value needs to be printed just in case it's an object that
+          # requires printing to generate plot output, similar to ggplot2. But
+          # for base graphics, it would already have been rendered when func was
+          # called above, and the print should have no effect.
+          print(result$value)
+        })
+      }
+    }, width = w, height = h)
+
+    structure(
+      list(file = pngfile, owned = TRUE),
+      content.type = "image/png"
+    )
+  }
+}
+
+#' @importFrom utils write.csv
+#' @export
+serveCSV <- function(expr, env=parent.frame(), quoted=FALSE, row.names=FALSE) {
+  installExprFunction(expr, "func", env, quoted)
+  function() {
+    tmp <- tempfile(".csv")
+    write.csv(func(), tmp, row.names=row.names)
+    structure(
+      list(file = tmp, owned = TRUE),
+      content.type = "text/csv"
+    )
+  }
+}
+
+#' @export
+serveText <- function(expr, env=parent.frame(), quoted=FALSE) {
+  installExprFunction(expr, "func", env, quoted)
+  function() {
+    structure(
+      paste(func(), collapse = "\n"),
+      content.type = "text/plain"
+    )
+  }
+}
+
+#' @export
+serveRaw <- function(expr, env=parent.frame(), quoted=FALSE, contentType) {
+
+  if (!is.function(contentType))
+    contentType <- valueToFunc(contentType)
+
+  installExprFunction(expr, "func", env, quoted)
+  function() {
+    bytes <- func()
+    if (!is.raw(bytes)) {
+      stop("serveRaw expects raw vector data")
+    }
+    structure(
+      bytes,
+      content.type = contentType()
+    )
+  }
+}
+
 #' File Downloads
 #'
 #' Allows content from the Shiny application to be made available to the user as
@@ -438,9 +502,7 @@ downloadHandler <- function(filename, content, contentType=NA, outputArgs=list()
  renderFunc <- function(shinysession, name, ...) {
    shinysession$registerDownload(name, filename, contentType, content)
  }
-  snapshotExclude(
-    markRenderFunction(downloadButton, renderFunc, outputArgs = outputArgs)
-  )
+  markRenderFunction(downloadButton, renderFunc, outputArgs = outputArgs)
 }

 #' Table output with the JavaScript library DataTables
@@ -541,18 +603,7 @@ renderDataTable <- function(expr, options = NULL, searchDelay = 500,
    )
  }

-  renderFunc <- markRenderFunction(dataTableOutput, renderFunc, outputArgs = outputArgs)
-
-  renderFunc <- snapshotPreprocessOutput(renderFunc, function(value) {
-    # Remove the action field so that it's not saved in test snapshots. It
-    # contains a value that changes every time an app is run, and shouldn't be
-    # stored for test snapshots. It will be something like:
-    # "session/e0d14d3fe97f672f9655a127f2a1e079/dataobj/table?w=&nonce=7f5d6d54e22450a3"
-    value$action <- NULL
-    value
-  })
-
-  renderFunc
+  markRenderFunction(dataTableOutput, renderFunc, outputArgs = outputArgs)
 }

 # a data frame containing the DataTables 1.9 and 1.10 names
--- a/R/showcase.R
+++ b/R/showcase.R
@@ -18,8 +18,7 @@ licenseLink <- function(licenseName) {
    "Artistic-2.0" = "http://www.r-project.org/Licenses/Artistic-2.0",
    "BSD_2_clause" = "http://www.r-project.org/Licenses/BSD_2_clause",
    "BSD_3_clause" = "http://www.r-project.org/Licenses/BSD_3_clause",
-    "MIT" = "http://www.r-project.org/Licenses/MIT",
-    "CC-BY-SA-4.0" = "https://www.r-project.org/Licenses/CC-BY-SA-4.0")
+    "MIT" = "http://www.r-project.org/Licenses/MIT")
  if (exists(licenseName, where = licenses)) {
    tags$a(href=licenses[[licenseName]], licenseName)
  } else {
--- a/R/snapshot.R
+++ b/R/snapshot.R
@@ -1,44 +0,0 @@
-#' Mark an output to be excluded from test snapshots
-#'
-#' @param x A reactive which will be assigned to an output.
-#'
-#' @export
-snapshotExclude <- function(x) {
-  markOutputAttrs(x, snapshotExclude = TRUE)
-}
-
-#' Add a function for preprocessing an output before taking a test snapshot
-#'
-#' @param x A reactive which will be assigned to an output.
-#' @param fun A function that takes the output value as an input and returns a
-#'   modified value. The returned value will be used for the test snapshot.
-#'
-#' @export
-snapshotPreprocessOutput <- function(x, fun) {
-  markOutputAttrs(x, snapshotPreprocess = fun)
-}
-
-
-#' Add a function for preprocessing an input before taking a test snapshot
-#'
-#' @param inputId Name of the input value.
-#' @param fun A function that takes the input value and returns a modified
-#'   value. The returned value will be used for the test snapshot.
-#' @param session A Shiny session object.
-#'
-#' @export
-snapshotPreprocessInput <- function(inputId, fun, session = getDefaultReactiveDomain()) {
-  if (is.null(session)) {
-    stop("snapshotPreprocessInput() needs a session object.")
-  }
-
-  input_impl <- .subset2(session$input, "impl")
-  input_impl$setMeta(inputId, "shiny.snapshot.preprocess", fun)
-}
-
-
-# Strip out file path from fileInput value
-snapshotPreprocessorFileInput <- function(value) {
-  value$datapath <- basename(value$datapath)
-  value
-}
--- a/R/update-input.R
+++ b/R/update-input.R
@@ -2,7 +2,6 @@
 #'
 #' @template update-input
 #' @param value The value to set for the input object.
-#' @param placeholder The placeholder to set for the input object.
 #'
 #' @seealso \code{\link{textInput}}
 #'
@@ -35,15 +34,15 @@
 #' shinyApp(ui, server)
 #' }
 #' @export
-updateTextInput <- function(session, inputId, label = NULL, value = NULL, placeholder = NULL) {
-  message <- dropNulls(list(label=label, value=value, placeholder=placeholder))
+updateTextInput <- function(session, inputId, label = NULL, value = NULL) {
+  message <- dropNulls(list(label=label, value=value))
  session$sendInputMessage(inputId, message)
 }

 #' Change the value of a textarea input on the client
 #'
 #' @template update-input
-#' @inheritParams updateTextInput
+#' @param value The value to set for the input object.
 #'
 #' @seealso \code{\link{textAreaInput}}
 #'
@@ -107,10 +106,7 @@ updateTextAreaInput <- updateTextInput
 #' shinyApp(ui, server)
 #' }
 #' @export
-updateCheckboxInput <- function(session, inputId, label = NULL, value = NULL) {
-  message <- dropNulls(list(label=label, value=value))
-  session$sendInputMessage(inputId, message)
-}
+updateCheckboxInput <- updateTextInput


 #' Change the label or icon of an action button on the client
@@ -456,18 +452,16 @@ updateSliderInput <- function(session, inputId, label = NULL, value = NULL,


 updateInputOptions <- function(session, inputId, label = NULL, choices = NULL,
-                               selected = NULL, inline = FALSE, type = NULL,
-                               choiceNames = NULL, choiceValues = NULL) {
-  if (is.null(type)) stop("Please specify the type ('checkbox' or 'radio')")
+                               selected = NULL, inline = FALSE,
+                               type = 'checkbox') {
+  if (!is.null(choices))
+    choices <- choicesWithNames(choices)
+  if (!is.null(selected))
+    selected <- validateSelected(selected, choices, session$ns(inputId))

-  args <- normalizeChoicesArgs(choices, choiceNames, choiceValues, mustExist = FALSE)
-
-  if (!is.null(selected)) selected <- as.character(selected)
-
-  options <- if (!is.null(args$choiceValues)) {
+  options <- if (!is.null(choices)) {
    format(tagList(
-      generateOptions(session$ns(inputId), selected, inline, type,
-        args$choiceNames, args$choiceValues)
+      generateOptions(session$ns(inputId), choices, selected, inline, type = type)
    ))
  }

@@ -516,10 +510,9 @@ updateInputOptions <- function(session, inputId, label = NULL, choices = NULL,
 #' }
 #' @export
 updateCheckboxGroupInput <- function(session, inputId, label = NULL,
-  choices = NULL, selected = NULL, inline = FALSE,
-  choiceNames = NULL, choiceValues = NULL) {
-  updateInputOptions(session, inputId, label, choices, selected,
-                     inline, "checkbox", choiceNames, choiceValues)
+                                     choices = NULL, selected = NULL,
+                                     inline = FALSE) {
+  updateInputOptions(session, inputId, label, choices, selected, inline)
 }


@@ -559,15 +552,10 @@ updateCheckboxGroupInput <- function(session, inputId, label = NULL,
 #' }
 #' @export
 updateRadioButtons <- function(session, inputId, label = NULL, choices = NULL,
-                               selected = NULL, inline = FALSE,
-                               choiceNames = NULL, choiceValues = NULL) {
+                               selected = NULL, inline = FALSE) {
  # you must select at least one radio button
-  if (is.null(selected)) {
-    if (!is.null(choices)) selected <- choices[[1]]
-    else if (!is.null(choiceValues)) selected <- choiceValues[[1]]
-  }
-  updateInputOptions(session, inputId, label, choices, selected,
-    inline, 'radio', choiceNames, choiceValues)
+  if (is.null(selected) && !is.null(choices)) selected <- choices[[1]]
+  updateInputOptions(session, inputId, label, choices, selected, inline, type = 'radio')
 }


@@ -613,7 +601,8 @@ updateRadioButtons <- function(session, inputId, label = NULL, choices = NULL,
 updateSelectInput <- function(session, inputId, label = NULL, choices = NULL,
                              selected = NULL) {
  choices <- if (!is.null(choices)) choicesWithNames(choices)
-  if (!is.null(selected)) selected <- as.character(selected)
+  if (!is.null(selected))
+    selected <- validateSelected(selected, choices, inputId)
  options <- if (!is.null(choices)) selectOptions(choices, selected)
  message <- dropNulls(list(label = label, options = options, value = selected))
  session$sendInputMessage(inputId, message)
@@ -655,7 +644,7 @@ updateSelectizeInput <- function(session, inputId, label = NULL, choices = NULL,
 selectizeJSON <- function(data, req) {
  query <- parseQueryString(req$QUERY_STRING)
  # extract the query variables, conjunction (and/or), search string, maximum options
-  var <- c(safeFromJSON(query$field))
+  var <- c(jsonlite::fromJSON(query$field))
  cjn <- if (query$conju == 'and') all else any
  # all keywords in lower-case, for case-insensitive matching
  key <- unique(strsplit(tolower(query$query), '\\s+')[[1]])
--- a/R/utils.R
+++ b/R/utils.R
@@ -43,43 +43,53 @@ repeatable <- function(rngfunc, seed = stats::runif(1, 0, .Machine$integer.max))
  }
 }

+# Temporarily set x in env to value, evaluate expr, and
+# then restore x to its original state
+withTemporary <- function(env, x, value, expr, unset = FALSE) {
+
+  if (exists(x, envir = env, inherits = FALSE)) {
+    oldValue <- get(x, envir = env, inherits = FALSE)
+    on.exit(
+      assign(x, oldValue, envir = env, inherits = FALSE),
+      add = TRUE)
+  } else {
+    on.exit(
+      rm(list = x, envir = env, inherits = FALSE),
+      add = TRUE
+    )
+  }
+
+  if (!missing(value) && !isTRUE(unset))
+    assign(x, value, envir = env, inherits = FALSE)
+  else {
+    if (exists(x, envir = env, inherits = FALSE))
+      rm(list = x, envir = env, inherits = FALSE)
+  }
+  force(expr)
+}
+
 .globals$ownSeed <- NULL
 # Evaluate an expression using Shiny's own private stream of
 # randomness (not affected by set.seed).
 withPrivateSeed <- function(expr) {
-  # Save the old seed if present.
-  if (exists(".Random.seed", envir = .GlobalEnv, inherits = FALSE)) {
-    hasOrigSeed <- TRUE
-    origSeed <- .GlobalEnv$.Random.seed
-  } else {
-    hasOrigSeed <- FALSE
-  }
-
-  # Swap in the private seed.
-  if (is.null(.globals$ownSeed)) {
-    if (hasOrigSeed) {
-      # Move old seed out of the way if present.
-      rm(.Random.seed, envir = .GlobalEnv, inherits = FALSE)
+  withTemporary(.GlobalEnv, ".Random.seed",
+    .globals$ownSeed, unset=is.null(.globals$ownSeed), {
+      tryCatch({
+        expr
+      }, finally = {
+        .globals$ownSeed <- getExists('.Random.seed', 'numeric', globalenv())
+      })
    }
-  } else {
-    .GlobalEnv$.Random.seed <- .globals$ownSeed
-  }
+  )
+}

-  # On exit, save the modified private seed, and put the old seed back.
-  on.exit({
-    .globals$ownSeed <- .GlobalEnv$.Random.seed
-
-    if (hasOrigSeed) {
-      .GlobalEnv$.Random.seed <- origSeed
-    } else {
-      rm(.Random.seed, envir = .GlobalEnv, inherits = FALSE)
-    }
-    # Need to call this to make sure that the value of .Random.seed gets put
-    # into R's internal RNG state. (Issue #1763)
-    httpuv::getRNGState()
-  })
-
-  expr
+# a homemade version of set.seed(NULL) for backward compatibility with R 2.15.x
+reinitializeSeed <- if (getRversion() >= '3.0.0') {
+  function() set.seed(NULL)
+} else function() {
+  if (exists('.Random.seed', globalenv()))
+    rm(list = '.Random.seed', pos = globalenv())
+  stats::runif(1)  # generate any random numbers so R can reinitialize the seed
 }

 # Version of runif that runs with private seed
@@ -215,7 +225,7 @@ sortByName <- function(x) {
 # R >=3.2.0, this wrapper is not necessary.
 list2env2 <- function(x, ...) {
  # Ensure that zero-length lists have a name attribute
-  if (length(x) == 0)
+   if (length(x) == 0)
    attr(x, "names") <- character(0)

  list2env(x, ...)
@@ -566,6 +576,20 @@ parseQueryString <- function(str, nested = FALSE) {
  res
 }

+parseQueryStringJSON <- function(str, nested = FALSE) {
+  vals <- parseQueryString(str, nested)
+  mapply(names(vals), vals, SIMPLIFY = FALSE,
+    FUN = function(name, value) {
+      tryCatch(
+        jsonlite::fromJSON(value),
+        error = function(e) {
+          stop("Failed to parse URL parameter \"", name, "\"")
+        }
+      )
+    }
+  )
+}
+
 # Assign value to the bottom element of the list x using recursive indices idx
 assignNestedList <- function(x = list(), idx, value) {
  for (i in seq_along(idx)) {
@@ -662,9 +686,6 @@ Callbacks <- R6Class(
      .callbacks <<- Map$new()
    },
    register = function(callback) {
-      if (!is.function(callback)) {
-        stop("callback must be a function")
-      }
      id <- as.character(.nextId)
      .nextId <<- .nextId - 1L
      .callbacks$set(id, callback)
@@ -1578,3 +1599,9 @@ Mutable <- R6Class("Mutable",
    get = function() { private$value }
  )
 )
+
+# Turn a value into a no-arg function that returns that value
+valueToFunc <- function(val) {
+  force(val)
+  function() val
+}
--- a/README.md
+++ b/README.md
@@ -14,9 +14,9 @@ For an introduction and examples, visit the [Shiny Dev Center](http://shiny.rstu
 * Shiny applications are automatically "live" in the same way that spreadsheets are live. Outputs change instantly as users modify inputs, without requiring a reload of the browser.
 * Shiny user interfaces can be built entirely using R, or can be written directly in HTML, CSS, and JavaScript for more flexibility.
 * Works in any R environment (Console R, Rgui for Windows or Mac, ESS, StatET, RStudio, etc.).
-* Attractive default UI theme based on [Bootstrap](http://getbootstrap.com/).
+* Attractive default UI theme based on [Bootstrap](http://getbootstrap.com/2.3.2/).
 * A highly customizable slider widget with built-in support for animation.
-* Prebuilt output widgets for displaying plots, tables, and printed output of R objects.
+* Pre-built output widgets for displaying plots, tables, and printed output of R objects.
 * Fast bidirectional communication between the web browser and R using the [httpuv](https://github.com/rstudio/httpuv) package.
 * Uses a [reactive](http://en.wikipedia.org/wiki/Reactive_programming) programming model that eliminates messy event handling code, so you can focus on the code that really matters.
 * Develop and redistribute your own Shiny widgets that other developers can easily drop into their own applications (coming soon!).
--- a/inst/examples/01_hello/Readme.md
+++ b/inst/examples/01_hello/Readme.md
@@ -1,3 +1,4 @@
-This small Shiny application demonstrates Shiny's automatic UI updates. 
-
-Move the *Number of bins* slider and notice how the `renderPlot` expression is automatically re-evaluated when its dependant, `input$bins`, changes, causing a histogram with a new number of bins to be rendered.
+This small Shiny application demonstrates Shiny's automatic UI updates. Move
+the *Number of bins* slider and notice how the `renderPlot` expression is
+automatically re-evaluated when its dependant, `input$bins`, changes,
+causing a histogram with a new number of bins to be rendered.
--- a/inst/examples/01_hello/app.R
+++ b/inst/examples/01_hello/app.R
@@ -1,59 +0,0 @@
-library(shiny)
-
-# Define UI for app that draws a histogram ----
-ui <- fluidPage(
-
-  # App title ----
-  titlePanel("Hello Shiny!"),
-
-  # Sidebar layout with input and output definitions ----
-  sidebarLayout(
-
-    # Sidebar panel for inputs ----
-    sidebarPanel(
-
-      # Input: Slider for the number of bins ----
-      sliderInput(inputId = "bins",
-                  label = "Number of bins:",
-                  min = 1,
-                  max = 50,
-                  value = 30)
-
-    ),
-
-    # Main panel for displaying outputs ----
-    mainPanel(
-
-      # Output: Histogram ----
-      plotOutput(outputId = "distPlot")
-
-    )
-  )
-)
-
-# Define server logic required to draw a histogram ----
-server <- function(input, output) {
-
-  # Histogram of the Old Faithful Geyser Data ----
-  # with requested number of bins
-  # This expression that generates a histogram is wrapped in a call
-  # to renderPlot to indicate that:
-  #
-  # 1. It is "reactive" and therefore should be automatically
-  #    re-executed when inputs (input$bins) change
-  # 2. Its output type is a plot
-  output$distPlot <- renderPlot({
-
-    x    <- faithful$waiting
-    bins <- seq(min(x), max(x), length.out = input$bins + 1)
-
-    hist(x, breaks = bins, col = "#75AADB", border = "white",
-         xlab = "Waiting time to next eruption (in mins)",
-         main = "Histogram of waiting times")
-
-    })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui = ui, server = server)
--- a/inst/examples/01_hello/server.R
+++ b/inst/examples/01_hello/server.R
@@ -0,0 +1,21 @@
+library(shiny)
+
+# Define server logic required to draw a histogram
+function(input, output) {
+
+  # Expression that generates a histogram. The expression is
+  # wrapped in a call to renderPlot to indicate that:
+  #
+  #  1) It is "reactive" and therefore should be automatically
+  #     re-executed when inputs change
+  #  2) Its output type is a plot
+
+  output$distPlot <- renderPlot({
+    x    <- faithful[, 2]  # Old Faithful Geyser data
+    bins <- seq(min(x), max(x), length.out = input$bins + 1)
+
+    # draw the histogram with the specified number of bins
+    hist(x, breaks = bins, col = 'darkgray', border = 'white')
+  })
+
+}
--- a/inst/examples/01_hello/ui.R
+++ b/inst/examples/01_hello/ui.R
@@ -0,0 +1,24 @@
+library(shiny)
+
+# Define UI for application that draws a histogram
+fluidPage(
+
+  # Application title
+  titlePanel("Hello Shiny!"),
+
+  # Sidebar with a slider input for the number of bins
+  sidebarLayout(
+    sidebarPanel(
+      sliderInput("bins",
+                  "Number of bins:",
+                  min = 1,
+                  max = 50,
+                  value = 30)
+    ),
+
+    # Show a plot of the generated distribution
+    mainPanel(
+      plotOutput("distPlot")
+    )
+  )
+)
--- a/inst/examples/02_text/Readme.md
+++ b/inst/examples/02_text/Readme.md
@@ -1 +1 @@
-This example demonstrates output of raw text from R using the `renderPrint` function in `server` and the `verbatimTextOutput` function in `ui`. In this case, a textual summary of the data is shown using R's built-in `summary` function. 
+This example demonstrates output of raw text from R using the `renderPrint` function in `server.R` and the `verbatimTextOutput` function in `ui.R`. In this case, a textual summary of the data is shown using R's built-in `summary` function. 
--- a/inst/examples/02_text/app.R
+++ b/inst/examples/02_text/app.R
@@ -1,64 +0,0 @@
-library(shiny)
-
-# Define UI for dataset viewer app ----
-ui <- fluidPage(
-
-  # App title ----
-  titlePanel("Shiny Text"),
-
-  # Sidebar layout with a input and output definitions ----
-  sidebarLayout(
-
-    # Sidebar panel for inputs ----
-    sidebarPanel(
-
-      # Input: Selector for choosing dataset ----
-      selectInput(inputId = "dataset",
-                  label = "Choose a dataset:",
-                  choices = c("rock", "pressure", "cars")),
-
-      # Input: Numeric entry for number of obs to view ----
-      numericInput(inputId = "obs",
-                   label = "Number of observations to view:",
-                   value = 10)
-    ),
-
-    # Main panel for displaying outputs ----
-    mainPanel(
-
-      # Output: Verbatim text for data summary ----
-      verbatimTextOutput("summary"),
-
-      # Output: HTML table with requested number of observations ----
-      tableOutput("view")
-
-    )
-  )
-)
-
-# Define server logic to summarize and view selected dataset ----
-server <- function(input, output) {
-
-  # Return the requested dataset ----
-  datasetInput <- reactive({
-    switch(input$dataset,
-           "rock" = rock,
-           "pressure" = pressure,
-           "cars" = cars)
-  })
-
-  # Generate a summary of the dataset ----
-  output$summary <- renderPrint({
-    dataset <- datasetInput()
-    summary(dataset)
-  })
-
-  # Show the first "n" observations ----
-  output$view <- renderTable({
-    head(datasetInput(), n = input$obs)
-  })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui = ui, server = server)
--- a/inst/examples/02_text/server.R
+++ b/inst/examples/02_text/server.R
@@ -0,0 +1,26 @@
+library(shiny)
+library(datasets)
+
+# Define server logic required to summarize and view the selected
+# dataset
+function(input, output) {
+  
+  # Return the requested dataset
+  datasetInput <- reactive({
+    switch(input$dataset,
+           "rock" = rock,
+           "pressure" = pressure,
+           "cars" = cars)
+  })
+  
+  # Generate a summary of the dataset
+  output$summary <- renderPrint({
+    dataset <- datasetInput()
+    summary(dataset)
+  })
+  
+  # Show the first "n" observations
+  output$view <- renderTable({
+    head(datasetInput(), n = input$obs)
+  })
+}
--- a/inst/examples/02_text/ui.R
+++ b/inst/examples/02_text/ui.R
@@ -0,0 +1,27 @@
+library(shiny)
+
+# Define UI for dataset viewer application
+fluidPage(
+  
+  # Application title
+  titlePanel("Shiny Text"),
+  
+  # Sidebar with controls to select a dataset and specify the
+  # number of observations to view
+  sidebarLayout(
+    sidebarPanel(
+      selectInput("dataset", "Choose a dataset:", 
+                  choices = c("rock", "pressure", "cars")),
+      
+      numericInput("obs", "Number of observations to view:", 10)
+    ),
+    
+    # Show a summary of the dataset and an HTML table with the 
+	 # requested number of observations
+    mainPanel(
+      verbatimTextOutput("summary"),
+      
+      tableOutput("view")
+    )
+  )
+)
--- a/inst/examples/03_reactivity/Readme.md
+++ b/inst/examples/03_reactivity/Readme.md
@@ -1,5 +1,5 @@
-This example demonstrates a core feature of Shiny: **reactivity**. In the `server` function, a reactive called `datasetInput` is declared. 
+This example demonstrates a core feature of Shiny: **reactivity**. In `server.R`, a reactive called `datasetInput` is declared. 

-Notice that the reactive expression depends on the input expression `input$dataset`, and that it's used by two output expressions: `output$summary` and `output$view`. Try changing the dataset (using *Choose a dataset*) while looking at the reactive and then at the outputs; you will see first the reactive and then its dependencies flash. 
+Notice that the reactive expression depends on the input expression `input$dataset`, and that it's used by both the output expression `output$summary` and `output$view`. Try changing the dataset (using *Choose a dataset*) while looking at the reactive and then at the outputs; you will see first the reactive and then its dependencies flash. 

 Notice also that the reactive expression doesn't just update whenever anything changes--only the inputs it depends on will trigger an update. Change the "Caption" field and notice how only the `output$caption` expression is re-evaluated; the reactive and its dependents are left alone.
--- a/inst/examples/03_reactivity/app.R
+++ b/inst/examples/03_reactivity/app.R
@@ -1,102 +0,0 @@
-library(shiny)
-
-# Define UI for dataset viewer app ----
-ui <- fluidPage(
-
-  # App title ----
-  titlePanel("Reactivity"),
-
-  # Sidebar layout with input and output definitions ----
-  sidebarLayout(
-
-    # Sidebar panel for inputs ----
-    sidebarPanel(
-
-      # Input: Text for providing a caption ----
-      # Note: Changes made to the caption in the textInput control
-      # are updated in the output area immediately as you type
-      textInput(inputId = "caption",
-                label = "Caption:",
-                value = "Data Summary"),
-
-      # Input: Selector for choosing dataset ----
-      selectInput(inputId = "dataset",
-                  label = "Choose a dataset:",
-                  choices = c("rock", "pressure", "cars")),
-
-      # Input: Numeric entry for number of obs to view ----
-      numericInput(inputId = "obs",
-                   label = "Number of observations to view:",
-                   value = 10)
-
-    ),
-
-    # Main panel for displaying outputs ----
-    mainPanel(
-
-      # Output: Formatted text for caption ----
-      h3(textOutput("caption", container = span)),
-
-      # Output: Verbatim text for data summary ----
-      verbatimTextOutput("summary"),
-
-      # Output: HTML table with requested number of observations ----
-      tableOutput("view")
-
-    )
-  )
-)
-
-# Define server logic to summarize and view selected dataset ----
-server <- function(input, output) {
-
-  # Return the requested dataset ----
-  # By declaring datasetInput as a reactive expression we ensure
-  # that:
-  #
-  # 1. It is only called when the inputs it depends on changes
-  # 2. The computation and result are shared by all the callers,
-  #    i.e. it only executes a single time
-  datasetInput <- reactive({
-    switch(input$dataset,
-           "rock" = rock,
-           "pressure" = pressure,
-           "cars" = cars)
-  })
-
-  # Create caption ----
-  # The output$caption is computed based on a reactive expression
-  # that returns input$caption. When the user changes the
-  # "caption" field:
-  #
-  # 1. This function is automatically called to recompute the output
-  # 2. New caption is pushed back to the browser for re-display
-  #
-  # Note that because the data-oriented reactive expressions
-  # below don't depend on input$caption, those expressions are
-  # NOT called when input$caption changes
-  output$caption <- renderText({
-    input$caption
-  })
-
-  # Generate a summary of the dataset ----
-  # The output$summary depends on the datasetInput reactive
-  # expression, so will be re-executed whenever datasetInput is
-  # invalidated, i.e. whenever the input$dataset changes
-  output$summary <- renderPrint({
-    dataset <- datasetInput()
-    summary(dataset)
-  })
-
-  # Show the first "n" observations ----
-  # The output$view depends on both the databaseInput reactive
-  # expression and input$obs, so it will be re-executed whenever
-  # input$dataset or input$obs is changed
-  output$view <- renderTable({
-    head(datasetInput(), n = input$obs)
-  })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui, server)
--- a/inst/examples/03_reactivity/server.R
+++ b/inst/examples/03_reactivity/server.R
@@ -0,0 +1,53 @@
+library(shiny)
+library(datasets)
+
+# Define server logic required to summarize and view the selected
+# dataset
+function(input, output) {
+
+  # By declaring datasetInput as a reactive expression we ensure 
+  # that:
+  #
+  #  1) It is only called when the inputs it depends on changes
+  #  2) The computation and result are shared by all the callers 
+  #	  (it only executes a single time)
+  #
+  datasetInput <- reactive({
+    switch(input$dataset,
+           "rock" = rock,
+           "pressure" = pressure,
+           "cars" = cars)
+  })
+  
+  # The output$caption is computed based on a reactive expression
+  # that returns input$caption. When the user changes the
+  # "caption" field:
+  #
+  #  1) This function is automatically called to recompute the 
+  #     output 
+  #  2) The new caption is pushed back to the browser for 
+  #     re-display
+  # 
+  # Note that because the data-oriented reactive expressions
+  # below don't depend on input$caption, those expressions are
+  # NOT called when input$caption changes.
+  output$caption <- renderText({
+    input$caption
+  })
+  
+  # The output$summary depends on the datasetInput reactive
+  # expression, so will be re-executed whenever datasetInput is
+  # invalidated
+  # (i.e. whenever the input$dataset changes)
+  output$summary <- renderPrint({
+    dataset <- datasetInput()
+    summary(dataset)
+  })
+  
+  # The output$view depends on both the databaseInput reactive
+  # expression and input$obs, so will be re-executed whenever
+  # input$dataset or input$obs is changed. 
+  output$view <- renderTable({
+    head(datasetInput(), n = input$obs)
+  })
+}
--- a/inst/examples/03_reactivity/ui.R
+++ b/inst/examples/03_reactivity/ui.R
@@ -0,0 +1,34 @@
+library(shiny)
+
+# Define UI for dataset viewer application
+fluidPage(
+  
+  # Application title
+  titlePanel("Reactivity"),
+  
+  # Sidebar with controls to provide a caption, select a dataset,
+  # and specify the number of observations to view. Note that
+  # changes made to the caption in the textInput control are
+  # updated in the output area immediately as you type
+  sidebarLayout(
+    sidebarPanel(
+      textInput("caption", "Caption:", "Data Summary"),
+      
+      selectInput("dataset", "Choose a dataset:", 
+                  choices = c("rock", "pressure", "cars")),
+      
+      numericInput("obs", "Number of observations to view:", 10)
+    ),
+    
+    
+    # Show the caption, a summary of the dataset and an HTML 
+	 # table with the requested number of observations
+    mainPanel(
+      h3(textOutput("caption", container = span)),
+      
+      verbatimTextOutput("summary"), 
+      
+      tableOutput("view")
+    )
+  )
+)
--- a/inst/examples/04_mpg/Readme.md
+++ b/inst/examples/04_mpg/Readme.md
@@ -1,4 +1,4 @@
 This example demonstrates the following concepts:

- **Global variables**: The `mpgData` variable is declared outside of the `ui` and `server` function definitions. This makes it available anywhere inside `app.R`. The code in `app.R` outside of `ui` and `server` function definitions is only run once when the app starts up, so it can't contain user input.
- **Reactive expressions**: `formulaText` is a reactive expression. Note how it re-evaluates when the Variable field is changed, but not when the Show Outliers box is unchecked. 
+* **Global variables**: The `mpgData` variable is declared outside the `shinyServer` function. This makes it available anywhere inside `shinyServer`. The code in `server.R` outside `shinyServer` is only run once when the app starts up, so it can't contain user input.
+* **Reactive expressions**: `formulaText` is a reactive expression. Note how it re-evaluates when the Variable field is changed, but not when the Show Outliers box is ticked. 
--- a/inst/examples/04_mpg/app.R
+++ b/inst/examples/04_mpg/app.R
@@ -1,75 +0,0 @@
-library(shiny)
-library(datasets)
-
-# Data pre-processing ----
-# Tweak the "am" variable to have nicer factor labels -- since this
-# doesn't rely on any user inputs, we can do this once at startup
-# and then use the value throughout the lifetime of the app
-mpgData <- mtcars
-mpgData$am <- factor(mpgData$am, labels = c("Automatic", "Manual"))
-
-
-# Define UI for miles per gallon app ----
-ui <- fluidPage(
-
-  # App title ----
-  titlePanel("Miles Per Gallon"),
-
-  # Sidebar layout with input and output definitions ----
-  sidebarLayout(
-
-    # Sidebar panel for inputs ----
-    sidebarPanel(
-
-      # Input: Selector for variable to plot against mpg ----
-      selectInput("variable", "Variable:",
-                  c("Cylinders" = "cyl",
-                    "Transmission" = "am",
-                    "Gears" = "gear")),
-
-      # Input: Checkbox for whether outliers should be included ----
-      checkboxInput("outliers", "Show outliers", TRUE)
-
-    ),
-
-    # Main panel for displaying outputs ----
-    mainPanel(
-
-      # Output: Formatted text for caption ----
-      h3(textOutput("caption")),
-
-      # Output: Plot of the requested variable against mpg ----
-      plotOutput("mpgPlot")
-
-    )
-  )
-)
-
-# Define server logic to plot various variables against mpg ----
-server <- function(input, output) {
-
-  # Compute the formula text ----
-  # This is in a reactive expression since it is shared by the
-  # output$caption and output$mpgPlot functions
-  formulaText <- reactive({
-    paste("mpg ~", input$variable)
-  })
-
-  # Return the formula text for printing as a caption ----
-  output$caption <- renderText({
-    formulaText()
-  })
-
-  # Generate a plot of the requested variable against mpg ----
-  # and only exclude outliers if requested
-  output$mpgPlot <- renderPlot({
-    boxplot(as.formula(formulaText()),
-            data = mpgData,
-            outline = input$outliers,
-            col = "#75AADB", pch = 19)
-  })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui, server)
--- a/inst/examples/04_mpg/server.R
+++ b/inst/examples/04_mpg/server.R
@@ -0,0 +1,34 @@
+library(shiny)
+library(datasets)
+
+# We tweak the "am" field to have nicer factor labels. Since
+# this doesn't rely on any user inputs we can do this once at
+# startup and then use the value throughout the lifetime of the
+# application
+mpgData <- mtcars
+mpgData$am <- factor(mpgData$am, labels = c("Automatic", "Manual"))
+
+
+# Define server logic required to plot various variables against
+# mpg
+function(input, output) {
+
+  # Compute the formula text in a reactive expression since it is
+  # shared by the output$caption and output$mpgPlot functions
+  formulaText <- reactive({
+    paste("mpg ~", input$variable)
+  })
+
+  # Return the formula text for printing as a caption
+  output$caption <- renderText({
+    formulaText()
+  })
+
+  # Generate a plot of the requested variable against mpg and
+  # only include outliers if requested
+  output$mpgPlot <- renderPlot({
+    boxplot(as.formula(formulaText()),
+            data = mpgData,
+            outline = input$outliers)
+  })
+}
--- a/inst/examples/04_mpg/ui.R
+++ b/inst/examples/04_mpg/ui.R
@@ -0,0 +1,29 @@
+library(shiny)
+
+# Define UI for miles per gallon application
+fluidPage(
+  
+  # Application title
+  titlePanel("Miles Per Gallon"),
+  
+  # Sidebar with controls to select the variable to plot against
+  # mpg and to specify whether outliers should be included
+  sidebarLayout(
+    sidebarPanel(
+      selectInput("variable", "Variable:",
+                  c("Cylinders" = "cyl",
+                    "Transmission" = "am",
+                    "Gears" = "gear")),
+  
+      checkboxInput("outliers", "Show outliers", FALSE)
+    ),
+    
+	 # Show the caption and plot of the requested variable against
+	 # mpg
+    mainPanel(
+      h3(textOutput("caption")),
+      
+      plotOutput("mpgPlot")
+    )
+  )
+)
--- a/inst/examples/05_sliders/app.R
+++ b/inst/examples/05_sliders/app.R
@@ -1,86 +0,0 @@
-library(shiny)
-
-# Define UI for slider demo app ----
-ui <- fluidPage(
-
-  # App title ----
-  titlePanel("Sliders"),
-
-  # Sidebar layout with input and output definitions ----
-  sidebarLayout(
-
-    # Sidebar to demonstrate various slider options ----
-    sidebarPanel(
-
-      # Input: Simple integer interval ----
-      sliderInput("integer", "Integer:",
-                  min = 0, max = 1000,
-                  value = 500),
-
-      # Input: Decimal interval with step value ----
-      sliderInput("decimal", "Decimal:",
-                  min = 0, max = 1,
-                  value = 0.5, step = 0.1),
-
-      # Input: Specification of range within an interval ----
-      sliderInput("range", "Range:",
-                  min = 1, max = 1000,
-                  value = c(200,500)),
-
-      # Input: Custom currency format for with basic animation ----
-      sliderInput("format", "Custom Format:",
-                  min = 0, max = 10000,
-                  value = 0, step = 2500,
-                  pre = "$", sep = ",",
-                  animate = TRUE),
-
-      # Input: Animation with custom interval (in ms) ----
-      # to control speed, plus looping
-      sliderInput("animation", "Looping Animation:",
-                  min = 1, max = 2000,
-                  value = 1, step = 10,
-                  animate =
-                    animationOptions(interval = 300, loop = TRUE))
-
-    ),
-
-    # Main panel for displaying outputs ----
-    mainPanel(
-
-      # Output: Table summarizing the values entered ----
-      tableOutput("values")
-
-    )
-  )
-)
-
-# Define server logic for slider examples ----
-server <- function(input, output) {
-
-  # Reactive expression to create data frame of all input values ----
-  sliderValues <- reactive({
-
-    data.frame(
-      Name = c("Integer",
-               "Decimal",
-               "Range",
-               "Custom Format",
-               "Animation"),
-      Value = as.character(c(input$integer,
-                             input$decimal,
-                             paste(input$range, collapse = " "),
-                             input$format,
-                             input$animation)),
-      stringsAsFactors = FALSE)
-
-  })
-
-  # Show the values in an HTML table ----
-  output$values <- renderTable({
-    sliderValues()
-  })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui, server)
--- a/inst/examples/05_sliders/server.R
+++ b/inst/examples/05_sliders/server.R
@@ -0,0 +1,29 @@
+library(shiny)
+
+# Define server logic for slider examples
+function(input, output) {
+  
+  # Reactive expression to compose a data frame containing all of
+  # the values
+  sliderValues <- reactive({
+    
+    # Compose data frame
+    data.frame(
+      Name = c("Integer", 
+               "Decimal",
+               "Range",
+               "Custom Format",
+               "Animation"),
+      Value = as.character(c(input$integer, 
+                             input$decimal,
+                             paste(input$range, collapse=' '),
+                             input$format,
+                             input$animation)), 
+      stringsAsFactors=FALSE)
+  }) 
+  
+  # Show the values using an HTML table
+  output$values <- renderTable({
+    sliderValues()
+  })
+}
--- a/inst/examples/05_sliders/ui.R
+++ b/inst/examples/05_sliders/ui.R
@@ -0,0 +1,43 @@
+library(shiny)
+
+# Define UI for slider demo application
+fluidPage(
+
+  #  Application title
+  titlePanel("Sliders"),
+
+  # Sidebar with sliders that demonstrate various available
+  # options
+  sidebarLayout(
+    sidebarPanel(
+      # Simple integer interval
+      sliderInput("integer", "Integer:",
+                  min=0, max=1000, value=500),
+
+      # Decimal interval with step value
+      sliderInput("decimal", "Decimal:",
+                  min = 0, max = 1, value = 0.5, step= 0.1),
+
+      # Specification of range within an interval
+      sliderInput("range", "Range:",
+                  min = 1, max = 1000, value = c(200,500)),
+
+      # Provide a custom currency format for value display,
+		# with basic animation
+      sliderInput("format", "Custom Format:",
+                  min = 0, max = 10000, value = 0, step = 2500,
+                  pre = "$", sep = ",", animate=TRUE),
+
+      # Animation with custom interval (in ms) to control speed,
+		# plus looping
+      sliderInput("animation", "Looping Animation:", 1, 2000, 1,
+					  	step = 10, animate=
+							animationOptions(interval=300, loop=TRUE))
+    ),
+
+    # Show a table summarizing the values entered
+    mainPanel(
+      tableOutput("values")
+    )
+  )
+)
--- a/inst/examples/06_tabsets/Readme.md
+++ b/inst/examples/06_tabsets/Readme.md
@@ -2,7 +2,7 @@ This example demonstrates the `tabsetPanel` and `tabPanel` widgets.

 Notice that outputs that are not visible are not re-evaluated until they become visible. Try this: 

-1. Scroll to the bottom of the `server` function. You might need to use the *show with app* option so you can easily view the code and interact with the app at the same time.
+1. Scroll to the bottom of `server.R`
 2. Change the number of observations, and observe that only `output$plot` is evaluated.
 3. Click the Summary tab, and observe that `output$summary` is evaluated.
 4. Change the number of observations again, and observe that now only `output$summary` is evaluated.
--- a/inst/examples/06_tabsets/app.R
+++ b/inst/examples/06_tabsets/app.R
@@ -1,92 +0,0 @@
-library(shiny)
-
-# Define UI for random distribution app ----
-ui <- fluidPage(
-
-  # App title ----
-  titlePanel("Tabsets"),
-
-  # Sidebar layout with input and output definitions ----
-  sidebarLayout(
-
-    # Sidebar panel for inputs ----
-    sidebarPanel(
-
-      # Input: Select the random distribution type ----
-      radioButtons("dist", "Distribution type:",
-                   c("Normal" = "norm",
-                     "Uniform" = "unif",
-                     "Log-normal" = "lnorm",
-                     "Exponential" = "exp")),
-
-      # br() element to introduce extra vertical spacing ----
-      br(),
-
-      # Input: Slider for the number of observations to generate ----
-      sliderInput("n",
-                  "Number of observations:",
-                  value = 500,
-                  min = 1,
-                  max = 1000)
-
-    ),
-
-    # Main panel for displaying outputs ----
-    mainPanel(
-
-      # Output: Tabset w/ plot, summary, and table ----
-      tabsetPanel(type = "tabs",
-                  tabPanel("Plot", plotOutput("plot")),
-                  tabPanel("Summary", verbatimTextOutput("summary")),
-                  tabPanel("Table", tableOutput("table"))
-      )
-
-    )
-  )
-)
-
-# Define server logic for random distribution app ----
-server <- function(input, output) {
-
-  # Reactive expression to generate the requested distribution ----
-  # This is called whenever the inputs change. The output functions
-  # defined below then use the value computed from this expression
-  d <- reactive({
-    dist <- switch(input$dist,
-                   norm = rnorm,
-                   unif = runif,
-                   lnorm = rlnorm,
-                   exp = rexp,
-                   rnorm)
-
-    dist(input$n)
-  })
-
-  # Generate a plot of the data ----
-  # Also uses the inputs to build the plot label. Note that the
-  # dependencies on the inputs and the data reactive expression are
-  # both tracked, and all expressions are called in the sequence
-  # implied by the dependency graph.
-  output$plot <- renderPlot({
-    dist <- input$dist
-    n <- input$n
-
-    hist(d(),
-         main = paste("r", dist, "(", n, ")", sep = ""),
-         col = "#75AADB", border = "white")
-  })
-
-  # Generate a summary of the data ----
-  output$summary <- renderPrint({
-    summary(d())
-  })
-
-  # Generate an HTML table view of the data ----
-  output$table <- renderTable({
-    d()
-  })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui, server)
--- a/inst/examples/06_tabsets/server.R
+++ b/inst/examples/06_tabsets/server.R
@@ -0,0 +1,44 @@
+library(shiny)
+
+# Define server logic for random distribution application
+function(input, output) {
+  
+  # Reactive expression to generate the requested distribution.
+  # This is called whenever the inputs change. The output
+  # functions defined below then all use the value computed from
+  # this expression
+  data <- reactive({
+    dist <- switch(input$dist,
+                   norm = rnorm,
+                   unif = runif,
+                   lnorm = rlnorm,
+                   exp = rexp,
+                   rnorm)
+    
+    dist(input$n)
+  })
+  
+  # Generate a plot of the data. Also uses the inputs to build
+  # the plot label. Note that the dependencies on both the inputs
+  # and the data reactive expression are both tracked, and
+  # all expressions are called in the sequence implied by the
+  # dependency graph
+  output$plot <- renderPlot({
+    dist <- input$dist
+    n <- input$n
+    
+    hist(data(), 
+         main=paste('r', dist, '(', n, ')', sep=''))
+  })
+  
+  # Generate a summary of the data
+  output$summary <- renderPrint({
+    summary(data())
+  })
+  
+  # Generate an HTML table view of the data
+  output$table <- renderTable({
+    data.frame(x=data())
+  })
+  
+}
--- a/inst/examples/06_tabsets/ui.R
+++ b/inst/examples/06_tabsets/ui.R
@@ -0,0 +1,38 @@
+library(shiny)
+
+# Define UI for random distribution application 
+fluidPage(
+    
+  # Application title
+  titlePanel("Tabsets"),
+  
+  # Sidebar with controls to select the random distribution type
+  # and number of observations to generate. Note the use of the
+  # br() element to introduce extra vertical spacing
+  sidebarLayout(
+    sidebarPanel(
+      radioButtons("dist", "Distribution type:",
+                   c("Normal" = "norm",
+                     "Uniform" = "unif",
+                     "Log-normal" = "lnorm",
+                     "Exponential" = "exp")),
+      br(),
+      
+      sliderInput("n", 
+                  "Number of observations:", 
+                   value = 500,
+                   min = 1, 
+                   max = 1000)
+    ),
+    
+    # Show a tabset that includes a plot, summary, and table view
+    # of the generated distribution
+    mainPanel(
+      tabsetPanel(type = "tabs", 
+        tabPanel("Plot", plotOutput("plot")), 
+        tabPanel("Summary", verbatimTextOutput("summary")), 
+        tabPanel("Table", tableOutput("table"))
+      )
+    )
+  )
+)
--- a/inst/examples/07_widgets/app.R
+++ b/inst/examples/07_widgets/app.R
@@ -1,82 +0,0 @@
-library(shiny)
-
-# Define UI for dataset viewer app ----
-ui <- fluidPage(
-
-  # App title ----
-  titlePanel("More Widgets"),
-
-  # Sidebar layout with input and output definitions ----
-  sidebarLayout(
-
-    # Sidebar panel for inputs ----
-    sidebarPanel(
-
-      # Input: Select a dataset ----
-      selectInput("dataset", "Choose a dataset:",
-                  choices = c("rock", "pressure", "cars")),
-
-      # Input: Specify the number of observations to view ----
-      numericInput("obs", "Number of observations to view:", 10),
-
-      # Include clarifying text ----
-      helpText("Note: while the data view will show only the specified",
-               "number of observations, the summary will still be based",
-               "on the full dataset."),
-
-      # Input: actionButton() to defer the rendering of output ----
-      # until the user explicitly clicks the button (rather than
-      # doing it immediately when inputs change). This is useful if
-      # the computations required to render output are inordinately
-      # time-consuming.
-      actionButton("update", "Update View")
-
-    ),
-
-    # Main panel for displaying outputs ----
-    mainPanel(
-
-      # Output: Header + summary of distribution ----
-      h4("Summary"),
-      verbatimTextOutput("summary"),
-
-      # Output: Header + table of distribution ----
-      h4("Observations"),
-      tableOutput("view")
-    )
-
-  )
-)
-
-# Define server logic to summarize and view selected dataset ----
-server <- function(input, output) {
-
-  # Return the requested dataset ----
-  # Note that we use eventReactive() here, which depends on
-  # input$update (the action button), so that the output is only
-  # updated when the user clicks the button
-  datasetInput <- eventReactive(input$update, {
-    switch(input$dataset,
-           "rock" = rock,
-           "pressure" = pressure,
-           "cars" = cars)
-  }, ignoreNULL = FALSE)
-
-  # Generate a summary of the dataset ----
-  output$summary <- renderPrint({
-    dataset <- datasetInput()
-    summary(dataset)
-  })
-
-  # Show the first "n" observations ----
-  # The use of isolate() is necessary because we don't want the table
-  # to update whenever input$obs changes (only when the user clicks
-  # the action button)
-  output$view <- renderTable({
-    head(datasetInput(), n = isolate(input$obs))
-  })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui, server)
--- a/inst/examples/07_widgets/server.R
+++ b/inst/examples/07_widgets/server.R
@@ -0,0 +1,32 @@
+library(shiny)
+library(datasets)
+
+# Define server logic required to summarize and view the
+# selected dataset
+function(input, output) {
+
+  # Return the requested dataset. Note that we use `eventReactive()`
+  # here, which takes a dependency on input$update (the action
+  # button), so that the output is only updated when the user
+  # clicks the button.
+  datasetInput <- eventReactive(input$update, {
+    switch(input$dataset,
+           "rock" = rock,
+           "pressure" = pressure,
+           "cars" = cars)
+  }, ignoreNULL = FALSE)
+
+  # Generate a summary of the dataset
+  output$summary <- renderPrint({
+    dataset <- datasetInput()
+    summary(dataset)
+  })
+
+  # Show the first "n" observations. The use of `isolate()` here
+  # is necessary because we don't want the table to update
+  # whenever input$obs changes (only when the user clicks the
+  # action button).
+  output$view <- renderTable({
+    head(datasetInput(), n = isolate(input$obs))
+  })
+}
--- a/inst/examples/07_widgets/ui.R
+++ b/inst/examples/07_widgets/ui.R
@@ -0,0 +1,43 @@
+library(shiny)
+
+# Define UI for dataset viewer application
+fluidPage(
+
+  # Application title.
+  titlePanel("More Widgets"),
+
+  # Sidebar with controls to select a dataset and specify the
+  # number of observations to view. The helpText function is
+  # also used to include clarifying text. Most notably, the
+  # inclusion of an actionButton defers the rendering of output
+  # until the user explicitly clicks the button (rather than
+  # doing it immediately when inputs change). This is useful if
+  # the computations required to render output are inordinately
+  # time-consuming.
+  sidebarLayout(
+    sidebarPanel(
+      selectInput("dataset", "Choose a dataset:",
+                  choices = c("rock", "pressure", "cars")),
+
+      numericInput("obs", "Number of observations to view:", 10),
+
+      helpText("Note: while the data view will show only the specified",
+               "number of observations, the summary will still be based",
+               "on the full dataset."),
+
+      actionButton("update", "Update View")
+    ),
+
+    # Show a summary of the dataset and an HTML table with the
+    # requested number of observations. Note the use of the h4
+    # function to provide an additional header above each output
+    # section.
+    mainPanel(
+      h4("Summary"),
+      verbatimTextOutput("summary"),
+
+      h4("Observations"),
+      tableOutput("view")
+    )
+  )
+)
--- a/inst/examples/08_html/Readme.md
+++ b/inst/examples/08_html/Readme.md
@@ -1 +1,4 @@
-Normally we use the built-in functions, such as `textInput()`, to generate the HTML UI in the R script `ui.R`. Actually **shiny** also works with a custom HTML page `www/index.html`. See [the tutorial](http://shiny.rstudio.com/tutorial/) for more details.
+Normally we use the built-in functions, such as `textInput()`, to generate
+the HTML UI in the R script `ui.R`. Actually **shiny** also works with a
+custom HTML page `www/index.html`. See [the
+tutorial](http://rstudio.github.io/shiny/tutorial/#html-ui) for more details.
--- a/inst/examples/08_html/app.R
+++ b/inst/examples/08_html/app.R
@@ -1,47 +0,0 @@
-library(shiny)
-
-# Define server logic for random distribution app ----
-server <- function(input, output) {
-
-  # Reactive expression to generate the requested distribution ----
-  # This is called whenever the inputs change. The output functions
-  # defined below then use the value computed from this expression
-  d <- reactive({
-    dist <- switch(input$dist,
-                   norm = rnorm,
-                   unif = runif,
-                   lnorm = rlnorm,
-                   exp = rexp,
-                   rnorm)
-
-    dist(input$n)
-  })
-
-  # Generate a plot of the data ----
-  # Also uses the inputs to build the plot label. Note that the
-  # dependencies on the inputs and the data reactive expression are
-  # both tracked, and all expressions are called in the sequence
-  # implied by the dependency graph.
-  output$plot <- renderPlot({
-    dist <- input$dist
-    n <- input$n
-
-    hist(d(),
-         main = paste("r", dist, "(", n, ")", sep = ""),
-         col = "#75AADB", border = "white")
-  })
-
-  # Generate a summary of the data ----
-  output$summary <- renderPrint({
-    summary(d())
-  })
-
-  # Generate an HTML table view of the head of the data ----
-  output$table <- renderTable({
-    head(data.frame(x = d()))
-  })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui = htmlTemplate("www/index.html"), server)
--- a/inst/examples/08_html/server.R
+++ b/inst/examples/08_html/server.R
@@ -0,0 +1,42 @@
+library(shiny)
+
+# Define server logic for random distribution application
+function(input, output) {
+  
+  # Reactive expression to generate the requested distribution. This is 
+  # called whenever the inputs change. The output expressions defined 
+  # below then all used the value computed from this expression
+  data <- reactive({
+    dist <- switch(input$dist,
+                   norm = rnorm,
+                   unif = runif,
+                   lnorm = rlnorm,
+                   exp = rexp,
+                   rnorm)
+    
+    dist(input$n)
+  })
+  
+  # Generate a plot of the data. Also uses the inputs to build the 
+  # plot label. Note that the dependencies on both the inputs and
+  # the data reactive expression are both tracked, and all expressions 
+  # are called in the sequence implied by the dependency graph
+  output$plot <- renderPlot({
+    dist <- input$dist
+    n <- input$n
+    
+    hist(data(), 
+         main=paste('r', dist, '(', n, ')', sep=''))
+  })
+  
+  # Generate a summary of the data
+  output$summary <- renderPrint({
+    summary(data())
+  })
+  
+  # Generate an HTML table view of the data
+  output$table <- renderTable({
+    data.frame(x=data())
+  })
+  
+}
--- a/inst/examples/08_html/www/index.html
+++ b/inst/examples/08_html/www/index.html
@@ -3,13 +3,13 @@
 <head>
  <script src="shared/jquery.js" type="text/javascript"></script>
  <script src="shared/shiny.js" type="text/javascript"></script>
-  <link rel="stylesheet" type="text/css" href="shared/shiny.css"/>
+  <link rel="stylesheet" type="text/css" href="shared/shiny.css"/> 
 </head>
-
+ 
 <body>

  <h1>HTML UI</h1>
-
+ 
  <p>
    <label>Distribution type:</label><br />
    <select name="dist">
@@ -17,25 +17,22 @@
      <option value="unif">Uniform</option>
      <option value="lnorm">Log-normal</option>
      <option value="exp">Exponential</option>
-    </select>
+    </select> 
  </p>
-
+ 
  <p>
-
-    <label>Number of observations:</label><br />
+ 
+    <label>Number of observations:</label><br /> 
    <input type="number" name="n" value="500" min="1" max="1000" />

  </p>
-
-  <h3>Summary of data:</h3>
-  <pre id="summary" class="shiny-text-output"></pre>
-
-  <h3>Plot of data:</h3>
-  <div id="plot" class="shiny-plot-output"
-       style="width: 100%; height: 300px"></div>
-
-  <h3>Head of data:</h3>
+ 
+  <pre id="summary" class="shiny-text-output"></pre> 
+  
+  <div id="plot" class="shiny-plot-output" 
+       style="width: 100%; height: 400px"></div> 
+  
  <div id="table" class="shiny-html-output"></div>
-
+ 
 </body>
-</html>
+</html>
--- a/inst/examples/09_upload/Readme.md
+++ b/inst/examples/09_upload/Readme.md
@@ -1,3 +1,4 @@
 We can add a file upload input in the UI using the function `fileInput()`,
-e.g. `fileInput('foo')`. In the `server` function, we can access the 
-uploaded files via `input$foo`.
+e.g. `fileInput('foo')`. In `server.R`, we can access the uploaded files via
+`input$foo`. See [the
+tutorial](http://rstudio.github.io/shiny/tutorial/#uploads) for more details.
--- a/inst/examples/09_upload/app.R
+++ b/inst/examples/09_upload/app.R
@@ -1,92 +0,0 @@
-library(shiny)
-
-# Define UI for data upload app ----
-ui <- fluidPage(
-
-  # App title ----
-  titlePanel("Uploading Files"),
-
-  # Sidebar layout with input and output definitions ----
-  sidebarLayout(
-
-    # Sidebar panel for inputs ----
-    sidebarPanel(
-
-      # Input: Select a file ----
-      fileInput("file1", "Choose CSV File",
-                multiple = TRUE,
-                accept = c("text/csv",
-                         "text/comma-separated-values,text/plain",
-                         ".csv")),
-
-      # Horizontal line ----
-      tags$hr(),
-
-      # Input: Checkbox if file has header ----
-      checkboxInput("header", "Header", TRUE),
-
-      # Input: Select separator ----
-      radioButtons("sep", "Separator",
-                   choices = c(Comma = ",",
-                               Semicolon = ";",
-                               Tab = "\t"),
-                   selected = ","),
-
-      # Input: Select quotes ----
-      radioButtons("quote", "Quote",
-                   choices = c(None = "",
-                               "Double Quote" = '"',
-                               "Single Quote" = "'"),
-                   selected = '"'),
-
-      # Horizontal line ----
-      tags$hr(),
-
-      # Input: Select number of rows to display ----
-      radioButtons("disp", "Display",
-                   choices = c(Head = "head",
-                               All = "all"),
-                   selected = "head")
-
-    ),
-
-    # Main panel for displaying outputs ----
-    mainPanel(
-
-      # Output: Data file ----
-      tableOutput("contents")
-
-    )
-
-  )
-)
-
-# Define server logic to read selected file ----
-server <- function(input, output) {
-
-  output$contents <- renderTable({
-
-    # input$file1 will be NULL initially. After the user selects
-    # and uploads a file, head of that data file by default,
-    # or all rows if selected, will be shown.
-
-    req(input$file1)
-
-    df <- read.csv(input$file1$datapath,
-             header = input$header,
-             sep = input$sep,
-             quote = input$quote)
-
-    if(input$disp == "head") {
-      return(head(df))
-    }
-    else {
-      return(df)
-    }
-
-  })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui, server)
--- a/inst/examples/09_upload/server.R
+++ b/inst/examples/09_upload/server.R
@@ -0,0 +1,20 @@
+library(shiny)
+
+function(input, output) {
+  output$contents <- renderTable({
+    
+    # input$file1 will be NULL initially. After the user selects
+    # and uploads a file, it will be a data frame with 'name',
+    # 'size', 'type', and 'datapath' columns. The 'datapath'
+    # column will contain the local filenames where the data can
+    # be found.
+
+    inFile <- input$file1
+
+    if (is.null(inFile))
+      return(NULL)
+    
+    read.csv(inFile$datapath, header=input$header, sep=input$sep, 
+				 quote=input$quote)
+  })
+}
--- a/inst/examples/09_upload/ui.R
+++ b/inst/examples/09_upload/ui.R
@@ -0,0 +1,28 @@
+library(shiny)
+
+fluidPage(
+  titlePanel("Uploading Files"),
+  sidebarLayout(
+    sidebarPanel(
+      fileInput('file1', 'Choose CSV File',
+                accept=c('text/csv', 
+								 'text/comma-separated-values,text/plain', 
+								 '.csv')),
+      tags$hr(),
+      checkboxInput('header', 'Header', TRUE),
+      radioButtons('sep', 'Separator',
+                   c(Comma=',',
+                     Semicolon=';',
+                     Tab='\t'),
+                   ','),
+      radioButtons('quote', 'Quote',
+                   c(None='',
+                     'Double Quote'='"',
+                     'Single Quote'="'"),
+                   '"')
+    ),
+    mainPanel(
+      tableOutput('contents')
+    )
+  )
+)
--- a/inst/examples/10_download/Readme.md
+++ b/inst/examples/10_download/Readme.md
@@ -1,2 +1,4 @@
 We can add a download button to the UI using `downloadButton()`, and write
-the content of the file in `downloadHandler()` in the `server` function.
+the content of the file in `downloadHandler()` in `server.R`. See [the
+tutorial](http://rstudio.github.io/shiny/tutorial/#downloads) for more
+details.
--- a/inst/examples/10_download/app.R
+++ b/inst/examples/10_download/app.R
@@ -1,63 +0,0 @@
-library(shiny)
-
-# Define UI for data download app ----
-ui <- fluidPage(
-
-  # App title ----
-  titlePanel("Downloading Data"),
-
-  # Sidebar layout with input and output definitions ----
-  sidebarLayout(
-
-    # Sidebar panel for inputs ----
-    sidebarPanel(
-
-      # Input: Choose dataset ----
-      selectInput("dataset", "Choose a dataset:",
-                  choices = c("rock", "pressure", "cars")),
-
-      # Button
-      downloadButton("downloadData", "Download")
-
-    ),
-
-    # Main panel for displaying outputs ----
-    mainPanel(
-
-      tableOutput("table")
-
-    )
-
-  )
-)
-
-# Define server logic to display and download selected file ----
-server <- function(input, output) {
-
-  # Reactive value for selected dataset ----
-  datasetInput <- reactive({
-    switch(input$dataset,
-           "rock" = rock,
-           "pressure" = pressure,
-           "cars" = cars)
-  })
-
-  # Table of selected dataset ----
-  output$table <- renderTable({
-    datasetInput()
-  })
-
-  # Downloadable csv of selected dataset ----
-  output$downloadData <- downloadHandler(
-    filename = function() {
-      paste(input$dataset, ".csv", sep = "")
-    },
-    content = function(file) {
-      write.csv(datasetInput(), file, row.names = FALSE)
-    }
-  )
-
-}
-
-# Create Shiny app ----
-shinyApp(ui, server)
--- a/inst/examples/10_download/server.R
+++ b/inst/examples/10_download/server.R
@@ -0,0 +1,21 @@
+function(input, output) {
+  datasetInput <- reactive({
+    switch(input$dataset,
+           "rock" = rock,
+           "pressure" = pressure,
+           "cars" = cars)
+  })
+  
+  output$table <- renderTable({
+    datasetInput()
+  })
+  
+  output$downloadData <- downloadHandler(
+    filename = function() { 
+		 paste(input$dataset, '.csv', sep='') 
+	 },
+    content = function(file) {
+      write.csv(datasetInput(), file)
+    }
+  )
+}
--- a/inst/examples/10_download/ui.R
+++ b/inst/examples/10_download/ui.R
@@ -0,0 +1,13 @@
+fluidPage(
+  titlePanel('Downloading Data'),
+  sidebarLayout(
+    sidebarPanel(
+      selectInput("dataset", "Choose a dataset:", 
+                  choices = c("rock", "pressure", "cars")),
+      downloadButton('downloadData', 'Download')
+    ),
+    mainPanel(
+      tableOutput('table')
+    )
+  )
+)
--- a/inst/examples/11_timer/app.R
+++ b/inst/examples/11_timer/app.R
@@ -1,21 +0,0 @@
-library(shiny)
-
-# Define UI for displaying current time ----
-ui <- fluidPage(
-
-  h2(textOutput("currentTime"))
-
-)
-
-# Define server logic to show current time, update every second ----
-server <- function(input, output, session) {
-
-  output$currentTime <- renderText({
-    invalidateLater(1000, session)
-    paste("The current time is", Sys.time())
-  })
-
-}
-
-# Create Shiny app ----
-shinyApp(ui, server)
--- a/inst/examples/11_timer/server.R
+++ b/inst/examples/11_timer/server.R
@@ -0,0 +1,6 @@
+function(input, output, session) {
+  output$currentTime <- renderText({
+    invalidateLater(1000, session)
+    paste("The current time is", Sys.time())
+  })
+}
--- a/inst/examples/11_timer/ui.R
+++ b/inst/examples/11_timer/ui.R
@@ -0,0 +1,3 @@
+fluidPage(
+  textOutput("currentTime")
+)
--- a/inst/staticdocs/index.r
+++ b/inst/staticdocs/index.r
@@ -57,12 +57,9 @@ sd_section("UI Inputs",
    "updateSelectInput",
    "updateSliderInput",
    "updateTabsetPanel",
-    "insertTab",
-    "showTab",
    "updateTextInput",
    "updateTextAreaInput",
-    "updateQueryString",
-    "getQueryString"
+    "updateQueryString"
  )
 )
 sd_section("UI Outputs",
@@ -124,7 +121,6 @@ sd_section("Reactive programming",
    "reactive",
    "observe",
    "observeEvent",
-    "reactiveVal",
    "reactiveValues",
    "reactiveValuesToList",
    "is.reactivevalues",
@@ -156,8 +152,7 @@ sd_section("Running",
    "runGadget",
    "runUrl",
    "stopApp",
-    "viewer",
-    "isRunning"
+    "viewer"
  )
 )
 sd_section("Bookmarking state",
@@ -196,16 +191,10 @@ sd_section("Utility functions",
    "parseQueryString",
    "plotPNG",
    "exportTestValues",
-    "setSerializer",
-    "snapshotExclude",
-    "snapshotPreprocessInput",
-    "snapshotPreprocessOutput",
-    "markOutputAttrs",
    "repeatable",
    "shinyDeprecated",
    "serverInfo",
-    "shiny-options",
-    "onStop"
+    "shiny-options"
  )
 )
 sd_section("Plot interaction",
--- a/inst/www/shared/babel-polyfill.min.js
+++ b/inst/www/shared/babel-polyfill.min.js
--- a/inst/www/shared/ionrangeslider/css/ion.rangeSlider.css
+++ b/inst/www/shared/ionrangeslider/css/ion.rangeSlider.css
@@ -141,7 +141,6 @@
    line-height: 0 !important;
    padding: 0 !important;
    margin: 0 !important;
-    overflow: hidden;
    outline: none !important;
    z-index: -9999 !important;
    background: none !important;
--- a/inst/www/shared/ionrangeslider/js/ion.rangeSlider.js
+++ b/inst/www/shared/ionrangeslider/js/ion.rangeSlider.js
@@ -1,6 +1,6 @@
-// Ion.RangeSlider
-// version 2.1.6 Build: 369
-// © Denis Ineshin, 2016
+// Ion.RangeSlider
+// version 2.1.2 Build: 350
+// © Denis Ineshin, 2015
 // https://github.com/IonDen
 //
 // Project page:    http://ionden.com/a/plugins/ion.rangeSlider/en.html
@@ -10,17 +10,7 @@
 // http://ionden.com/a/plugins/licence-en.html
 // =====================================================================================================================

-;(function(factory) {
-    if (typeof define === "function" && define.amd) {
-        define(["jquery"], function (jQuery) {
-            return factory(jQuery, document, window, navigator);
-        });
-    } else if (typeof exports === "object") {
-        factory(require("jquery"), document, window, navigator);
-    } else {
-        factory(jQuery, document, window, navigator);
-    }
-} (function ($, document, window, navigator, undefined) {
+;(function ($, document, window, navigator, undefined) {
    "use strict";

    // =================================================================================================================
@@ -156,7 +146,7 @@
     * @constructor
     */
    var IonRangeSlider = function (input, options, plugin_count) {
-        this.VERSION = "2.1.6";
+        this.VERSION = "2.1.2";
        this.input = input;
        this.plugin_count = plugin_count;
        this.current_plugin = 0;
@@ -171,15 +161,12 @@
        this.no_diapason = false;
        this.is_key = false;
        this.is_update = false;
-        this.is_first_update = true;
        this.is_start = true;
        this.is_finish = false;
        this.is_active = false;
        this.is_resize = false;
        this.is_click = false;

-        options = options || {};
-
        // cache for links to all DOM elements
        this.$cache = {
            win: $(window),
@@ -331,11 +318,6 @@
        };


-        // check if base element is input
-        if ($inp[0].nodeName !== "INPUT") {
-            console && console.warn && console.warn("Base element should be <input>!", $inp[0]);
-        }
-

        // config from data-attributes extends js config
        config_from_data = {
@@ -393,15 +375,16 @@

        for (prop in config_from_data) {
            if (config_from_data.hasOwnProperty(prop)) {
-                if (config_from_data[prop] === undefined || config_from_data[prop] === "") {
+                if (!config_from_data[prop] && config_from_data[prop] !== 0) {
                    delete config_from_data[prop];
                }
            }
        }


+
        // input value extends default config
-        if (val !== undefined && val !== "") {
+        if (val) {
            val = val.split(config_from_data.input_values_separator || options.input_values_separator || ";");

            if (val[0] && val[0] == +val[0]) {
@@ -433,7 +416,6 @@


        // validate config, to be sure that all data types are correct
-        this.update_check = {};
        this.validate();


@@ -465,7 +447,7 @@
        /**
         * Starts or updates the plugin instance
         *
-         * @param [is_update] {boolean}
+         * @param is_update {boolean}
         */
        init: function (is_update) {
            this.no_diapason = false;
@@ -752,6 +734,7 @@

            // callbacks call
            if ($.contains(this.$cache.cont[0], e.target) || this.dragging) {
+                this.is_finish = true;
                this.callOnFinish();
            }
            
@@ -778,7 +761,7 @@
            }

            if (!target) {
-                target = this.target || "from";
+                target = this.target;
            }

            this.current_plugin = this.plugin_count;
@@ -965,12 +948,6 @@
            this.calcPointerPercent();
            var handle_x = this.getHandleX();

-
-            if (this.target === "both") {
-                this.coords.p_gap = 0;
-                handle_x = this.getHandleX();
-            }
-
            if (this.target === "click") {
                this.coords.p_gap = this.coords.p_handle / 2;
                handle_x = this.getHandleX();
@@ -1058,7 +1035,7 @@
                        break;
                    }

-                    handle_x = this.toFixed(handle_x + (this.coords.p_handle * 0.001));
+                    handle_x = this.toFixed(handle_x + (this.coords.p_handle * 0.1));

                    this.coords.p_from_real = this.convertToRealPercent(handle_x) - this.coords.p_gap_left;
                    this.coords.p_from_real = this.calcWithStep(this.coords.p_from_real);
@@ -1336,6 +1313,13 @@
                    this.$cache.s_single[0].style.left = this.coords.p_single_fake + "%";

                    this.$cache.single[0].style.left = this.labels.p_single_left + "%";
+
+                    if (this.options.values.length) {
+                        this.$cache.input.prop("value", this.result.from_value);
+                    } else {
+                        this.$cache.input.prop("value", this.result.from);
+                    }
+                    this.$cache.input.data("from", this.result.from);
                } else {
                    this.$cache.s_from[0].style.left = this.coords.p_from_fake + "%";
                    this.$cache.s_to[0].style.left = this.coords.p_to_fake + "%";
@@ -1348,13 +1332,18 @@
                    }

                    this.$cache.single[0].style.left = this.labels.p_single_left + "%";
-                }

-                this.writeToInput();
+                    if (this.options.values.length) {
+                        this.$cache.input.prop("value", this.result.from_value + this.options.input_values_separator + this.result.to_value);
+                    } else {
+                        this.$cache.input.prop("value", this.result.from + this.options.input_values_separator + this.result.to);
+                    }
+                    this.$cache.input.data("from", this.result.from);
+                    this.$cache.input.data("to", this.result.to);
+                }

                if ((this.old_from !== this.result.from || this.old_to !== this.result.to) && !this.is_start) {
                    this.$cache.input.trigger("change");
-                    this.$cache.input.trigger("input");
                }

                this.old_from = this.result.from;
@@ -1364,10 +1353,9 @@
                if (!this.is_resize && !this.is_update && !this.is_start && !this.is_finish) {
                    this.callOnChange();
                }
-                if (this.is_key || this.is_click || this.is_first_update) {
+                if (this.is_key || this.is_click) {
                    this.is_key = false;
                    this.is_click = false;
-                    this.is_first_update = false;
                    this.callOnFinish();
                }

@@ -1479,8 +1467,6 @@
                            this.$cache.from[0].style.visibility = "visible";
                        } else if (this.target === "to") {
                            this.$cache.to[0].style.visibility = "visible";
-                        } else if (!this.target) {
-                            this.$cache.from[0].style.visibility = "visible";
                        }
                        this.$cache.single[0].style.visibility = "hidden";
                        max = to_left;
@@ -1575,57 +1561,25 @@



-        /**
-         * Write values to input element
-         */
-        writeToInput: function () {
-            if (this.options.type === "single") {
-                if (this.options.values.length) {
-                    this.$cache.input.prop("value", this.result.from_value);
-                } else {
-                    this.$cache.input.prop("value", this.result.from);
-                }
-                this.$cache.input.data("from", this.result.from);
-            } else {
-                if (this.options.values.length) {
-                    this.$cache.input.prop("value", this.result.from_value + this.options.input_values_separator + this.result.to_value);
-                } else {
-                    this.$cache.input.prop("value", this.result.from + this.options.input_values_separator + this.result.to);
-                }
-                this.$cache.input.data("from", this.result.from);
-                this.$cache.input.data("to", this.result.to);
-            }
-        },
-
-
-
        // =============================================================================================================
        // Callbacks

        callOnStart: function () {
-            this.writeToInput();
-
            if (this.options.onStart && typeof this.options.onStart === "function") {
                this.options.onStart(this.result);
            }
        },
        callOnChange: function () {
-            this.writeToInput();
-
            if (this.options.onChange && typeof this.options.onChange === "function") {
                this.options.onChange(this.result);
            }
        },
        callOnFinish: function () {
-            this.writeToInput();
-
            if (this.options.onFinish && typeof this.options.onFinish === "function") {
                this.options.onFinish(this.result);
            }
        },
        callOnUpdate: function () {
-            this.writeToInput();
-
            if (this.options.onUpdate && typeof this.options.onUpdate === "function") {
                this.options.onUpdate(this.result);
            }
@@ -1633,7 +1587,6 @@



-
        // =============================================================================================================
        // Service methods

@@ -1843,7 +1796,7 @@
        },

        toFixed: function (num) {
-            num = num.toFixed(20);
+            num = num.toFixed(9);
            return +num;
        },

@@ -1931,36 +1884,31 @@
                o.from = o.min;
            }

-            if (typeof o.to !== "number" || isNaN(o.to)) {
+            if (typeof o.to !== "number" || isNaN(o.from)) {
                o.to = o.max;
            }

            if (o.type === "single") {

-                if (o.from < o.min) o.from = o.min;
-                if (o.from > o.max) o.from = o.max;
+                if (o.from < o.min) {
+                    o.from = o.min;
+                }
+
+                if (o.from > o.max) {
+                    o.from = o.max;
+                }

            } else {

-                if (o.from < o.min) o.from = o.min;
-                if (o.from > o.max) o.from = o.max;
-
-                if (o.to < o.min) o.to = o.min;
-                if (o.to > o.max) o.to = o.max;
-
-                if (this.update_check.from) {
-
-                    if (this.update_check.from !== o.from) {
-                        if (o.from > o.to) o.from = o.to;
-                    }
-                    if (this.update_check.to !== o.to) {
-                        if (o.to < o.from) o.to = o.from;
-                    }
-
+                if (o.from < o.min || o.from > o.max) {
+                    o.from = o.min;
+                }
+                if (o.to > o.max || o.to < o.min) {
+                    o.to = o.max;
+                }
+                if (o.from > o.to) {
+                    o.from = o.to;
                }
-
-                if (o.from > o.to) o.from = o.to;
-                if (o.to < o.from) o.to = o.from;

            }

@@ -2219,10 +2167,7 @@

            for (i = 0; i < num; i++) {
                label = this.$cache.grid_labels[i][0];
-
-                if (this.coords.big_x[i] !== Number.POSITIVE_INFINITY) {
-                    label.style.marginLeft = -this.coords.big_x[i] + "%";
-                }
+                label.style.marginLeft = -this.coords.big_x[i] + "%";
            }
        },

@@ -2284,8 +2229,6 @@

            this.options.from = this.result.from;
            this.options.to = this.result.to;
-            this.update_check.from = this.result.from;
-            this.update_check.to = this.result.to;

            this.options = $.extend(this.options, options);
            this.validate();
@@ -2363,4 +2306,4 @@
            };
    }());

-}));
+} (jQuery, document, window, navigator));
--- a/inst/www/shared/ionrangeslider/js/ion.rangeSlider.min.js
+++ b/inst/www/shared/ionrangeslider/js/ion.rangeSlider.min.js
--- a/inst/www/shared/shiny-showcase.css
+++ b/inst/www/shared/shiny-showcase.css
@@ -6,7 +6,6 @@

 .shiny-code {
  background-color: white;
-  margin-bottom: 0;
 }

 .shiny-code code {
--- a/inst/www/shared/shiny-showcase.js
+++ b/inst/www/shared/shiny-showcase.js
@@ -217,7 +217,7 @@
    var app = document.getElementById("showcase-app-container");
    $(app).animate({
        width: appWidth + "px",
-        zoom: (zoom*100) + "%"
+        zoom: zoom
      }, animate ? animateMs : 0);
  };

--- a/inst/www/shared/shiny.css
+++ b/inst/www/shared/shiny.css
@@ -95,13 +95,6 @@ pre.shiny-text-output.noplaceholder:empty {
  font-weight: inherit;
 }

-/* Work around MS Edge transition bug (issue #1637) */
-@supports (-ms-ime-align:auto) {
-  .shiny-bound-output {
-    transition: 0;
-  }
-}
-
 .recalculating {
  opacity: 0.3;
  transition: opacity 250ms ease 500ms;
@@ -373,11 +366,3 @@ pre.shiny-text-output.noplaceholder:empty {
  text-decoration: underline;
  font-weight: bold;
 }
-
-.shiny-file-input-active {
-  box-shadow: inset 0 1px 1px rgba(0,0,0,.075), 0 0 8px rgba(102, 175, 233, .6);
-}
-
-.shiny-file-input-over {
-  box-shadow: inset 0 1px 1px rgba(0,0,0,.075), 0 0 8px rgba(76, 174, 76, .6);
-}
--- a/inst/www/shared/shiny.js
+++ b/inst/www/shared/shiny.js
--- a/inst/www/shared/shiny.js.map
+++ b/inst/www/shared/shiny.js.map
--- a/inst/www/shared/shiny.min.js
+++ b/inst/www/shared/shiny.min.js
--- a/inst/www/shared/shiny.min.js.map
+++ b/inst/www/shared/shiny.min.js.map
--- a/man/NS.Rd
+++ b/man/NS.Rd
@@ -41,3 +41,4 @@ into a namespaced one, by combining them with \code{ns.sep} in between.
 \url{http://shiny.rstudio.com/articles/modules.html}
 }
 \keyword{datasets}
+
--- a/man/Progress.Rd
+++ b/man/Progress.Rd
@@ -24,7 +24,8 @@ detail message (if any). The detail message will be shown with a
 de-emphasized appearance relative to \code{message}.}

 \item{value}{A numeric value at which to set
-the progress bar, relative to \code{min} and \code{max}.}
+the progress bar, relative to \code{min} and \code{max}.
+\code{NULL} hides the progress bar, if it is currently visible.}

 \item{style}{Progress display style. If \code{"notification"} (the default),
 the progress indicator will show using Shiny's notification API. If
@@ -111,3 +112,4 @@ shinyApp(ui, server)
 \code{\link{withProgress}}
 }
 \keyword{datasets}
+
--- a/man/absolutePanel.Rd
+++ b/man/absolutePanel.Rd
@@ -80,3 +80,4 @@ specify \code{0} for \code{top}, \code{left}, \code{right}, and \code{bottom}
 rather than the more obvious \code{width = "100\%"} and \code{height =
 "100\%"}.
 }
+
--- a/man/actionButton.Rd
+++ b/man/actionButton.Rd
@@ -56,7 +56,7 @@ shinyApp(ui, server)
 \seealso{
 \code{\link{observeEvent}} and \code{\link{eventReactive}}

-Other input elements: \code{\link{checkboxGroupInput}},
+Other input.elements: \code{\link{checkboxGroupInput}},
  \code{\link{checkboxInput}}, \code{\link{dateInput}},
  \code{\link{dateRangeInput}}, \code{\link{fileInput}},
  \code{\link{numericInput}}, \code{\link{passwordInput}},
@@ -64,3 +64,4 @@ Other input elements: \code{\link{checkboxGroupInput}},
  \code{\link{sliderInput}}, \code{\link{submitButton}},
  \code{\link{textAreaInput}}, \code{\link{textInput}}
 }
+
--- a/man/addResourcePath.Rd
+++ b/man/addResourcePath.Rd
@@ -32,3 +32,4 @@ addResourcePath('datasets', system.file('data', package='datasets'))
 \seealso{
 \code{\link{singleton}}
 }
+
--- a/man/applyInputHandlers.Rd
+++ b/man/applyInputHandlers.Rd
@@ -27,3 +27,4 @@ output.
 registerInputHandler
 }
 \keyword{internal}
+
--- a/man/bookmarkButton.Rd
+++ b/man/bookmarkButton.Rd
@@ -70,3 +70,4 @@ shinyApp(ui, server)
 \seealso{
 \code{\link{enableBookmarking}} for more examples.
 }
+
--- a/man/bootstrapLib.Rd
+++ b/man/bootstrapLib.Rd
@@ -21,3 +21,4 @@ It isn't necessary to call this function if you use
 \code{\link{pageWithSidebar}}, and \code{\link{navbarPage}}, because they
 already include the Bootstrap web dependencies.
 }
+
--- a/man/bootstrapPage.Rd
+++ b/man/bootstrapPage.Rd
@@ -1,8 +1,8 @@
 % Generated by roxygen2: do not edit by hand
 % Please edit documentation in R/bootstrap.R
 \name{bootstrapPage}
-\alias{bootstrapPage}
 \alias{basicPage}
+\alias{bootstrapPage}
 \title{Create a Bootstrap page}
 \usage{
 bootstrapPage(..., title = NULL, responsive = NULL, theme = NULL)
@@ -41,3 +41,4 @@ The \code{basicPage} function is deprecated, you should use the
 \seealso{
 \code{\link{fluidPage}}, \code{\link{fixedPage}}
 }
+
--- a/Show More
+++ b/Show More
Author	SHA1	Message	Date
Joe Cheng	417f7f7236	Clean up correctly after API caller leaves	2017-01-12 23:56:10 -05:00
Joe Cheng	c1d92c2767	API: Log errors; automatically print() ggplot2	2017-01-12 23:56:10 -05:00
Joe Cheng	3d2f677e2f	Accept input via JSON POST	2017-01-12 23:56:10 -05:00
Joe Cheng	b15cc6cbc0	API parameters get parsed using JSON semantics This gives us more accurate data types (numbers as ints/reals instead of strings) Also adds serveRaw (raw vectors)	2017-01-12 23:56:10 -05:00
Joe Cheng	4fbb8a436c	Import utils::write.csv	2017-01-12 23:56:10 -05:00
Joe Cheng	308b41b8e8	Improve result handling - Arbitrary httpResponse can now be returned - WebSocket API conn doesn't force everything to JSON	2017-01-12 23:56:10 -05:00
Joe Cheng	516d0cd2ca	Squelch messages	2017-01-12 23:56:10 -05:00
Joe Cheng	f9d8217f90	Better API API :)	2017-01-12 23:56:10 -05:00
Joe Cheng	58ad213a6f	Support plots	2017-01-12 23:56:10 -05:00
Joe Cheng	6ef5c7728e	Fix shared secret check	2017-01-12 23:56:10 -05:00
Joe Cheng	58a5fe9a84	API prototype	2017-01-12 23:56:10 -05:00
Winston Chang	c633c8b7dd	Update URL	2017-01-12 23:56:10 -05:00